Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR626G1462 Trochodendron aralioides HOM05D005328 ORTHO05D006049 8.8e-193 677.2 449 100.0
Dinv04372 Davidia involucrata HOM05D005328 ORTHO05D006049 4.1e-113 412.5 449 58.8
Rhsim13G0137800 Rhododendron simsii HOM05D005328 ORTHO05D006049 5.1e-108 395.6 450 56.2
Manes.03G095600 Manihot esculenta HOM05D005328 ORTHO05D006049 3.1e-105 386.3 455 53.6
Actinidia02271 Actinidia chinensis HOM05D005328 ORTHO05D006049 9.1e-105 384.8 456 56.6
CSS0022453 Camellia sinensis var. sinensis HOM05D005328 ORTHO05D006049 2.2e-103 380.2 451 56.8
Hma1.2p1_0391F.1_g142830 Hydrangea macrophylla HOM05D005328 ORTHO05D006049 5.7e-99 365.5 462 53.2
Hund04726 Selenicereus undatus HOM05D005328 ORTHO05D006049 7.0e-97 358.6 453 57.6
Sc13g0008540 Simmondsia chinensis HOM05D005328 ORTHO05D006049 6.5e-95 352.1 451 57.0
Lj6g0010372 Lotus japonicus HOM05D005328 ORTHO05D006049 8.5e-95 351.7 457 53.6
PGR042G0801 Punica granatum HOM05D005328 ORTHO05D006049 4.2e-94 349.4 452 57.7
Thecc.04G160200 Theobroma cacao HOM05D005328 ORTHO05D006049 4.2e-94 349.4 463 52.7
Eucgr.E04239 Eucalyptus grandis HOM05D005328 ORTHO05D006049 5.5e-94 349.0 450 52.4
Potri.006G000200 Populus trichocarpa HOM05D005328 ORTHO05D006049 7.2e-94 348.6 475 62.9
CiPaw.10G085200 Carya illinoinensis HOM05D005328 ORTHO05D006049 9.4e-94 348.2 451 63.6
CAN.G2049.4 Capsicum annuum HOM05D005328 ORTHO05D006049 1.8e-92 344.0 453 56.1
Phvul.006G134100 Phaseolus vulgaris HOM05D005328 ORTHO05D006049 3.0e-92 343.2 477 50.3
Sed0006700 Sechium edule HOM05D005328 ORTHO05D006049 3.0e-92 343.2 512 59.8
Cpa.g.sc53.124 Carica papaya HOM05D005328 ORTHO05D006049 3.9e-92 342.8 487 50.3
Oeu016925.1 Olea europaea HOM05D005328 ORTHO05D006049 5.2e-92 342.4 486 56.2
Gorai.005G008200 Gossypium raimondii HOM05D005328 ORTHO05D006049 6.7e-92 342.0 462 60.0
Gohir.A02G007200 Gossypium hirsutum HOM05D005328 ORTHO05D006049 1.5e-91 340.9 462 57.6
Ca_00786_v3 Cicer arietinum L. HOM05D005328 ORTHO05D006049 2.0e-91 340.5 452 61.3
Ca_11373_v3 Cicer arietinum L. HOM05D005328 ORTHO05D006049 2.0e-91 340.5 452 61.3
Lsat_1_v5_gn_4_65161 Lactuca sativa HOM05D005328 ORTHO05D006049 2.0e-91 340.5 454 51.3
Glyma.15G123900 Glycine max HOM05D005328 ORTHO05D006049 9.7e-91 338.2 498 53.0
Aqoxy6G01137 Aquilegia oxysepala HOM05D005328 ORTHO05D006049 1.3e-90 337.8 552 55.8
SGA_v2.0_scaffold7G03648 Striga asiatica HOM05D005328 ORTHO05D006049 1.7e-90 337.4 449 54.8
vmacro03583 Vaccinium macrocarpon HOM05D005328 ORTHO05D006049 1.7e-90 337.4 471 49.0
Duzib151G0457 Durio zibethinus HOM05D005328 ORTHO05D006049 2.8e-90 336.7 459 56.2
COL.COLO4_12851 Corchorus olitorius HOM05D005328 ORTHO05D006049 8.2e-90 335.1 470 54.3
Gohir.D02G007001 Gossypium hirsutum HOM05D005328 ORTHO05D006049 1.4e-89 334.3 462 56.7
Nitab4.5_0005721g0030 Nicotiana tabacum HOM05D005328 ORTHO05D006049 7.0e-89 332.0 462 53.7
VMungo0540G0318 Vigna mungo HOM05D005328 ORTHO05D006049 9.1e-89 331.6 493 46.2
