Gene: Pp3c18_8870

General Information

Structural Information

  • Species Physcomitrium patens
  • Gene Identifier Pp3c18_8870
  • Transcript Identifier Pp3c18_8870V3.3
  • Gene Type Coding gene
  • Location Chr18 : 6273709-6278484 : positive

Gene Family Information

  • ID HOM05D004354
  • #Genes/#Species 164/92
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • name Pp3c18_8870V3.3
  • pacid 32982930
  • alias Phypa_176738
  • alias Phpat.018G029400
  • alias Pp1s19_103V6
  • uniprot A0A2K1J0F4

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009827
ISO
PLAZA Integrative Orthologyplant-type cell wall modification AT4G28370
GO:0048363
ISO
PLAZA Integrative Orthologymucilage pectin metabolic process AT4G28370
GO:0080001
ISO
PLAZA Integrative Orthologymucilage extrusion from seed coat AT4G28370

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004842
ISO
PLAZA Integrative Orthologyubiquitin-protein transferase activity AT4G28370
GO:0008270
ISO
PLAZA Homology (enrichment)zinc ion binding HOM05D004354

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016021
IEA
GOA Databaseintegral component of membrane
GO:0016020
IEA
GOA Databasemembrane
GO:0012505
ISO
PLAZA Integrative Orthologyendomembrane system AT4G28370

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001841 Zinc finger, RING-type
IPR013083 Zinc finger, RING/FYVE/PHD-type
Mapman id Description
19.2.2.1.4.3.8 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-ligase E3 activities.RING-domain E3 ligase activities.E3 ubiquitin ligase (FLY)