Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR627G0163 Trochodendron aralioides HOM05D006818 ORTHO05D008674 2.1e-191 672.2 330 100.0
Dinv22282 Davidia involucrata HOM05D006818 ORTHO05D008674 1.7e-153 546.2 331 80.7
QL08p012092 Quercus lobata HOM05D006818 ORTHO05D008674 6.0e-146 521.2 332 78.3
Manes.15G074101 Manihot esculenta HOM05D006818 ORTHO05D008674 5.6e-144 514.6 336 77.1
Ciclev10008835m.g Citrus clementina HOM05D006818 ORTHO05D008674 7.3e-144 514.2 335 76.1
QL08p011921 Quercus lobata HOM05D006818 ORTHO05D008674 7.3e-144 514.2 333 76.9
Thecc.07G044200 Theobroma cacao HOM05D006818 ORTHO05D008674 2.3e-142 509.2 315 78.1
GSVIVG01001999001 Vitis vinifera HOM05D006818 ORTHO05D008674 5.2e-142 508.1 316 78.5
Nn1g07100 Nelumbo nucifera HOM05D006818 ORTHO05D008674 1.2e-141 506.9 339 75.2
CSS0009238 Camellia sinensis var. sinensis HOM05D006818 ORTHO05D008674 1.5e-141 506.5 331 76.1
Haze_09645 Corylus avellana HOM05D006818 ORTHO05D008674 4.4e-141 505.0 332 75.0
Duzib213G0630 Durio zibethinus HOM05D006818 ORTHO05D008674 9.8e-141 503.8 333 75.7
COL.COLO4_09629 Corchorus olitorius HOM05D006818 ORTHO05D008674 8.3e-140 500.7 336 75.0
Gohir.A01G077200 Gossypium hirsutum HOM05D006818 ORTHO05D008674 8.3e-140 500.7 333 75.1
Lj8A167T47 Lonicera japonica HOM05D006818 ORTHO05D008674 1.9e-139 499.6 328 75.9
MBI18_g06645_MAGBIO Magnolia biondii HOM05D006818 ORTHO05D008674 1.9e-139 499.6 334 75.1
Phvul.008G265400 Phaseolus vulgaris HOM05D006818 ORTHO05D008674 4.1e-139 498.4 333 73.3
Rhsim06G0214800 Rhododendron simsii HOM05D006818 ORTHO05D008674 5.4e-139 498.0 333 73.6
Gohir.D01G064700 Gossypium hirsutum HOM05D006818 ORTHO05D008674 1.2e-138 496.9 333 74.8
Gorai.002G085600 Gossypium raimondii HOM05D006818 ORTHO05D008674 2.7e-138 495.7 333 74.8
VMungo0647G1753 Vigna mungo HOM05D006818 ORTHO05D008674 3.5e-138 495.4 333 72.7
TWI39G0401 Tripterygium wilfordii HOM05D006818 ORTHO05D008674 6.0e-138 494.6 333 73.0
Cpa.g.sc97.37 Carica papaya HOM05D006818 ORTHO05D008674 7.8e-138 494.2 328 73.5
CANSAT25G1970 Cannabis sativa HOM05D006818 ORTHO05D008674 1.0e-137 493.8 304 77.6
MSTRG.6906 Avicennia marina HOM05D006818 ORTHO05D008674 1.7e-137 493.0 327 73.7
Ca_06305_v3 Cicer arietinum L. HOM05D006818 ORTHO05D008674 2.3e-137 492.7 330 73.9
LjContig00308g0005180 Lotus japonicus HOM05D006818 ORTHO05D008674 5.1e-137 491.5 332 72.9
Lalb_Chr04g0248591 Lupinus albus HOM05D006818 ORTHO05D008674 6.6e-137 491.1 332 73.5
Aqoxy1G03627 Aquilegia oxysepala HOM05D006818 ORTHO05D008674 8.6e-137 490.7 331 72.2
CiPaw.11G186900 Carya illinoinensis HOM05D006818 ORTHO05D008674 8.6e-137 490.7 332 73.5
Nitab4.5_0000653g0090 Nicotiana tabacum HOM05D006818 ORTHO05D008674 1.1e-136 490.3 328 74.4