Atru.chr1.2204 Acer truncatum HOM05D005328 ORTHO05D006049 1.6e-88 330.9 515 46.2
TWI63G1825 Tripterygium wilfordii HOM05D005328 ORTHO05D006049 3.5e-88 329.7 475 51.4
QL05p066147 Quercus lobata HOM05D005328 ORTHO05D006049 5.9e-88 328.9 453 57.0
Migut.M01485 Erythranthe guttata HOM05D005328 ORTHO05D006049 1.0e-87 328.2 449 55.9
Sopen02g029040 Solanum pennellii HOM05D005328 ORTHO05D006049 1.0e-87 328.2 484 49.8
unitig_748.g7855 Utricularia gibba HOM05D005328 ORTHO05D006049 1.0e-87 328.2 464 50.0
TPR.G10498 Trifolium pratense HOM05D005328 ORTHO05D006049 1.7e-87 327.4 460 57.6
ECA234G3238 Erigeron canadensis HOM05D005328 ORTHO05D006049 5.0e-87 325.9 452 49.1
AUR62021212 Chenopodium quinoa HOM05D005328 ORTHO05D006049 1.1e-86 324.7 455 59.8
GSVIVG01018754001 Vitis vinifera HOM05D005328 ORTHO05D006049 1.1e-86 324.7 574 54.5
HanXRQChr17g0558521 Helianthus annuus HOM05D005328 ORTHO05D006049 1.5e-86 324.3 465 49.9
CDE03G0050 Ceratophyllum demersum HOM05D005328 ORTHO05D006049 7.2e-86 322.0 449 53.7
Medtr2g028200 Medicago truncatula HOM05D005328 ORTHO05D006049 3.6e-85 319.7 510 59.0
Cc09_g00040 Coffea canephora HOM05D005328 ORTHO05D006049 8.0e-85 318.5 569 50.8
Ciclev10015350m.g Citrus clementina HOM05D005328 ORTHO05D006049 4.0e-84 316.2 460 50.0
HPP92_007484 Vanilla planifolia HOM05D005328 ORTHO05D006049 2.6e-83 313.5 452 49.3
Lalb_Chr15g0088491 Lupinus albus HOM05D005328 ORTHO05D006049 4.4e-83 312.8 513 46.0
Sabra06G0000700 Salix brachista HOM05D005328 ORTHO05D006049 7.5e-83 312.0 475 56.6
Solyc02g084340.3 Solanum lycopersicum HOM05D005328 ORTHO05D006049 7.5e-83 312.0 458 48.7
THA.LOC104804861 Tarenaya hassleriana HOM05D005328 ORTHO05D006049 7.5e-83 312.0 488 55.7
THA.LOC104807080 Tarenaya hassleriana HOM05D005328 ORTHO05D006049 7.5e-83 312.0 488 55.7
Ah.07g207330 Amaranthus hybridus HOM05D005328 ORTHO05D002024 1.3e-82 311.2 566 47.3
arahy.Tifrunner.gnm1.ann1.B05UD4 Arachis hypogaea HOM05D005328 ORTHO05D006049 3.7e-82 309.7 471 57.3
MD04G1014200 Malus domestica HOM05D005328 ORTHO05D006049 5.3e-81 305.8 528 52.3
MELO3C017635.2 Cucumis melo HOM05D005328 ORTHO05D006049 2.7e-80 303.5 450 53.8
Nitab4.5_0002880g0010 Nicotiana tabacum HOM05D005328 ORTHO05D006049 4.5e-80 302.8 453 55.4
Aa31LG1G25860 Aethionema arabicum HOM05D005328 ORTHO05D006049 2.2e-79 300.4 451 45.9
A03p24730 Brassica napus HOM05D005328 ORTHO05D006049 5.0e-79 299.3 478 52.3
BraA03t11679Z Brassica rapa HOM05D005328 ORTHO05D006049 5.0e-79 299.3 478 52.5
Peaxi162Scf00083g00091 Petunia axillaris HOM05D005328 ORTHO05D006049 5.0e-79 299.3 454 59.3
BcaB02g08879 Brassica carinata HOM05D005328 ORTHO05D006049 1.1e-78 298.1 460 54.3
EL10Ac3g05669 Beta vulgaris HOM05D005328 ORTHO05D006049 1.5e-78 297.7 510 49.6
Psat1g170800 Pisum sativum HOM05D005328 ORTHO05D006049 1.6e-77 294.3 494 54.7
C03p29470 Brassica napus HOM05D005328 ORTHO05D006049 2.1e-77 293.9 454 54.0
BcaC01g05181 Brassica carinata HOM05D005328 ORTHO05D006049 4.7e-77 292.7 454 53.7
