Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR627G0070 Trochodendron aralioides HOM05D004354 ORTHO05D005409 4.2e-206 721.1 356 100.0
Dinv04814 Davidia involucrata HOM05D004354 ORTHO05D005409 3.9e-151 538.5 320 81.6
Manes.13G144800 Manihot esculenta HOM05D004354 ORTHO05D005409 5.1e-151 538.1 319 81.8
CSS0014582 Camellia sinensis var. sinensis HOM05D004354 ORTHO05D005409 2.5e-150 535.8 315 81.6
CSS0000262 Camellia sinensis var. sinensis HOM05D004354 ORTHO05D005409 4.3e-150 535.0 315 81.6
TAR626G1453 Trochodendron aralioides HOM05D004354 ORTHO05D005409 4.3e-150 535.0 322 83.2
Dinv13394 Davidia involucrata HOM05D004354 ORTHO05D005409 7.3e-150 534.3 333 78.1
Gohir.A03G155600 Gossypium hirsutum HOM05D004354 ORTHO05D005409 2.1e-149 532.7 339 75.8
Gohir.D02G178700 Gossypium hirsutum HOM05D004354 ORTHO05D005409 2.1e-149 532.7 339 75.8
Thecc.02G182400 Theobroma cacao HOM05D004354 ORTHO05D005409 6.2e-149 531.2 319 79.3
Actinidia11016 Actinidia chinensis HOM05D004354 ORTHO05D005409 8.1e-149 530.8 320 79.4
Gorai.005G200400 Gossypium raimondii HOM05D004354 ORTHO05D005409 1.4e-148 530.0 339 75.5
Rhsim06G0139400 Rhododendron simsii HOM05D004354 ORTHO05D005409 2.4e-148 529.3 338 76.6
CiPaw.03G179000 Carya illinoinensis HOM05D004354 ORTHO05D005409 1.2e-147 526.9 336 75.6
QL08p039658 Quercus lobata HOM05D004354 ORTHO05D005409 1.5e-147 526.6 333 77.5
GSVIVG01020571001 Vitis vinifera HOM05D004354 ORTHO05D005409 2.6e-147 525.8 319 78.4
Cfa014637 Carpinus fangiana HOM05D004354 ORTHO05D005409 3.4e-147 525.4 318 79.9
Cc05_g07440 Coffea canephora HOM05D004354 ORTHO05D005409 5.8e-147 524.6 321 77.9
COL.COLO4_05947 Corchorus olitorius HOM05D004354 ORTHO05D005409 1.3e-146 523.5 339 74.9
Hma1.2p1_0002F.1_g002080 Hydrangea macrophylla HOM05D004354 ORTHO05D005409 1.7e-146 523.1 326 77.6
Prupe.3G139300 Prunus persica HOM05D004354 ORTHO05D005409 4.9e-146 521.5 319 77.7
Ciclev10014745m.g Citrus clementina HOM05D004354 ORTHO05D005409 8.4e-146 520.8 321 79.4
Nn1g06483 Nelumbo nucifera HOM05D004354 ORTHO05D005409 2.1e-144 516.2 320 79.1
TWI23G0225 Tripterygium wilfordii HOM05D004354 ORTHO05D005409 5.1e-143 511.5 323 76.8
FAN05G5576 Fragaria x ananassa HOM05D004354 ORTHO05D005409 8.7e-143 510.8 296 81.8
FvH4_6g26490 Fragaria vesca HOM05D004354 ORTHO05D005409 9.6e-142 507.3 295 81.7
Potri.017G012600 Populus trichocarpa HOM05D004354 ORTHO05D005409 1.3e-141 506.9 319 77.1
FAN02G3736 Fragaria x ananassa HOM05D004354 ORTHO05D005409 3.6e-141 505.4 296 80.4
RcHm_v2.0_Chr2g0127681 Rosa chinensis HOM05D004354 ORTHO05D005409 3.6e-141 505.4 304 78.6
Sopen12g001470 Solanum pennellii HOM05D004354 ORTHO05D005409 3.1e-140 502.3 324 73.5
