Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR627G0937 Trochodendron aralioides HOM05D004354 ORTHO05D005409 6.3e-50 200.3 90 100.0
TAR626G1453 Trochodendron aralioides HOM05D004354 ORTHO05D005409 2.4e-25 118.6 54 90.7
Cc05_g07440 Coffea canephora HOM05D004354 ORTHO05D005409 3.2e-25 118.2 54 92.6
Eucgr.K01043 Eucalyptus grandis HOM05D004354 ORTHO05D005409 7.1e-25 117.1 54 90.7
QL08p039658 Quercus lobata HOM05D004354 ORTHO05D005409 7.1e-25 117.1 54 90.7
Cpa.g.sc83.63 Carica papaya HOM05D004354 ORTHO05D005409 9.2e-25 116.7 54 88.9
Glyma.13G295600 Glycine max HOM05D004354 ORTHO05D005409 2.1e-24 115.5 54 88.9
CiPaw.03G179000 Carya illinoinensis HOM05D004354 ORTHO05D005409 4.6e-24 114.4 54 88.9
Prupe.3G139300 Prunus persica HOM05D004354 ORTHO05D005409 4.6e-24 114.4 54 88.9
arahy.Tifrunner.gnm1.ann1.7S1AZB Arachis hypogaea HOM05D004354 ORTHO05D005409 6.0e-24 114.0 54 88.9
Lj1A714G27 Lonicera japonica HOM05D004354 ORTHO05D005409 6.0e-24 114.0 54 88.9
Manes.13G144800 Manihot esculenta HOM05D004354 ORTHO05D005409 6.0e-24 114.0 54 88.9
arahy.Tifrunner.gnm1.ann1.6AZK3P Arachis hypogaea HOM05D004354 ORTHO05D005409 7.8e-24 113.6 54 88.9
Cfa014637 Carpinus fangiana HOM05D004354 ORTHO05D005409 1.0e-23 113.2 54 87.0
Haze_13201 Corylus avellana HOM05D004354 ORTHO05D005409 1.0e-23 113.2 54 87.0
Dinv04814 Davidia involucrata HOM05D004354 ORTHO05D005409 1.0e-23 113.2 54 88.9
Potri.017G012600 Populus trichocarpa HOM05D004354 ORTHO05D005409 1.0e-23 113.2 54 87.0
Thecc.02G182400 Theobroma cacao HOM05D004354 ORTHO05D005409 1.0e-23 113.2 54 87.0
Medtr4g078525 Medicago truncatula HOM05D004354 ORTHO05D005409 1.3e-23 112.8 54 87.0
TPR.G2846 Trifolium pratense HOM05D004354 ORTHO05D005409 1.3e-23 112.8 54 87.0
vmacro12326 Vaccinium macrocarpon HOM05D004354 ORTHO05D005409 1.3e-23 112.8 54 88.9
GSVIVG01020571001 Vitis vinifera HOM05D004354 ORTHO05D005409 1.3e-23 112.8 54 87.0
Actinidia11091 Actinidia chinensis HOM05D004354 ORTHO05D005409 1.7e-23 112.5 54 85.2
Glyma.12G116100 Glycine max HOM05D004354 ORTHO05D005409 1.7e-23 112.5 62 79.0
RcHm_v2.0_Chr2g0127681 Rosa chinensis HOM05D004354 ORTHO05D005409 1.7e-23 112.5 54 87.0
arahy.Tifrunner.gnm1.ann1.5TEV2E Arachis hypogaea HOM05D004354 ORTHO05D005409 2.3e-23 112.1 54 87.0
CSS0000262 Camellia sinensis var. sinensis HOM05D004354 ORTHO05D005409 2.3e-23 112.1 54 85.2
CSS0014582 Camellia sinensis var. sinensis HOM05D004354 ORTHO05D005409 2.3e-23 112.1 54 85.2
Hma1.2p1_0002F.1_g002080 Hydrangea macrophylla HOM05D004354 ORTHO05D005409 2.3e-23 112.1 54 87.0
PGSC0003DMG400032816 Solanum tuberosum HOM05D004354 ORTHO05D005409 2.3e-23 112.1 54 87.0
COL.COLO4_05947 Corchorus olitorius HOM05D004354 ORTHO05D005409 3.0e-23 111.7 54 85.2
Glyma.06G290800 Glycine max HOM05D004354 ORTHO05D005409 3.0e-23 111.7 62 77.4