Peaxi162Scf01097g00023 Petunia axillaris HOM05D006818 ORTHO05D008674 1.1e-136 490.3 327 74.0
Glyma.02G289400 Glycine max HOM05D006818 ORTHO05D008674 1.5e-136 490.0 331 72.8
Glyma.14G025600 Glycine max HOM05D006818 ORTHO05D008674 4.3e-136 488.4 332 72.9
RcHm_v2.0_Chr5g0037981 Rosa chinensis HOM05D006818 ORTHO05D008674 5.6e-136 488.0 331 73.1
FvH4_3g22121 Fragaria vesca HOM05D006818 ORTHO05D008674 8.1e-135 484.2 334 72.2
Eucgr.F03445 Eucalyptus grandis HOM05D006818 ORTHO05D008674 5.2e-134 481.5 330 70.9
MD11G1222300 Malus domestica HOM05D006818 ORTHO05D008674 5.2e-134 481.5 331 72.2
Sc06g0005170 Simmondsia chinensis HOM05D006818 ORTHO05D008674 3.4e-133 478.8 327 72.5
PGR031G1507 Punica granatum HOM05D006818 ORTHO05D008674 4.4e-133 478.4 333 71.2
Atru.chr2.3275 Acer truncatum HOM05D006818 ORTHO05D008674 7.5e-133 477.6 316 73.7
Nitab4.5_0000749g0100 Nicotiana tabacum HOM05D006818 ORTHO05D008674 7.5e-133 477.6 318 75.2
Medtr5g092080 Medicago truncatula HOM05D006818 ORTHO05D008674 1.7e-132 476.5 338 71.0
Solyc12g005180.2 Solanum lycopersicum HOM05D006818 ORTHO05D008674 2.2e-132 476.1 328 71.6
Sopen12g001170 Solanum pennellii HOM05D006818 ORTHO05D008674 2.2e-132 476.1 331 71.6
Oeu005459.1 Olea europaea HOM05D006818 ORTHO05D008674 2.9e-132 475.7 303 76.6
Prupe.4G208600 Prunus persica HOM05D006818 ORTHO05D008674 8.3e-132 474.2 313 73.5
Potri.001G420800 Populus trichocarpa HOM05D006818 ORTHO05D008674 1.9e-131 473.0 327 71.6
MELO3C018077.2 Cucumis melo HOM05D006818 ORTHO05D008674 9.2e-131 470.7 331 71.0
ClCG05G014460 Citrullus lanatus HOM05D006818 ORTHO05D008674 1.2e-130 470.3 334 70.7
CsaV3_3G023260 Cucumis sativus L. HOM05D006818 ORTHO05D008674 3.5e-130 468.8 313 73.5
Psat2g015280 Pisum sativum HOM05D006818 ORTHO05D008674 2.3e-129 466.1 333 71.2
Ah.06g195870 Amaranthus hybridus HOM05D006818 ORTHO05D008674 3.9e-129 465.3 326 70.6
CAN.G315.6 Capsicum annuum HOM05D006818 ORTHO05D008674 1.5e-128 463.4 327 71.3
Sabra16G0285700 Salix brachista HOM05D006818 ORTHO05D008674 1.9e-128 463.0 345 68.7
Sed0006226 Sechium edule HOM05D006818 ORTHO05D008674 2.5e-128 462.6 313 72.5
Lsat_1_v5_gn_7_109080 Lactuca sativa HOM05D006818 ORTHO05D008674 6.2e-127 458.0 323 69.3
FAN11G0521 Fragaria x ananassa HOM05D006818 ORTHO05D008674 8.1e-127 457.6 293 74.7
ECA236G4406 Erigeron canadensis HOM05D006818 ORTHO05D008674 2.4e-126 456.1 307 72.3
EL10Ac4g09438 Beta vulgaris HOM05D006818 ORTHO05D008674 4.0e-126 455.3 346 65.9
FAN16G0093 Fragaria x ananassa HOM05D006818 ORTHO05D008674 4.0e-126 455.3 260 82.3
Cc05_g13490 Coffea canephora HOM05D006818 ORTHO05D008674 5.2e-126 454.9 322 68.9
Migut.M01786 Erythranthe guttata HOM05D006818 ORTHO05D008674 2.0e-125 453.0 331 69.2
PSO210G7832 Papaver somniferum HOM05D006818 ORTHO05D008674 2.0e-125 453.0 336 67.9