FAN14G3021 Fragaria x ananassa HOM05D004354 ORTHO05D005409 4.0e-140 501.9 306 79.1
PGR142G0821 Punica granatum HOM05D004354 ORTHO05D005409 5.3e-140 501.5 319 75.5
MELO3C013588.2 Cucumis melo HOM05D004354 ORTHO05D005409 6.9e-140 501.1 325 75.1
PSO675G5152 Papaver somniferum HOM05D004354 ORTHO05D005409 2.6e-139 499.2 312 75.0
THA.LOC104804057 Tarenaya hassleriana HOM05D004354 ORTHO05D005409 2.6e-139 499.2 315 74.6
Solyc12g005470.2 Solanum lycopersicum HOM05D004354 ORTHO05D005409 4.5e-139 498.4 324 73.1
Sc21g0003070 Simmondsia chinensis HOM05D004354 ORTHO05D005409 7.6e-139 497.7 322 72.4
CsaV3_6G015220 Cucumis sativus L. HOM05D004354 ORTHO05D005409 1.3e-138 496.9 325 74.2
Potri.007G139300 Populus trichocarpa HOM05D004354 ORTHO05D005409 1.7e-138 496.5 320 75.6
PSO541G1897 Papaver somniferum HOM05D004354 ORTHO05D005409 2.2e-138 496.1 312 74.7
Aqoxy1G02375 Aquilegia oxysepala HOM05D004354 ORTHO05D005409 2.9e-138 495.7 323 74.3
Solyc07g053850.3 Solanum lycopersicum HOM05D004354 ORTHO05D005409 2.9e-138 495.7 318 75.8
MSTRG.6802 Avicennia marina HOM05D004354 ORTHO05D005409 6.4e-138 494.6 309 75.7
CANSAT64G2319 Cannabis sativa HOM05D004354 ORTHO05D005409 8.4e-138 494.2 318 74.5
Sopen07g027820 Solanum pennellii HOM05D004354 ORTHO05D005409 8.4e-138 494.2 318 75.8
MD09G1244500 Malus domestica HOM05D004354 ORTHO05D005409 3.2e-137 492.3 309 76.4
MD17G1236500 Malus domestica HOM05D004354 ORTHO05D005409 9.3e-137 490.7 309 76.1
PGSC0003DMG400032816 Solanum tuberosum HOM05D004354 ORTHO05D005409 4.6e-136 488.4 319 75.5
Actinidia11091 Actinidia chinensis HOM05D004354 ORTHO05D005409 7.9e-136 487.6 285 82.5
FAN09G2589 Fragaria x ananassa HOM05D004354 ORTHO05D005409 7.9e-136 487.6 336 72.9
Sed0026522 Sechium edule HOM05D004354 ORTHO05D005409 7.9e-136 487.6 325 72.6
arahy.Tifrunner.gnm1.ann1.SG72Z3 Arachis hypogaea HOM05D004354 ORTHO05D005409 1.8e-135 486.5 319 70.8
Lsat_1_v5_gn_4_66820 Lactuca sativa HOM05D004354 ORTHO05D005409 2.3e-135 486.1 305 76.4
AUR62033734 Chenopodium quinoa HOM05D004354 ORTHO05D005409 1.9e-134 483.0 349 66.5
DCAR_009753 Daucus carota HOM05D004354 ORTHO05D005409 1.9e-134 483.0 319 73.4
Lj1A714G27 Lonicera japonica HOM05D004354 ORTHO05D005409 3.3e-134 482.3 317 73.8
vmacro12326 Vaccinium macrocarpon HOM05D004354 ORTHO05D005409 5.6e-134 481.5 279 81.7
Thhalv10002192m.g Eutrema salsugineum HOM05D004354 ORTHO05D005409 9.6e-134 480.7 305 74.1
Eucgr.K01043 Eucalyptus grandis HOM05D004354 ORTHO05D005409 1.3e-133 480.3 321 72.0
AL3G53730 Arabidopsis lyrata HOM05D004354 ORTHO05D005409 1.6e-133 479.9 305 73.4
VMungo1080G0203 Vigna mungo HOM05D004354 ORTHO05D005409 1.6e-133 479.9 329 69.9
