Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR627G0912 Trochodendron aralioides HOM05D006724 ORTHO05D008514 9.8e-175 616.7 311 100.0
Dinv14945 Davidia involucrata HOM05D006724 ORTHO05D008514 2.0e-50 203.8 153 67.3
Hma1.2p1_0416F.1_g148420 Hydrangea macrophylla HOM05D006724 ORTHO05D008514 6.4e-41 172.2 146 59.6
Actinidia18778 Actinidia chinensis HOM05D006724 ORTHO05D008514 8.3e-41 171.8 155 60.0
EL10Ac4g08255 Beta vulgaris HOM05D006724 ORTHO05D008514 3.2e-40 169.9 158 58.2
QL08p023685 Quercus lobata HOM05D006724 ORTHO05D008514 6.0e-39 165.6 161 57.8
CSS0014927 Camellia sinensis var. sinensis HOM05D006724 ORTHO05D008514 7.8e-39 165.2 155 58.1
Aqoxy4G00591 Aquilegia oxysepala HOM05D006724 ORTHO05D008514 2.3e-38 163.7 239 41.0
Haze_09388 Corylus avellana HOM05D006724 ORTHO05D008514 5.1e-38 162.5 162 55.6
Rhsim04G0022800 Rhododendron simsii HOM05D006724 ORTHO05D008514 1.5e-37 161.0 156 57.1
Cfa020617 Carpinus fangiana HOM05D006724 ORTHO05D008514 1.9e-37 160.6 162 55.6
Lj8C153G9 Lonicera japonica HOM05D006724 ORTHO05D008514 1.9e-37 160.6 136 59.6
PGSC0003DMG400012400 Solanum tuberosum HOM05D006724 ORTHO05D008514 4.3e-37 159.5 158 51.9
CiPaw.11G166800 Carya illinoinensis HOM05D006724 ORTHO05D008514 5.6e-37 159.1 127 61.4
Sopen07g030980 Solanum pennellii HOM05D006724 ORTHO05D008514 1.2e-36 157.9 158 51.9
Lj3g0025660 Lotus japonicus HOM05D006724 ORTHO05D008514 2.1e-36 157.1 153 58.2
Nitab4.5_0000246g0080 Nicotiana tabacum HOM05D006724 ORTHO05D008514 2.8e-36 156.8 132 56.8
Solyc07g062750.4 Solanum lycopersicum HOM05D006724 ORTHO05D008514 8.1e-36 155.2 132 56.1
CAN.G162.28 Capsicum annuum HOM05D006724 ORTHO05D008514 4.0e-35 152.9 162 50.0
Psat4g169400 Pisum sativum HOM05D006724 ORTHO05D008514 5.2e-35 152.5 152 57.9
Ah.04g164500 Amaranthus hybridus HOM05D006724 ORTHO05D008514 6.8e-35 152.1 153 56.2
Lalb_Chr01g0006641 Lupinus albus HOM05D006724 ORTHO05D008514 6.8e-35 152.1 154 53.9
FAN16G1823 Fragaria x ananassa HOM05D006724 ORTHO05D008514 1.5e-34 151.0 129 58.1
RcHm_v2.0_Chr5g0032321 Rosa chinensis HOM05D006724 ORTHO05D008514 2.0e-34 150.6 143 54.5
FAN21G1177 Fragaria x ananassa HOM05D006724 ORTHO05D008514 3.4e-34 149.8 124 59.7
Lsat_1_v5_gn_9_98661 Lactuca sativa HOM05D006724 ORTHO05D008514 3.4e-34 149.8 155 54.8
Ciclev10010824m.g Citrus clementina HOM05D006724 ORTHO05D008514 7.6e-34 148.7 96 71.9
GSVIVG01014275001 Vitis vinifera HOM05D006724 ORTHO05D008514 9.9e-34 148.3 92 76.1
Hma1.2p1_0416F.1_g148430 Hydrangea macrophylla HOM05D006724 ORTHO05D008514 1.3e-33 147.9 84 79.8
CANSAT35G1416 Cannabis sativa HOM05D006724 ORTHO05D008514 2.9e-33 146.7 168 51.2
TPR.G28169 Trifolium pratense HOM05D006724 ORTHO05D008514 3.8e-33 146.4 123 61.0
Manes.03G104800 Manihot esculenta HOM05D006724 ORTHO05D008514 4.9e-33 146.0 131 55.7
Hund22832 Selenicereus undatus HOM05D006724 ORTHO05D008514 4.9e-33 146.0 143 55.9
FvH4_3g19250 Fragaria vesca HOM05D006724 ORTHO05D008514 1.4e-32 144.4 101 64.4
FAN11G3114 Fragaria x ananassa HOM05D006724 ORTHO05D008514 1.4e-32 144.4 101 64.4
HPP92_003869 Vanilla planifolia HOM05D006724 ORTHO05D008514 1.4e-32 144.4 115 60.0