CDE01G0156 Ceratophyllum demersum HOM05D006818 ORTHO05D008674 3.4e-125 452.2 331 67.4
PSO832G0412 Papaver somniferum HOM05D006818 ORTHO05D008674 2.2e-124 449.5 334 67.1
SGA_v2.0_scaffold80G25946 Striga asiatica HOM05D006818 ORTHO05D008674 1.1e-123 447.2 329 67.8
HanXRQChr15g0494291 Helianthus annuus HOM05D006818 ORTHO05D008674 3.2e-123 445.7 330 69.1
DCAR_022551 Daucus carota HOM05D006818 ORTHO05D008674 4.2e-123 445.3 333 68.2
Carub.0005s1401 Capsella rubella HOM05D006818 ORTHO05D008674 5.4e-123 444.9 312 68.9
Hund07318 Selenicereus undatus HOM05D006818 ORTHO05D008674 5.4e-123 444.9 330 66.7
Thhalv10010497m.g Eutrema salsugineum HOM05D006818 ORTHO05D008674 2.7e-122 442.6 315 68.3
PGSC0003DMG400001099 Solanum tuberosum HOM05D006818 ORTHO05D008674 3.5e-122 442.2 268 79.5
arahy.Tifrunner.gnm1.ann1.37S2BM Arachis hypogaea HOM05D006818 ORTHO05D008674 6.0e-122 441.4 336 68.2
arahy.Tifrunner.gnm1.ann1.D1ZW30 Arachis hypogaea HOM05D006818 ORTHO05D008674 1.0e-121 440.7 336 67.9
SpUn0103_0020 Schrenkiella parvula HOM05D006818 ORTHO05D008674 3.9e-121 438.7 314 68.5
ATR0752G046 Amborella trichopoda HOM05D006818 ORTHO05D008674 5.1e-121 438.3 274 76.6
BcaB02g10686 Brassica carinata HOM05D006818 ORTHO05D008674 1.1e-120 437.2 316 66.8
QL08p012107 Quercus lobata HOM05D006818 ORTHO05D008674 1.1e-120 437.2 245 83.7
A06p27360 Brassica napus HOM05D006818 ORTHO05D008674 1.5e-120 436.8 304 68.1
BraA06t25672Z Brassica rapa HOM05D006818 ORTHO05D008674 1.5e-120 436.8 304 68.1
AL5G27200 Arabidopsis lyrata HOM05D006818 ORTHO05D008674 2.5e-120 436.0 318 66.0
BcaC01g02294 Brassica carinata HOM05D006818 ORTHO05D008674 3.3e-120 435.6 306 68.3
C03p66930 Brassica napus HOM05D006818 ORTHO05D008674 3.3e-120 435.6 306 68.3
BolC3t18966H Brassica oleracea HOM05D006818 ORTHO05D008674 4.3e-120 435.3 306 68.3
FAN25G3657 Fragaria x ananassa HOM05D006818 ORTHO05D008674 2.4e-118 429.5 246 81.3
Zm00001eb070100 Zea mays HOM05D006818 ORTHO05D008674 3.1e-118 429.1 339 63.7
Os04g0626400 Oryza sativa ssp. japonica HOM05D006818 ORTHO05D008674 9.0e-118 427.6 343 64.7
Atru.BG.12.p Acer truncatum HOM05D006818 ORTHO05D008674 4.4e-117 425.2 232 86.6
Actinidia05109 Actinidia chinensis HOM05D006818 ORTHO05D008674 4.4e-117 425.2 328 67.7
AT3G47860 Arabidopsis thaliana HOM05D006818 ORTHO05D008674 2.9e-116 422.5 315 65.7
vmacro11742 Vaccinium macrocarpon HOM05D006818 ORTHO05D008674 2.1e-114 416.4 329 66.0
unitig_62.g23277 Utricularia gibba HOM05D006818 ORTHO05D008674 1.0e-113 414.1 327 63.3
Aa31LG4G16540 Aethionema arabicum HOM05D006818 ORTHO05D008674 1.3e-113 413.7 308 64.9
AUR62006731 Chenopodium quinoa HOM05D006818 ORTHO05D008674 3.2e-107 392.5 217 84.3
MD03G1208100 Malus domestica HOM05D006818 ORTHO05D008674 5.4e-107 391.7 308 63.0