arahy.Tifrunner.gnm1.ann1.5TEV2E Arachis hypogaea HOM05D004354 ORTHO05D005409 3.7e-133 478.8 335 67.8
Oeu036067.1 Olea europaea HOM05D004354 ORTHO05D005409 3.7e-133 478.8 313 71.6
TWI59G0686 Tripterygium wilfordii HOM05D004354 ORTHO05D005409 3.1e-132 475.7 323 72.4
arahy.Tifrunner.gnm1.ann1.6AZK3P Arachis hypogaea HOM05D004354 ORTHO05D005409 4.0e-132 475.3 317 72.6
arahy.Tifrunner.gnm1.ann1.7S1AZB Arachis hypogaea HOM05D004354 ORTHO05D005409 4.0e-132 475.3 317 72.6
Phvul.005G102100 Phaseolus vulgaris HOM05D004354 ORTHO05D005409 4.0e-132 475.3 324 70.1
MBI18_g19626_MAGBIO Magnolia biondii HOM05D004354 ORTHO05D005409 6.9e-132 474.6 322 73.9
Sp3g33900 Schrenkiella parvula HOM05D004354 ORTHO05D005409 1.2e-131 473.8 314 71.0
Lalb_Chr19g0135191 Lupinus albus HOM05D004354 ORTHO05D005409 1.5e-131 473.4 309 71.5
AT2G20650 Arabidopsis thaliana HOM05D004354 ORTHO05D005409 2.0e-131 473.0 305 72.8
Medtr4g078525 Medicago truncatula HOM05D004354 ORTHO05D005409 2.0e-131 473.0 320 69.7
Glyma.06G290800 Glycine max HOM05D004354 ORTHO05D005409 2.6e-131 472.6 322 69.3
Phvul.011G119730 Phaseolus vulgaris HOM05D004354 ORTHO05D005409 2.6e-131 472.6 322 69.6
Glyma.12G205300 Glycine max HOM05D004354 ORTHO05D005409 4.5e-131 471.9 319 69.6
Glyma.13G295600 Glycine max HOM05D004354 ORTHO05D005409 5.8e-131 471.5 319 70.2
Nitab4.5_0001184g0100 Nicotiana tabacum HOM05D004354 ORTHO05D005409 8.4e-130 467.6 318 71.4
Glyma.12G116100 Glycine max HOM05D004354 ORTHO05D005409 1.9e-129 466.5 322 68.6
HanXRQChr05g0143301 Helianthus annuus HOM05D004354 ORTHO05D005409 1.9e-129 466.5 303 74.6
Aa31LG8G17560 Aethionema arabicum HOM05D004354 ORTHO05D005409 3.2e-129 465.7 316 69.3
Lj3g0011593 Lotus japonicus HOM05D004354 ORTHO05D005409 3.2e-129 465.7 303 73.3
Carub.0003s3517 Capsella rubella HOM05D004354 ORTHO05D005409 1.2e-128 463.8 306 71.9
Ca_18937_v3 Cicer arietinum L. HOM05D004354 ORTHO05D005409 1.6e-128 463.4 320 68.4
Migut.M00279 Erythranthe guttata HOM05D004354 ORTHO05D005409 2.1e-128 463.0 309 68.0
SGA_v2.0_scaffold70G23519 Striga asiatica HOM05D004354 ORTHO05D005409 3.5e-128 462.2 328 66.2
Ca_09445_v3 Cicer arietinum L. HOM05D004354 ORTHO05D005409 6.0e-128 461.5 319 68.0
BcaB03g16858 Brassica carinata HOM05D004354 ORTHO05D005409 3.9e-127 458.8 308 70.5
Psat7g168720 Pisum sativum HOM05D004354 ORTHO05D005409 8.7e-127 457.6 311 70.1
THA.LOC104824696 Tarenaya hassleriana HOM05D004354 ORTHO05D005409 1.1e-126 457.2 316 69.9
Lj3g0017215 Lotus japonicus HOM05D004354 ORTHO05D005409 1.9e-126 456.4 303 71.6
AT4G28370 Arabidopsis thaliana HOM05D004354 ORTHO05D005409 2.5e-126 456.1 310 69.7
