Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR627G0524 Trochodendron aralioides HOM05D002338 ORTHO05D006102 2.3e-128 462.2 231 100.0
TAR698G0001 Trochodendron aralioides HOM05D002338 ORTHO05D006102 6.3e-126 454.1 228 99.1
Nn1g04395 Nelumbo nucifera HOM05D002338 ORTHO05D006102 5.4e-85 318.2 225 70.2
Dinv32217 Davidia involucrata HOM05D002338 ORTHO05D006102 1.2e-84 317.0 228 64.0
Hma1.2p1_0987F.1_g244570 Hydrangea macrophylla HOM05D002338 ORTHO05D006102 4.5e-84 315.1 228 63.2
Cc02_g14860 Coffea canephora HOM05D002338 ORTHO05D006102 2.3e-80 302.8 228 61.8
Oeu030709.1 Olea europaea HOM05D002338 ORTHO05D006102 2.3e-80 302.8 228 62.7
SalBow4G0953 Salvia bowleyana HOM05D002338 ORTHO05D006102 4.4e-79 298.5 225 62.2
Peaxi162Scf00753g00411 Petunia axillaris HOM05D002338 ORTHO05D006102 9.8e-79 297.4 228 59.2
GSVIVG01026940001 Vitis vinifera HOM05D002338 ORTHO05D006102 1.7e-78 296.6 228 60.5
Lj1P636T28 Lonicera japonica HOM05D002338 ORTHO05D006102 2.8e-78 295.8 225 60.4
MSTRG.7403 Avicennia marina HOM05D002338 ORTHO05D006102 4.9e-78 295.0 228 59.2
Migut.H00865 Erythranthe guttata HOM05D002338 ORTHO05D006102 2.3e-75 286.2 228 57.9
Aqoxy1G02082 Aquilegia oxysepala HOM05D002338 ORTHO05D006102 5.0e-75 285.0 230 58.7
GSVIVG01021206001 Vitis vinifera HOM05D002338 ORTHO05D006102 1.1e-74 283.9 228 57.9
ClCG03G007760 Citrullus lanatus HOM05D002338 ORTHO05D006102 2.1e-73 279.6 228 58.3
CsaV3_1G033380 Cucumis sativus L. HOM05D002338 ORTHO05D006102 1.0e-72 277.3 228 58.8
MELO3C002646.2 Cucumis melo HOM05D002338 ORTHO05D006102 2.6e-71 272.7 228 57.5
QL05p046957 Quercus lobata HOM05D002338 ORTHO05D006102 5.8e-71 271.6 229 55.5
Prupe.4G060500 Prunus persica HOM05D002338 ORTHO05D006102 1.7e-70 270.0 225 59.1
CAN.G943.27 Capsicum annuum HOM05D002338 ORTHO05D006102 3.7e-70 268.9 228 55.7
SGA_v2.0_scaffold1G00039 Striga asiatica HOM05D002338 ORTHO05D006102 4.9e-70 268.5 228 54.8
CSS0032914 Camellia sinensis var. sinensis HOM05D002338 ORTHO05D006102 6.4e-70 268.1 228 53.5
PGSC0003DMG400004381 Solanum tuberosum HOM05D002338 ORTHO05D006102 8.3e-70 267.7 228 56.1
Sed0024643 Sechium edule HOM05D002338 ORTHO05D006102 1.1e-69 267.3 228 57.0
AUR62036936 Chenopodium quinoa HOM05D002338 ORTHO05D006102 1.9e-69 266.5 223 55.2
AUR62031197 Chenopodium quinoa HOM05D002338 ORTHO05D006102 2.4e-69 266.2 223 54.3
Sopen03g002200 Solanum pennellii HOM05D002338 ORTHO05D006102 2.4e-69 266.2 228 56.1
CSS0007657 Camellia sinensis var. sinensis HOM05D002338 ORTHO05D006102 3.2e-69 265.8 228 53.5
unitig_736.g22955 Utricularia gibba HOM05D002338 ORTHO05D006102 1.6e-68 263.5 228 53.1
EL10Ac8g20603 Beta vulgaris HOM05D002338 ORTHO05D006102 2.7e-68 262.7 228 54.4
AUR62027671 Chenopodium quinoa HOM05D002338 ORTHO05D006102 3.5e-68 262.3 223 54.3