BcaC02g12330 Brassica carinata HOM05D005328 ORTHO05D006049 4.7e-77 292.7 451 51.7
CsaV3_4G004310 Cucumis sativus L. HOM05D005328 ORTHO05D006049 4.7e-77 292.7 449 52.3
BraA05t19414Z Brassica rapa HOM05D005328 ORTHO05D006049 1.4e-76 291.2 459 53.6
arahy.Tifrunner.gnm1.ann1.QMQM64 Arachis hypogaea HOM05D005328 ORTHO05D006049 2.3e-76 290.4 532 49.4
C04p05070 Brassica napus HOM05D005328 ORTHO05D006049 4.0e-76 289.7 458 53.1
ClCG07G017100 Citrullus lanatus HOM05D005328 ORTHO05D006049 5.2e-76 289.3 449 50.1
A05p04290 Brassica napus HOM05D005328 ORTHO05D006049 6.8e-76 288.9 455 55.4
FAN17G2578 Fragaria x ananassa HOM05D005328 ORTHO05D006049 9.8e-75 285.0 582 49.8
RcHm_v2.0_Chr4g0414011 Rosa chinensis HOM05D005328 ORTHO05D006049 9.8e-75 285.0 531 55.4
AL4G43160 Arabidopsis lyrata HOM05D005328 ORTHO05D006049 2.2e-74 283.9 478 57.7
Sp4g26280 Schrenkiella parvula HOM05D005328 ORTHO05D006049 2.2e-74 283.9 483 55.9
PSO017G7149 Papaver somniferum HOM05D005328 ORTHO05D006049 3.7e-74 283.1 515 52.0
Prupe.1G161200 Prunus persica HOM05D005328 ORTHO05D006049 3.1e-73 280.0 593 43.8
SalBow8G1780 Salvia bowleyana HOM05D005328 ORTHO05D006049 4.1e-73 279.6 526 51.0
Thhalv10001457m.g Eutrema salsugineum HOM05D005328 ORTHO05D006049 7.7e-72 275.4 455 46.2
AT2G44200 Arabidopsis thaliana HOM05D005328 ORTHO05D006049 5.0e-71 272.7 497 55.9
FAN07G1972 Fragaria x ananassa HOM05D005328 ORTHO05D006049 5.0e-71 272.7 603 45.1
FAN22G2230 Fragaria x ananassa HOM05D005328 ORTHO05D006049 1.5e-70 271.2 624 47.0
BcaB01g03324 Brassica carinata HOM05D005328 ORTHO05D006049 7.2e-70 268.9 449 51.9
PSO170G6444 Papaver somniferum HOM05D005328 ORTHO05D006049 1.6e-69 267.7 546 48.4
Glyma.09G018000 Glycine max HOM05D005328 ORTHO05D006049 2.1e-69 267.3 552 45.7
CARHR139360 Cardamine hirsuta HOM05D005328 ORTHO05D006049 3.0e-68 263.5 510 52.5
FvH4_4g13451 Fragaria vesca HOM05D005328 ORTHO05D006049 5.2e-68 262.7 622 42.8
FAN12G3626 Fragaria x ananassa HOM05D005328 ORTHO05D006049 5.2e-68 262.7 622 42.8
DCAR_022839 Daucus carota HOM05D005328 ORTHO05D006049 3.4e-67 260.0 169 81.1
Nn1g08402 Nelumbo nucifera HOM05D005328 ORTHO05D006049 4.9e-66 256.1 450 53.8
PGSC0003DMG400003630 Solanum tuberosum HOM05D005328 ORTHO05D006049 1.1e-65 255.0 625 47.8
BolC3t15295H Brassica oleracea HOM05D005328 ORTHO05D006049 3.2e-65 253.4 484 48.3
SEGI_06923 Sequoiadendron giganteum HOM05D005328 ORTHO05D006049 1.2e-64 251.5 624 41.0
Os08g0500200 Oryza sativa ssp. japonica HOM05D005328 ORTHO05D006049 3.5e-64 250.0 518 48.5
THA.LOC104798630 Tarenaya hassleriana HOM05D005328 ORTHO05D006049 1.8e-60 237.7 213 64.3
Carub.0004s2678 Capsella rubella HOM05D005328 ORTHO05D006049 6.4e-58 229.2 535 49.0
AagrBONN_evm.TU.Sc2ySwM_228.5016 Anthoceros agrestis HOM05D005328 ORTHO05D006049 2.1e-53 214.2 208 60.1
Pp3c3_9980 Physcomitrium patens HOM05D005328 ORTHO05D006049 2.1e-53 214.2 171 67.8
SMO143G0138 Selaginella moellendorffii HOM05D005328 ORTHO05D006049 6.8e-52 209.1 461 37.7