Phvul.011G119730 Phaseolus vulgaris HOM05D004354 ORTHO05D005409 3.0e-23 111.7 64 76.6
Rhsim06G0139400 Rhododendron simsii HOM05D004354 ORTHO05D005409 3.0e-23 111.7 54 87.0
Hund01030 Selenicereus undatus HOM05D004354 ORTHO05D005409 3.0e-23 111.7 54 87.0
Aqoxy1G02375 Aquilegia oxysepala HOM05D004354 ORTHO05D005409 3.9e-23 111.3 54 85.2
EL10Ac9g20792 Beta vulgaris HOM05D004354 ORTHO05D005409 3.9e-23 111.3 54 87.0
AUR62033735 Chenopodium quinoa HOM05D004354 ORTHO05D005409 5.1e-23 110.9 54 85.2
Lalb_Chr19g0135191 Lupinus albus HOM05D004354 ORTHO05D005409 5.1e-23 110.9 54 87.0
Phvul.005G102100 Phaseolus vulgaris HOM05D004354 ORTHO05D005409 5.1e-23 110.9 54 83.3
Sc21g0003070 Simmondsia chinensis HOM05D004354 ORTHO05D005409 5.1e-23 110.9 54 85.2
Solyc07g053850.3 Solanum lycopersicum HOM05D004354 ORTHO05D005409 5.1e-23 110.9 54 85.2
Sopen07g027820 Solanum pennellii HOM05D004354 ORTHO05D005409 5.1e-23 110.9 54 85.2
MSTRG.6802 Avicennia marina HOM05D004354 ORTHO05D005409 6.6e-23 110.5 54 83.3
CANSAT64G2319 Cannabis sativa HOM05D004354 ORTHO05D005409 6.6e-23 110.5 54 85.2
Ciclev10014745m.g Citrus clementina HOM05D004354 ORTHO05D005409 6.6e-23 110.5 54 87.0
Lj3g0017215 Lotus japonicus HOM05D004354 ORTHO05D005409 6.6e-23 110.5 54 85.2
Aa31LG8G17560 Aethionema arabicum HOM05D004354 ORTHO05D005409 8.6e-23 110.2 54 83.3
arahy.Tifrunner.gnm1.ann1.SG72Z3 Arachis hypogaea HOM05D004354 ORTHO05D005409 8.6e-23 110.2 53 86.8
Gohir.A03G155600 Gossypium hirsutum HOM05D004354 ORTHO05D005409 8.6e-23 110.2 54 85.2
Gohir.D02G178700 Gossypium hirsutum HOM05D004354 ORTHO05D005409 8.6e-23 110.2 54 85.2
Gorai.005G200400 Gossypium raimondii HOM05D004354 ORTHO05D005409 8.6e-23 110.2 54 85.2
MD09G1244500 Malus domestica HOM05D004354 ORTHO05D005409 8.6e-23 110.2 54 87.0
Ca_18937_v3 Cicer arietinum L. HOM05D004354 ORTHO05D005409 1.1e-22 109.8 54 83.3
PSO675G5152 Papaver somniferum HOM05D004354 ORTHO05D005409 1.1e-22 109.8 54 85.2
Potri.007G139300 Populus trichocarpa HOM05D004354 ORTHO05D005409 1.1e-22 109.8 54 83.3
PGR142G0821 Punica granatum HOM05D004354 ORTHO05D005409 1.1e-22 109.8 54 83.3
Glyma.12G205300 Glycine max HOM05D004354 ORTHO05D005409 1.5e-22 109.4 54 83.3
Solyc12g005470.2 Solanum lycopersicum HOM05D004354 ORTHO05D005409 1.9e-22 109.0 54 83.3
Dinv13394 Davidia involucrata HOM05D004354 ORTHO05D005409 2.5e-22 108.6 54 88.9
FvH4_6g26490 Fragaria vesca HOM05D004354 ORTHO05D005409 2.5e-22 108.6 54 85.2
FAN05G5576 Fragaria x ananassa HOM05D004354 ORTHO05D005409 2.5e-22 108.6 54 85.2
CDE05G0895 Ceratophyllum demersum HOM05D004354 ORTHO05D005409 3.3e-22 108.2 54 79.6
Psat7g168720 Pisum sativum HOM05D004354 ORTHO05D005409 4.3e-22 107.8 55 85.5
Sopen12g001470 Solanum pennellii HOM05D004354 ORTHO05D005409 4.3e-22 107.8 54 81.5
VMungo1080G0203 Vigna mungo HOM05D004354 ORTHO05D005409 4.3e-22 107.8 54 81.5