Ciclev10031207m.g Citrus clementina HOM05D002338 ORTHO05D006102 7.8e-68 261.2 224 55.4
DCAR_005225 Daucus carota HOM05D002338 ORTHO05D006102 1.0e-67 260.8 228 53.5
Manes.06G033800 Manihot esculenta HOM05D002338 ORTHO05D006102 1.0e-67 260.8 223 52.5
Lalb_Chr18g0054471 Lupinus albus HOM05D002338 ORTHO05D006102 3.0e-67 259.2 231 53.2
Glyma.01G042900 Glycine max HOM05D002338 ORTHO05D006102 3.9e-67 258.8 230 53.0
Rhsim13G0190300 Rhododendron simsii HOM05D002338 ORTHO05D006102 6.6e-67 258.1 228 53.9
Rhsim09G0087800 Rhododendron simsii HOM05D002338 ORTHO05D006102 2.5e-66 256.1 228 53.9
Phvul.002G066000 Phaseolus vulgaris HOM05D002338 ORTHO05D006102 1.6e-65 253.4 227 52.4
Ah.09g233540 Amaranthus hybridus HOM05D002338 ORTHO05D006102 2.8e-65 252.7 223 50.7
arahy.Tifrunner.gnm1.ann1.2YH6BX Arachis hypogaea HOM05D002338 ORTHO05D006706 3.6e-65 252.3 230 53.0
Cfa000603 Carpinus fangiana HOM05D002338 ORTHO05D006102 6.2e-65 251.5 230 51.7
RcHm_v2.0_Chr5g0010711 Rosa chinensis HOM05D002338 ORTHO05D006102 8.0e-65 251.1 225 52.9
CiPaw.10G058500 Carya illinoinensis HOM05D002338 ORTHO05D006102 1.1e-64 250.8 229 54.6
VMungo1215G0129 Vigna mungo HOM05D002338 ORTHO05D006102 1.1e-64 250.8 228 52.2
Lj6g0008317 Lotus japonicus HOM05D002338 ORTHO05D006102 2.0e-63 246.5 231 51.1
Haze_06238 Corylus avellana HOM05D002338 ORTHO05D006102 3.4e-63 245.7 231 51.1
MD05G1301900 Malus domestica HOM05D002338 ORTHO05D006102 3.4e-63 245.7 226 55.8
Ca_00873_v3 Cicer arietinum L. HOM05D002338 ORTHO05D006102 9.8e-63 244.2 228 50.4
MBI18_g09632_MAGBIO Magnolia biondii HOM05D002338 ORTHO05D006102 2.2e-62 243.0 227 50.7
Medtr2g031410 Medicago truncatula HOM05D002338 ORTHO05D006102 2.2e-62 243.0 231 49.8
CDE02G4213 Ceratophyllum demersum HOM05D002338 ORTHO05D006102 4.9e-62 241.9 242 51.7
Atru.chr2.3891 Acer truncatum HOM05D002338 ORTHO05D006102 1.4e-61 240.4 224 51.3
Lj2A298G34 Lonicera japonica HOM05D002338 ORTHO05D006102 2.4e-61 239.6 176 62.5
PGR004G1505 Punica granatum HOM05D002338 ORTHO05D006102 4.1e-61 238.8 228 49.1
SHI24483 Sapria himalayana HOM05D002338 ORTHO05D006102 2.7e-60 236.1 222 48.6
FvH4_6g24910 Fragaria vesca HOM05D002338 ORTHO05D006102 3.5e-60 235.7 225 49.3
FAN02G0479 Fragaria x ananassa HOM05D002338 ORTHO05D006102 3.5e-60 235.7 225 49.3
FAN14G3958 Fragaria x ananassa HOM05D002338 ORTHO05D006102 4.6e-60 235.3 225 49.3
FAN05G1035 Fragaria x ananassa HOM05D002338 ORTHO05D006102 6.0e-60 235.0 225 48.9
FAN05G5039 Fragaria x ananassa HOM05D002338 ORTHO05D006102 6.0e-60 235.0 225 48.9
Cpa.g.sc7.51 Carica papaya HOM05D002338 ORTHO05D006102 7.8e-60 234.6 222 48.6
PSO675G9291 Papaver somniferum HOM05D002338 ORTHO05D006102 1.3e-59 233.8 227 52.0