Sc03g0010250 Simmondsia chinensis HOM05D006724 ORTHO05D008514 2.4e-32 143.7 143 52.4
HPP92_003898 Vanilla planifolia HOM05D006724 ORTHO05D008514 3.2e-32 143.3 145 53.1
Phvul.011G156700 Phaseolus vulgaris HOM05D006724 ORTHO05D008514 4.2e-32 142.9 125 58.4
CsaV3_4G033360 Cucumis sativus L. HOM05D006724 ORTHO05D008514 9.3e-32 141.7 166 46.4
AUR62019487 Chenopodium quinoa HOM05D006724 ORTHO05D008514 2.1e-31 140.6 130 53.8
FAN25G2812 Fragaria x ananassa HOM05D006724 ORTHO05D008514 2.7e-31 140.2 107 61.7
MD11G1255900 Malus domestica HOM05D006724 ORTHO05D008514 2.7e-31 140.2 119 58.0
Duzib213G0893 Durio zibethinus HOM05D006724 ORTHO05D008514 3.5e-31 139.8 122 59.0
Prupe.4G173900 Prunus persica HOM05D006724 ORTHO05D008514 3.5e-31 139.8 150 52.7
HanXRQChr12g0364011 Helianthus annuus HOM05D006724 ORTHO05D008514 4.6e-31 139.4 158 50.6
THA.LOC104818095 Tarenaya hassleriana HOM05D006724 ORTHO05D008514 6.0e-31 139.0 163 49.7
Thecc.07G098800 Theobroma cacao HOM05D006724 ORTHO05D008514 6.0e-31 139.0 138 56.5
Eucgr.F01176 Eucalyptus grandis HOM05D006724 ORTHO05D008514 1.0e-30 138.3 102 62.7
A05p34310 Brassica napus HOM05D006724 ORTHO05D008514 1.3e-30 137.9 117 56.4
Cpa.g.sc80.3 Carica papaya HOM05D006724 ORTHO05D006683 1.3e-30 137.9 144 53.5
ClCG11G017740 Citrullus lanatus HOM05D006724 ORTHO05D008514 1.3e-30 137.9 166 47.0
PSO832G3136 Papaver somniferum HOM05D006724 ORTHO05D008514 1.7e-30 137.5 159 49.1
Oeu019299.2 Olea europaea HOM05D006724 ORTHO05D008514 2.3e-30 137.1 133 54.1
Glyma.06G234800 Glycine max HOM05D006724 ORTHO05D008514 3.0e-30 136.7 139 54.7
Gorai.002G066900 Gossypium raimondii HOM05D006724 ORTHO05D008514 3.0e-30 136.7 139 49.6
Sp3g13350 Schrenkiella parvula HOM05D006724 ORTHO05D008514 3.0e-30 136.7 118 57.6
arahy.Tifrunner.gnm1.ann1.N2BE0G Arachis hypogaea HOM05D006724 ORTHO05D008514 5.1e-30 136.0 146 52.1
Cc05_g11660 Coffea canephora HOM05D006724 ORTHO05D008514 5.1e-30 136.0 109 58.7
Medtr8g061030 Medicago truncatula HOM05D006724 ORTHO05D008514 5.1e-30 136.0 96 67.7
CARHR090120 Cardamine hirsuta HOM05D006724 ORTHO05D008514 6.6e-30 135.6 169 46.7
arahy.Tifrunner.gnm1.ann1.WDE0T2 Arachis hypogaea HOM05D006724 ORTHO05D008514 8.7e-30 135.2 152 50.7
Aa31LG8G2350 Aethionema arabicum HOM05D006724 ORTHO05D008514 1.1e-29 134.8 96 64.6
BraA05t22252Z Brassica rapa HOM05D006724 ORTHO05D008514 1.1e-29 134.8 159 48.4
Carub.0003s1479 Capsella rubella HOM05D006724 ORTHO05D008514 1.1e-29 134.8 96 64.6
MELO3C025618.2 Cucumis melo HOM05D006724 ORTHO05D008514 1.1e-29 134.8 166 45.2
Gohir.D01G047400 Gossypium hirsutum HOM05D006724 ORTHO05D008514 1.5e-29 134.4 128 53.1
AL3G27530 Arabidopsis lyrata HOM05D006724 ORTHO05D008514 1.9e-29 134.0 161 48.4
SGA_v2.0_scaffold34G13794 Striga asiatica HOM05D006724 ORTHO05D008514 1.9e-29 134.0 135 52.6
AT3G15140 Arabidopsis thaliana HOM05D006724 ORTHO05D008514 4.3e-29 132.9 164 45.7
Nn1g04264 Nelumbo nucifera HOM05D006724 ORTHO05D008514 4.3e-29 132.9 80 78.8
Sed0012116 Sechium edule HOM05D006724 ORTHO05D008514 4.3e-29 132.9 148 49.3
Aqoxy4G00685 Aquilegia oxysepala HOM05D006724 ORTHO05D008514 7.3e-29 132.1 96 64.6