DCAR_009753 Daucus carota HOM05D004354 ORTHO05D005409 5.6e-22 107.5 54 81.5
FAN02G3736 Fragaria x ananassa HOM05D004354 ORTHO05D005409 5.6e-22 107.5 54 83.3
Lj3g0011593 Lotus japonicus HOM05D004354 ORTHO05D005409 5.6e-22 107.5 54 81.5
Lalb_Chr03g0029541 Lupinus albus HOM05D004354 ORTHO05D005409 5.6e-22 107.5 54 83.3
TWI23G0225 Tripterygium wilfordii HOM05D004354 ORTHO05D005409 5.6e-22 107.5 54 81.5
PSO541G1897 Papaver somniferum HOM05D004354 ORTHO05D005409 7.3e-22 107.1 54 83.3
Lsat_1_v5_gn_4_66820 Lactuca sativa HOM05D004354 ORTHO05D005409 1.2e-21 106.3 54 79.6
Lalb_Chr01g0005151 Lupinus albus HOM05D004354 ORTHO05D005409 1.2e-21 106.3 54 81.5
Peaxi162Scf00008g00611 Petunia axillaris HOM05D004354 ORTHO05D005409 1.2e-21 106.3 54 83.3
Ca_09445_v3 Cicer arietinum L. HOM05D004354 ORTHO05D005409 2.8e-21 105.1 54 79.6
Carub.0007s1237 Capsella rubella HOM05D004354 ORTHO05D005409 3.6e-21 104.8 54 75.9
MBI18_g19626_MAGBIO Magnolia biondii HOM05D004354 ORTHO05D005409 3.6e-21 104.8 54 79.6
Nitab4.5_0001184g0100 Nicotiana tabacum HOM05D004354 ORTHO05D005409 4.7e-21 104.4 54 79.6
TWI59G0686 Tripterygium wilfordii HOM05D004354 ORTHO05D005409 1.4e-20 102.8 54 79.6
ECA234G2175 Erigeron canadensis HOM05D004354 ORTHO05D005409 1.8e-20 102.4 54 77.8
Thhalv10024798m.g Eutrema salsugineum HOM05D004354 ORTHO05D005409 1.8e-20 102.4 54 75.9
HanXRQChr05g0143301 Helianthus annuus HOM05D004354 ORTHO05D005409 3.1e-20 101.7 54 77.8
Aa31LG2G22230 Aethionema arabicum HOM05D004354 ORTHO05D005409 4.0e-20 101.3 54 75.9
CARHR236110 Cardamine hirsuta HOM05D004354 ORTHO05D005409 4.0e-20 101.3 54 79.6
CsaV3_6G015220 Cucumis sativus L. HOM05D004354 ORTHO05D005409 5.2e-20 100.9 54 75.9
Sp7g26330 Schrenkiella parvula HOM05D004354 ORTHO05D005409 5.2e-20 100.9 54 75.9
Sed0007610 Sechium edule HOM05D004354 ORTHO05D005409 5.2e-20 100.9 54 77.8
MELO3C013588.2 Cucumis melo HOM05D004354 ORTHO05D005409 6.8e-20 100.5 54 75.9
MD17G1236500 Malus domestica HOM05D004354 ORTHO05D005409 6.8e-20 100.5 54 83.3
Migut.M00279 Erythranthe guttata HOM05D004354 ORTHO05D005409 8.9e-20 100.1 54 74.1
ATR0763G074 Amborella trichopoda HOM05D004354 ORTHO05D005409 1.2e-19 99.8 54 79.6
Oeu036067.1 Olea europaea HOM05D004354 ORTHO05D005409 1.2e-19 99.8 54 75.9
AT4G28370 Arabidopsis thaliana HOM05D004354 ORTHO05D005409 2.0e-19 99.0 54 72.2
THA.LOC104804057 Tarenaya hassleriana HOM05D004354 ORTHO05D005409 2.0e-19 99.0 54 72.2
unitig_22.g5828 Utricularia gibba HOM05D004354 ORTHO05D005409 3.4e-19 98.2 54 81.5
Carub.0003s3517 Capsella rubella HOM05D004354 ORTHO05D005409 7.6e-19 97.1 54 72.2
Nitab4.5_0006194g0010 Nicotiana tabacum HOM05D004354 ORTHO05D005409 7.6e-19 97.1 54 74.1
Thhalv10002192m.g Eutrema salsugineum HOM05D004354 ORTHO05D005409 9.9e-19 96.7 54 70.4
Sp3g33900 Schrenkiella parvula HOM05D004354 ORTHO05D005409 1.3e-18 96.3 54 70.4