TPR.G22268 Trifolium pratense HOM05D002338 ORTHO05D006102 2.3e-59 233.0 231 48.5
PSO541G5199 Papaver somniferum HOM05D002338 ORTHO05D006102 3.0e-59 232.6 227 52.0
HanXRQChr16g0518871 Helianthus annuus HOM05D002338 ORTHO05D006102 2.5e-58 229.6 224 52.2
HanXRQChr16g0517751 Helianthus annuus HOM05D002338 ORTHO05D006102 3.3e-58 229.2 225 51.1
THA.LOC104827541 Tarenaya hassleriana HOM05D002338 ORTHO05D006102 3.3e-58 229.2 221 49.3
Lsat_1_v5_gn_4_49520 Lactuca sativa HOM05D002338 ORTHO05D006102 5.6e-58 228.4 224 50.4
Aa31LG6G12510 Aethionema arabicum HOM05D002338 ORTHO05D006102 1.2e-57 227.3 222 48.2
Sabra04G0055900 Salix brachista HOM05D002338 ORTHO05D006102 1.6e-57 226.9 226 49.6
Duzib138G0048 Durio zibethinus HOM05D002338 ORTHO05D006102 2.1e-57 226.5 219 49.8
HanXRQChr16g0520661 Helianthus annuus HOM05D002338 ORTHO05D006102 2.8e-57 226.1 224 51.8
Potri.004G084700 Populus trichocarpa HOM05D002338 ORTHO05D006102 4.7e-57 225.3 226 50.0
THA.LOC104826474 Tarenaya hassleriana HOM05D002338 ORTHO05D006102 4.7e-57 225.3 223 48.0
AL7G15620 Arabidopsis lyrata HOM05D002338 ORTHO05D006102 8.1e-57 224.6 222 46.4
Sp7g33320 Schrenkiella parvula HOM05D002338 ORTHO05D006102 1.1e-56 224.2 222 48.6
Sabra04G0094200 Salix brachista HOM05D002338 ORTHO05D006102 8.9e-56 221.1 226 49.1
BraA01t00291Z Brassica rapa HOM05D002338 ORTHO05D006102 1.2e-55 220.7 222 46.4
CSS0032678 Camellia sinensis var. sinensis HOM05D002338 ORTHO05D006102 1.2e-55 220.7 228 46.9
AT4G35540 Arabidopsis thaliana HOM05D002338 ORTHO05D006102 1.5e-55 220.3 222 45.9
A01p03070 Brassica napus HOM05D002338 ORTHO05D006102 9.9e-55 217.6 222 45.5
Migut.M01042 Erythranthe guttata HOM05D002338 ORTHO05D006102 1.3e-54 217.2 203 51.2
Gorai.007G174700 Gossypium raimondii HOM05D002338 ORTHO05D006102 1.7e-54 216.9 219 47.5
Gohir.D11G163900 Gossypium hirsutum HOM05D002338 ORTHO05D006102 2.9e-54 216.1 219 47.0
CANSAT54G0294 Cannabis sativa HOM05D002338 ORTHO05D006102 3.7e-54 215.7 228 48.2
Gohir.A11G156900 Gossypium hirsutum HOM05D002338 ORTHO05D006102 1.1e-53 214.2 219 46.6
ECA247G1464 Erigeron canadensis HOM05D002338 ORTHO05D006102 1.4e-53 213.8 222 47.3
BcaNung00583 Brassica carinata HOM05D002338 ORTHO05D006102 1.9e-53 213.4 222 44.1
C01p03420 Brassica napus HOM05D002338 ORTHO05D006102 1.9e-53 213.4 222 44.1
BolC1t00329H Brassica oleracea HOM05D002338 ORTHO05D006102 1.9e-53 213.4 222 44.1
CARHR243880 Cardamine hirsuta HOM05D002338 ORTHO05D006102 3.2e-53 212.6 223 44.8
Atru.chr10.1675 Acer truncatum HOM05D002338 ORTHO05D006102 5.1e-51 205.3 224 45.1
BcaB03g12416 Brassica carinata HOM05D002338 ORTHO05D006102 6.6e-51 204.9 222 42.8
Thhalv10027569m.g Eutrema salsugineum HOM05D002338 ORTHO05D006102 9.5e-50 201.1 223 45.3