C05p52090 Brassica napus HOM05D006724 ORTHO05D008514 7.3e-29 132.1 155 49.0
BolC5t33894H Brassica oleracea HOM05D006724 ORTHO05D008514 7.3e-29 132.1 155 49.0
BcaB06g29538 Brassica carinata HOM05D006724 ORTHO05D008514 9.6e-29 131.7 154 48.7
Potri.011G141300 Populus trichocarpa HOM05D006724 ORTHO05D008514 1.3e-28 131.3 139 48.9
VMungo1127G0638 Vigna mungo HOM05D006724 ORTHO05D008514 2.8e-28 130.2 137 50.4
SalBow8G1625 Salvia bowleyana HOM05D006724 ORTHO05D008514 3.6e-28 129.8 91 63.7
DCAR_017120 Daucus carota HOM05D006724 ORTHO05D008514 1.4e-27 127.9 158 49.4
Migut.M00774 Erythranthe guttata HOM05D006724 ORTHO05D008514 1.8e-27 127.5 163 46.6
Os06g0353400 Oryza sativa ssp. japonica HOM05D006724 ORTHO05D008514 1.8e-27 127.5 161 48.4
PGR083G0421 Punica granatum HOM05D006724 ORTHO05D008514 2.4e-27 127.1 133 47.4
MSTRG.15243 Avicennia marina HOM05D006724 ORTHO05D008514 5.3e-27 125.9 94 62.8
unitig_85.g27410 Utricularia gibba HOM05D006724 ORTHO05D008514 1.2e-26 124.8 154 46.1
Sabra11G0126900 Salix brachista HOM05D006724 ORTHO05D008514 3.8e-25 119.8 111 53.2
Nitab4.5_0000831g0090 Nicotiana tabacum HOM05D006724 ORTHO05D008514 8.4e-25 118.6 132 48.5
Peaxi162Scf00069g01835 Petunia axillaris HOM05D006724 ORTHO05D008514 5.1e-22 109.4 80 63.8
DCAR_013127 Daucus carota HOM05D006724 ORTHO05D008514 2.5e-21 107.1 86 58.1
vmacro09520 Vaccinium macrocarpon HOM05D006724 ORTHO05D008514 7.3e-21 105.5 83 65.1
AUR62036149 Chenopodium quinoa HOM05D006724 ORTHO05D008514 1.3e-20 104.8 85 57.6
Atru.chr2.2388 Acer truncatum HOM05D006724 ORTHO05D008514 2.1e-20 104.0 80 67.5
Pp3c27_5050 Physcomitrium patens HOM05D006724 ORTHO05D008514 2.1e-20 104.0 97 52.6
arahy.Tifrunner.gnm1.ann1.E3N302 Arachis hypogaea HOM05D006724 ORTHO05D008514 6.2e-20 102.4 82 59.8
DCAR_017097 Daucus carota HOM05D006724 ORTHO05D008514 8.1e-20 102.1 94 51.1
Ca_07350_v3 Cicer arietinum L. HOM05D006724 ORTHO05D008514 1.8e-19 100.9 103 56.3
AagrBONN_evm.TU.Sc2ySwM_340.295 Anthoceros agrestis HOM05D006724 ORTHO05D008514 3.1e-19 100.1 119 46.2
arahy.Tifrunner.gnm1.ann1.60K44K Arachis hypogaea HOM05D006724 ORTHO05D008514 5.3e-19 99.4 80 61.2
TWI32G0858 Tripterygium wilfordii HOM05D006724 ORTHO05D008514 9.0e-19 98.6 114 48.2
CBR_g4826 Chara braunii HOM05D000829 ORTHO05D008514 2.0e-18 97.4 90 47.8
Mapoly0005s0020 Marchantia polymorpha HOM05D006724 ORTHO05D008514 3.4e-18 96.7 125 40.8
SMO367G0863 Selaginella moellendorffii HOM05D006724 ORTHO05D008514 9.9e-18 95.1 88 56.8
ECA240G0540 Erigeron canadensis HOM05D006724 ORTHO05D008514 1.3e-17 94.7 73 65.8
CDE08G0827 Ceratophyllum demersum HOM05D006724 ORTHO05D008514 4.9e-17 92.8 80 53.8
unitig_86.g29839 Utricularia gibba HOM05D006724 ORTHO05D008514 1.0e-14 85.1 67 58.2
Zm00001eb281480 Zea mays HOM05D006724 ORTHO05D008514 8.7e-14 82.0 72 52.8
Gohir.A01G060932 Gossypium hirsutum HOM05D006724 ORTHO05D008514 7.4e-13 79.0 119 42.9
DCAR_013126 Daucus carota HOM05D006724 ORTHO05D008514 6.9e-11 72.4 72 50.0
Gohir.A01G060866 Gossypium hirsutum HOM05D006724 ORTHO05D008514 1.0e-06 58.5 44 61.4


User provided reference genes

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