BcaC07g38328 Brassica carinata HOM05D004354 ORTHO05D005409 1.7e-18 95.9 54 70.4
C08p10830 Brassica napus HOM05D004354 ORTHO05D005409 1.7e-18 95.9 54 70.4
BolC8t48758H Brassica oleracea HOM05D004354 ORTHO05D005409 1.7e-18 95.9 54 70.4
Sed0026522 Sechium edule HOM05D004354 ORTHO05D005409 1.7e-18 95.9 54 74.1
SEGI_11328 Sequoiadendron giganteum HOM05D004354 ORTHO05D005409 2.2e-18 95.5 54 70.4
AL7G24220 Arabidopsis lyrata HOM05D004354 ORTHO05D005409 2.9e-18 95.1 54 68.5
BcaB03g12570 Brassica carinata HOM05D004354 ORTHO05D005409 8.4e-18 93.6 54 68.5
A08p20090 Brassica napus HOM05D004354 ORTHO05D005409 8.4e-18 93.6 54 68.5
BraA08t33968Z Brassica rapa HOM05D004354 ORTHO05D005409 8.4e-18 93.6 54 68.5
AT2G20650 Arabidopsis thaliana HOM05D004354 ORTHO05D005409 1.1e-17 93.2 54 68.5
BcaC06g36756 Brassica carinata HOM05D004354 ORTHO05D005409 1.1e-17 93.2 54 66.7
C07p00280 Brassica napus HOM05D004354 ORTHO05D005409 1.1e-17 93.2 54 66.7
BolC7t40478H Brassica oleracea HOM05D004354 ORTHO05D005409 1.1e-17 93.2 54 66.7
BraA07t27805Z Brassica rapa HOM05D004354 ORTHO05D005409 1.1e-17 93.2 54 66.7
AL3G53730 Arabidopsis lyrata HOM05D004354 ORTHO05D005409 1.4e-17 92.8 54 68.5
A07p00120 Brassica napus HOM05D004354 ORTHO05D005409 2.4e-17 92.0 54 64.8
BcaB03g16858 Brassica carinata HOM05D004354 ORTHO05D005409 7.1e-17 90.5 54 64.8
CARHR111300 Cardamine hirsuta HOM05D004354 ORTHO05D005409 7.1e-17 90.5 54 66.7
THA.LOC104824696 Tarenaya hassleriana HOM05D004354 ORTHO05D005409 7.1e-17 90.5 57 71.9
Pp3c18_8870 Physcomitrium patens HOM05D004354 ORTHO05D005409 4.6e-16 87.8 61 62.3
SGA_v2.0_scaffold70G23519 Striga asiatica HOM05D004354 ORTHO05D005409 6.0e-16 87.4 53 64.2
Pp3c21_16510 Physcomitrium patens HOM05D004354 ORTHO05D005409 1.3e-15 86.3 62 61.3
Zm00001eb322160 Zea mays HOM05D004354 ORTHO05D005409 1.3e-15 86.3 54 64.8
SMO351G0175 Selaginella moellendorffii HOM05D004354 ORTHO05D005409 1.9e-14 82.4 62 59.7
Mapoly0093s0076 Marchantia polymorpha HOM05D004354 ORTHO05D005409 7.3e-14 80.5 62 59.7
Nn1g06483 Nelumbo nucifera HOM05D004354 ORTHO05D005409 7.3e-14 80.5 40 85.0
AUR62038896 Chenopodium quinoa HOM05D004354 ORTHO05D005409 6.2e-13 77.4 52 67.3
FAN09G2589 Fragaria x ananassa HOM05D004354 ORTHO05D005409 1.4e-12 76.3 41 80.5
PGSC0003DMG400013734 Solanum tuberosum HOM05D004354 ORTHO05D005409 2.4e-12 75.5 41 75.6
FAN14G3021 Fragaria x ananassa HOM05D004354 ORTHO05D005409 4.0e-12 74.7 40 80.0
Peaxi162Scf01415g00030 Petunia axillaris HOM05D004354 ORTHO05D005409 9.0e-12 73.6 41 73.2
Nitab4.5_0000638g0120 Nicotiana tabacum HOM05D004354 ORTHO05D005409 2.9e-10 68.6 40 75.0
ClCG02G017760 Citrullus lanatus HOM05D004354 ORTHO05D005409 4.9e-10 67.8 41 70.7
CBR_g36920 Chara braunii HOM05D004354 ORTHO05D005409 3.2e-09 65.1 64 48.4


User provided reference genes

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