CSS0015305 Camellia sinensis var. sinensis HOM05D002338 ORTHO05D006102 1.1e-48 197.6 230 43.9
COL.COLO4_08893 Corchorus olitorius HOM05D002338 ORTHO05D006102 1.2e-47 194.1 220 45.0
Nn3g21334 Nelumbo nucifera HOM05D002338 ORTHO05D006102 1.5e-47 193.7 128 71.1
TWI38G1256 Tripterygium wilfordii HOM05D002338 ORTHO05D006102 2.0e-47 193.4 145 60.0
FAN16G2383 Fragaria x ananassa HOM05D002338 ORTHO05D006102 9.9e-47 191.0 190 50.5
ATR0794G026 Amborella trichopoda HOM05D002338 ORTHO05D006102 1.1e-45 187.6 243 40.7
DCAR_030917 Daucus carota HOM05D002338 ORTHO05D006102 4.2e-45 185.7 228 42.1
Glyma.04G157100 Glycine max HOM05D002338 ORTHO05D006102 9.2e-45 184.5 230 42.6
Oeu017495.1 Olea europaea HOM05D002338 ORTHO05D006102 5.1e-43 178.7 188 47.3
BcaNung03635 Brassica carinata HOM05D002338 ORTHO05D006102 1.1e-42 177.6 197 41.6
SEGI_17381 Sequoiadendron giganteum HOM05D002338 ORTHO05D006102 1.1e-40 171.0 246 39.8
Nitab4.5_0007975g0050 Nicotiana tabacum HOM05D002338 ORTHO05D006102 6.4e-38 161.8 226 39.4
Nitab4.5_0002076g0140 Nicotiana tabacum HOM05D002338 ORTHO05D006102 7.1e-37 158.3 225 39.1
Thecc.01G169900 Theobroma cacao HOM05D002338 ORTHO05D006102 7.1e-37 158.3 138 53.6
Pp3c3_11130 Physcomitrium patens HOM05D002338 ORTHO05D006102 2.8e-33 146.4 239 38.1
Mapoly0022s0109 Marchantia polymorpha HOM05D002338 ORTHO05D006102 3.2e-29 132.9 248 30.6
SMO137G0058 Selaginella moellendorffii HOM05D002338 ORTHO05D006102 8.7e-27 124.8 235 31.9
AagrBONN_evm.TU.Sc2ySwM_228.3636 Anthoceros agrestis HOM05D002338 ORTHO05D006102 4.8e-25 119.0 244 32.4
Zm00001eb175250 Zea mays HOM05D002338 ORTHO05D006102 1.4e-24 117.5 224 34.8
Sc05g0007130 Simmondsia chinensis HOM05D002338 ORTHO05D006102 1.8e-24 117.1 138 44.2
BcaC01g00499 Brassica carinata HOM05D002338 ORTHO05D006102 3.5e-20 102.8 172 32.6
HanXRQChr16g0518151 Helianthus annuus HOM05D002338 ORTHO05D006102 5.1e-19 99.0 86 57.0
HPP92_006302 Vanilla planifolia HOM05D002338 ORTHO05D006102 5.1e-19 99.0 94 46.8
BcaNung03636 Brassica carinata HOM05D002338 ORTHO05D006102 2.8e-17 93.2 105 41.0
FvH4_3g07850 Fragaria vesca HOM05D009570 ORTHO05D009451 9.3e-13 78.2 91 38.5
CBR_g34074 Chara braunii HOM05D000019 ORTHO05D000002 1.3e-09 67.8 101 33.7
Psat1g166240 Pisum sativum HOM05D002338 ORTHO05D006102 2.8e-09 66.6 59 47.5
FAN06G1043 Fragaria x ananassa HOM05D002338 ORTHO05D006102 3.7e-09 66.2 89 39.3
TPR.G39999 Trifolium pratense HOM05D002338 ORTHO05D006102 1.1e-08 64.7 61 42.6
Actinidia16798 Actinidia chinensis HOM05D002338 ORTHO05D006102 7.7e-07 58.5 43 60.5
ATR0794G076 Amborella trichopoda HOM05D002338 ORTHO05D006102 2.2e-06 57.0 56 46.4
FAN10G3983 Fragaria x ananassa HOM05D002338 ORTHO05D006102 2.2e-06 57.0 61 39.3


User provided reference genes

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