BraA07t27805Z Brassica rapa HOM05D004354 ORTHO05D005409 4.3e-126 455.3 296 73.3
Hund01030 Selenicereus undatus HOM05D004354 ORTHO05D005409 4.3e-126 455.3 316 68.7
EL10Ac9g20792 Beta vulgaris HOM05D004354 ORTHO05D005409 5.7e-126 454.9 277 77.3
CARHR236110 Cardamine hirsuta HOM05D004354 ORTHO05D005409 1.3e-125 453.8 319 67.7
BcaC06g36756 Brassica carinata HOM05D004354 ORTHO05D005409 3.7e-125 452.2 296 72.6
C07p00280 Brassica napus HOM05D004354 ORTHO05D005409 3.7e-125 452.2 296 73.0
BolC7t40478H Brassica oleracea HOM05D004354 ORTHO05D005409 3.7e-125 452.2 296 72.6
Carub.0007s1237 Capsella rubella HOM05D004354 ORTHO05D005409 4.8e-125 451.8 310 68.7
AL7G24220 Arabidopsis lyrata HOM05D004354 ORTHO05D005409 1.8e-124 449.9 315 67.9
Thhalv10024798m.g Eutrema salsugineum HOM05D004354 ORTHO05D005409 1.8e-124 449.9 315 67.6
Lalb_Chr03g0029541 Lupinus albus HOM05D004354 ORTHO05D005409 2.4e-124 449.5 327 65.7
ECA234G2175 Erigeron canadensis HOM05D004354 ORTHO05D005409 3.1e-124 449.1 296 72.6
Peaxi162Scf01415g00030 Petunia axillaris HOM05D004354 ORTHO05D005409 3.1e-124 449.1 345 65.2
TPR.G2846 Trifolium pratense HOM05D004354 ORTHO05D005409 5.3e-124 448.4 334 65.0
BraA08t33968Z Brassica rapa HOM05D004354 ORTHO05D005409 1.5e-123 446.8 310 69.4
PGSC0003DMG400013734 Solanum tuberosum HOM05D004354 ORTHO05D005409 1.5e-123 446.8 341 65.1
ClCG02G017760 Citrullus lanatus HOM05D004354 ORTHO05D005409 1.3e-122 443.7 335 66.9
A08p20090 Brassica napus HOM05D004354 ORTHO05D005409 1.7e-122 443.4 310 69.0
BcaC07g38328 Brassica carinata HOM05D004354 ORTHO05D005409 1.1e-121 440.7 310 68.7
C08p10830 Brassica napus HOM05D004354 ORTHO05D005409 1.1e-121 440.7 310 68.7
BolC8t48758H Brassica oleracea HOM05D004354 ORTHO05D005409 1.1e-121 440.7 310 68.7
Cpa.g.sc83.63 Carica papaya HOM05D004354 ORTHO05D005409 1.9e-121 439.9 347 65.1
Aa31LG2G22230 Aethionema arabicum HOM05D004354 ORTHO05D005409 2.5e-121 439.5 331 65.9
Lalb_Chr01g0005151 Lupinus albus HOM05D004354 ORTHO05D005409 5.5e-121 438.3 309 67.3
BcaB03g12570 Brassica carinata HOM05D004354 ORTHO05D005409 7.2e-121 438.0 310 67.1
Nitab4.5_0000638g0120 Nicotiana tabacum HOM05D004354 ORTHO05D005409 7.2e-121 438.0 309 70.2
Nitab4.5_0001752g0070 Nicotiana tabacum HOM05D004354 ORTHO05D005409 3.0e-119 432.6 309 69.6
HPP92_012418 Vanilla planifolia HOM05D004354 ORTHO05D005409 3.9e-119 432.2 303 70.3
Peaxi162Scf00008g00611 Petunia axillaris HOM05D004354 ORTHO05D005409 1.5e-118 430.3 324 65.4
CARHR111300 Cardamine hirsuta HOM05D004354 ORTHO05D005409 3.7e-117 425.6 277 73.3
Haze_13201 Corylus avellana HOM05D004354 ORTHO05D005409 4.8e-117 425.2 343 64.4
A07p00120 Brassica napus HOM05D004354 ORTHO05D005409 1.1e-116 424.1 299 69.2