Prupe.1G162300 Prunus persica HOM05D005328 ORTHO05D006049 1.2e-45 188.3 178 64.0
Zm00001eb034090 Zea mays HOM05D005328 ORTHO05D006049 2.1e-45 187.6 519 46.1
AUR62016004 Chenopodium quinoa HOM05D005328 ORTHO05D006049 5.2e-44 183.0 354 52.8
Mapoly0104s0032 Marchantia polymorpha HOM05D005328 ORTHO05D006049 1.5e-38 164.9 177 51.4
SMO114G0026 Selaginella moellendorffii HOM05D005328 ORTHO05D006049 7.3e-38 162.5 424 34.4
ATR0751G077 Amborella trichopoda HOM05D005328 ORTHO05D006049 1.2e-37 161.8 114 83.3
CDE06G1717 Ceratophyllum demersum HOM05D005328 ORTHO05D006049 8.1e-37 159.1 94 89.4
CBR_g2953 Chara braunii HOM05D005328 ORTHO05D006049 8.9e-36 155.6 178 55.1
Carub.0004s2677 Capsella rubella HOM05D005328 ORTHO05D006049 2.6e-35 154.1 161 59.0
ATR0751G111 Amborella trichopoda HOM05D005328 ORTHO05D006049 1.4e-33 148.3 352 43.8
QL05p065813 Quercus lobata HOM05D005328 ORTHO05D006049 1.9e-33 147.9 82 93.9
AUR62016005 Chenopodium quinoa HOM05D005328 ORTHO05D006049 5.4e-33 146.4 94 80.9
Prupe.1G161500 Prunus persica HOM05D005328 ORTHO05D006049 1.3e-31 141.7 106 71.7
AT2G44195 Arabidopsis thaliana HOM05D005328 ORTHO05D006049 1.1e-30 138.7 149 55.0
DCAR_022842 Daucus carota HOM05D005328 ORTHO05D006049 1.1e-28 132.1 203 47.3
Zm00001eb097520 Zea mays HOM05D005328 ORTHO05D006049 7.6e-27 125.9 104 67.3
CDE06G0152 Ceratophyllum demersum HOM05D005328 ORTHO05D006049 3.5e-24 117.1 106 61.3
Cre01.g021400 Chlamydomonas reinhardtii HOM05D005328 ORTHO05D006049 2.5e-22 110.9 177 39.0
SMO117G0350 Selaginella moellendorffii HOM05D005328 ORTHO05D006049 3.6e-21 107.1 419 33.2
Haze_07067 Corylus avellana HOM05D005328 ORTHO05D006049 1.1e-20 105.5 155 48.4
TAR371G0561 Trochodendron aralioides HOM05D005328 ORTHO05D006049 3.1e-20 104.0 65 84.6
AL4G43150 Arabidopsis lyrata HOM05D005328 ORTHO05D006049 6.9e-20 102.8 154 46.1
SMO246G0007 Selaginella moellendorffii HOM05D005328 ORTHO05D006049 3.8e-18 97.1 63 79.4
PRCOL_00001794 Prasinoderma coloniale HOM05D005328 ORTHO05D006049 1.2e-16 92.0 186 34.9
VMungo1383G0559 Vigna mungo HOM05D005328 ORTHO05D006049 2.7e-16 90.9 52 86.5
SMO117G0022 Selaginella moellendorffii HOM05D005328 ORTHO05D006049 4.6e-16 90.1 96 49.0
Actinidia26768 Actinidia chinensis HOM05D005328 ORTHO05D006049 2.1e-13 81.3 59 76.3
SMO117G0182 Selaginella moellendorffii HOM05D005328 ORTHO05D006049 3.7e-13 80.5 110 44.5
Sabra16G0007800 Salix brachista HOM05D000040 ORTHO05D001305 1.8e-12 78.2 131 40.5
SMO117G0245 Selaginella moellendorffii HOM05D005328 ORTHO05D006049 3.1e-12 77.4 104 42.3
Cfa024420 Carpinus fangiana HOM05D005328 ORTHO05D006049 1.4e-09 68.6 177 28.2
BcaB02g08878 Brassica carinata HOM05D005328 ORTHO05D006049 2.1e-08 64.7 126 37.3
MCO07G343 Micromonas commoda HOM05D005328 ORTHO05D006049 2.1e-08 64.7 453 33.6
Potri.016G000501 Populus trichocarpa HOM05D005328 ORTHO05D006049 4.3e-06 57.0 62 62.9


User provided reference genes

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