HPP92_009349 Vanilla planifolia HOM05D006818 ORTHO05D008674 7.9e-106 387.9 232 78.0
Sp5g14080 Schrenkiella parvula HOM05D006818 ORTHO05D008674 8.1e-103 377.9 272 68.4
AUR62000376 Chenopodium quinoa HOM05D006818 ORTHO05D008674 5.1e-97 358.6 323 60.1
Mapoly0115s0028 Marchantia polymorpha HOM05D006818 ORTHO05D008674 9.6e-96 354.4 334 55.4
SMO147G0254 Selaginella moellendorffii HOM05D006818 ORTHO05D008674 2.5e-91 339.7 233 67.4
Hma1.2p1_1271F.1_g271840 Hydrangea macrophylla HOM05D006818 ORTHO05D008674 1.3e-89 334.0 182 86.3
Hma1.2p1_1609F.1_g293429 Hydrangea macrophylla HOM05D006818 ORTHO05D008674 1.3e-89 334.0 182 86.3
Pp3c9_6110 Physcomitrium patens HOM05D006818 ORTHO05D008674 9.0e-86 321.2 330 49.7
TPR.G12727 Trifolium pratense HOM05D006818 ORTHO05D008674 2.2e-84 316.6 243 65.8
TPR.G29121 Trifolium pratense HOM05D006818 ORTHO05D008674 2.0e-77 293.5 197 72.1
SEGI_29406 Sequoiadendron giganteum HOM05D006818 ORTHO05D008674 3.0e-73 279.6 216 59.7
AagrBONN_evm.TU.Sc2ySwM_228.3024 Anthoceros agrestis HOM05D006818 ORTHO05D008674 2.9e-68 263.1 189 63.5
TPR.G29124 Trifolium pratense HOM05D006818 ORTHO05D008674 8.0e-66 255.0 150 80.7
CBR_g57971 Chara braunii HOM05D006818 ORTHO05D008674 1.8e-57 227.3 203 56.7
PRCOL_00005879 Prasinoderma coloniale HOM05D006818 ORTHO05D008674 6.8e-41 172.2 183 46.4
RcHm_v2.0_Chr3g0496801 Rosa chinensis HOM05D006818 ORTHO05D008674 4.0e-33 146.4 141 56.7
Glyma.14G153300 Glycine max HOM05D006818 ORTHO05D008674 2.2e-31 140.6 78 80.8
Ah.06g195920 Amaranthus hybridus HOM05D001023 ORTHO05D000912 7.5e-24 115.5 131 49.6
Actinidia09914 Actinidia chinensis HOM05D006818 ORTHO05D008674 6.6e-20 102.4 59 79.7
SEGI_26249 Sequoiadendron giganteum HOM05D006818 ORTHO05D008674 5.1e-12 76.3 52 67.3
Sed0001393 Sechium edule HOM05D006818 ORTHO05D372820 1.1e-06 58.5 205 28.3
MD02G1010500 Malus domestica HOM05D003204 ORTHO05D003566 2.4e-06 57.4 167 28.1
Sp6g19740 Schrenkiella parvula HOM05D003204 ORTHO05D003566 2.4e-06 57.4 167 29.9
Atru.chr7.159 Acer truncatum HOM05D003204 ORTHO05D003566 3.2e-06 57.0 168 31.0
AUR62039740 Chenopodium quinoa HOM05D003204 ORTHO05D003566 4.2e-06 56.6 184 27.7
Solyc12g010320.2 Solanum lycopersicum HOM05D003204 ORTHO05D003566 4.2e-06 56.6 171 28.1
Sopen12g005200 Solanum pennellii HOM05D003204 ORTHO05D003566 4.2e-06 56.6 171 28.1
BcaB08g36152 Brassica carinata HOM05D003204 ORTHO05D003566 5.4e-06 56.2 170 28.2
Lalb_Chr07g0179701 Lupinus albus HOM05D003204 ORTHO05D003566 5.4e-06 56.2 167 29.3
Manes.06G038651 Manihot esculenta HOM05D003204 ORTHO05D003566 7.1e-06 55.8 167 27.5
Ah.09g226600 Amaranthus hybridus HOM05D003204 ORTHO05D003566 9.3e-06 55.5 167 28.7
CAN.G520.7 Capsicum annuum HOM05D003204 ORTHO05D003566 9.3e-06 55.5 167 29.3


User provided reference genes

Program Settings