ATR0763G074 Amborella trichopoda HOM05D004354 ORTHO05D005409 4.6e-112 408.7 278 71.2
Sed0007610 Sechium edule HOM05D004354 ORTHO05D005409 2.8e-109 399.4 256 76.2
Sp7g26330 Schrenkiella parvula HOM05D004354 ORTHO05D005409 5.1e-103 378.6 321 59.5
Os07g0501900 Oryza sativa ssp. japonica HOM05D004354 ORTHO05D005409 2.7e-96 356.3 288 64.2
Nitab4.5_0006194g0010 Nicotiana tabacum HOM05D004354 ORTHO05D005409 1.0e-95 354.4 318 57.5
unitig_22.g5828 Utricularia gibba HOM05D004354 ORTHO05D005409 1.8e-92 343.6 320 53.4
SGA_v2.0_scaffold34G13945 Striga asiatica HOM05D004354 ORTHO05D005409 5.3e-92 342.0 294 57.8
Pp3c18_8870 Physcomitrium patens HOM05D004354 ORTHO05D005409 5.7e-86 322.0 332 52.7
Pp3c21_16510 Physcomitrium patens HOM05D004354 ORTHO05D005409 1.7e-82 310.5 322 52.5
AUR62038895 Chenopodium quinoa HOM05D004354 ORTHO05D005409 8.5e-82 308.1 218 69.7
Mapoly0093s0076 Marchantia polymorpha HOM05D004354 ORTHO05D005409 1.9e-81 307.0 336 50.3
SMO351G0175 Selaginella moellendorffii HOM05D004354 ORTHO05D005409 6.8e-79 298.5 335 49.0
CDE05G0163 Ceratophyllum demersum HOM05D004354 ORTHO05D005409 3.1e-76 289.7 203 70.9
Zm00001eb322160 Zea mays HOM05D004354 ORTHO05D005409 2.1e-72 276.9 177 80.8
Atru.chr6.2897 Acer truncatum HOM05D004354 ORTHO05D005409 3.2e-52 209.9 125 84.0
Atru.chr6.2898 Acer truncatum HOM05D004354 ORTHO05D005409 1.1e-49 201.4 132 69.7
CDE05G2312 Ceratophyllum demersum HOM05D004354 ORTHO05D005409 3.2e-36 156.8 128 58.6
AUR62038894 Chenopodium quinoa HOM05D004354 ORTHO05D005409 5.4e-36 156.0 105 63.8
CBR_g36920 Chara braunii HOM05D004354 ORTHO05D005409 1.0e-34 151.8 324 35.8
SEGI_31944 Sequoiadendron giganteum HOM05D004354 ORTHO05D005409 2.1e-32 144.1 106 62.3
LjContig00564g0000671 Lotus japonicus HOM05D000084 ORTHO05D000363 4.9e-29 132.9 92 66.3
arahy.Tifrunner.gnm1.ann1.56HDLZ Arachis hypogaea HOM05D004354 ORTHO05D005409 1.9e-28 131.0 100 60.0
TPR.G10974 Trifolium pratense HOM05D004354 ORTHO05D005409 6.7e-26 122.5 150 44.7
SGA_v2.0_scaffold70G23386 Striga asiatica HOM05D004354 ORTHO05D005409 2.4e-20 104.0 106 52.8
Nn1g04142 Nelumbo nucifera HOM05D004354 ORTHO05D005409 1.8e-18 97.8 56 83.9
PRCOL_00005121 Prasinoderma coloniale HOM05D000722 ORTHO05D000590 4.3e-17 93.2 302 26.8
Glyma.14G107350 Glycine max HOM05D004354 ORTHO05D005409 1.9e-12 77.8 72 48.6
Ciclev10013591m.g Citrus clementina HOM05D004354 ORTHO05D005409 7.9e-11 72.4 43 79.1
CDE05G0895 Ceratophyllum demersum HOM05D004354 ORTHO05D005409 1.0e-10 72.0 39 89.7
Cre08.g381900 Chlamydomonas reinhardtii HOM05D004354 ORTHO05D005409 1.8e-10 71.2 117 37.6


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