Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR626G0253 Trochodendron aralioides HOM05D006143 ORTHO05D007587 3.7e-255 884.4 451 100.0
GSVIVG01021150001 Vitis vinifera HOM05D006143 ORTHO05D007587 6.5e-127 458.4 336 68.5
Nn1g04309 Nelumbo nucifera HOM05D006143 ORTHO05D007587 1.7e-119 433.7 336 68.5
Dinv17374 Davidia involucrata HOM05D006143 ORTHO05D007587 1.2e-117 427.6 339 65.8
CiPaw.10G054900 Carya illinoinensis HOM05D006143 ORTHO05D007587 5.3e-113 412.1 336 63.7
Hma1.2p1_0155F.1_g068560 Hydrangea macrophylla HOM05D006143 ORTHO05D007587 5.7e-107 392.1 358 59.2
CSS0012799 Camellia sinensis var. sinensis HOM05D006143 ORTHO05D007587 1.3e-106 391.0 338 60.7
MBI07_g06435_MAGBIO Magnolia biondii HOM05D006143 ORTHO05D007587 3.7e-106 389.4 336 60.1
MD05G1306600 Malus domestica HOM05D006143 ORTHO05D007587 1.4e-105 387.5 336 59.5
Atru.chr10.1746 Acer truncatum HOM05D006143 ORTHO05D007587 1.6e-104 384.0 336 59.5
Haze_06321 Corylus avellana HOM05D006143 ORTHO05D007587 2.0e-104 383.6 371 56.9
RcHm_v2.0_Chr5g0009801 Rosa chinensis HOM05D006143 ORTHO05D007587 1.5e-102 377.5 336 59.8
Prupe.4G055900 Prunus persica HOM05D006143 ORTHO05D007587 3.2e-102 376.3 336 59.2
Manes.16G034450 Manihot esculenta HOM05D006143 ORTHO05D007587 2.1e-101 373.6 336 59.2
Thecc.06G177300 Theobroma cacao HOM05D006143 ORTHO05D007587 4.7e-101 372.5 330 59.1
Duzib235G0124 Durio zibethinus HOM05D006143 ORTHO05D007587 1.2e-99 367.9 371 55.0
Potri.011G062100 Populus trichocarpa HOM05D006143 ORTHO05D007587 1.3e-98 364.4 334 58.1
ClCG03G007960 Citrullus lanatus HOM05D006143 ORTHO05D007587 3.7e-98 362.8 386 52.1
FvH4_7g02070 Fragaria vesca HOM05D006143 ORTHO05D007587 6.3e-98 362.1 353 56.1
PSO832G2207 Papaver somniferum HOM05D006143 ORTHO05D007587 5.3e-97 359.0 337 57.9
FAN06G1438 Fragaria x ananassa HOM05D006143 ORTHO05D007587 7.0e-97 358.6 361 55.4
Aqoxy4G00545 Aquilegia oxysepala HOM05D006143 ORTHO05D007587 2.0e-96 357.1 336 56.2
CsaV3_1G012630 Cucumis sativus L. HOM05D006143 ORTHO05D007587 3.5e-96 356.3 341 54.8
Sabra11G0044000 Salix brachista HOM05D006143 ORTHO05D007587 3.5e-96 356.3 334 56.0
Cfa000554 Carpinus fangiana HOM05D006143 ORTHO05D007587 7.7e-96 355.1 309 62.1
FvH4_3g08270 Fragaria vesca HOM05D006143 ORTHO05D007587 1.1e-94 351.3 343 55.7
FAN11G1643 Fragaria x ananassa HOM05D006143 ORTHO05D007587 1.1e-94 351.3 336 56.8
FAN03G1069 Fragaria x ananassa HOM05D006143 ORTHO05D007587 1.5e-94 350.9 362 54.7
MELO3C002630.2 Cucumis melo HOM05D006143 ORTHO05D007587 1.9e-94 350.5 382 50.5
Sc05g0007290 Simmondsia chinensis HOM05D006143 ORTHO05D007587 9.4e-94 348.2 362 53.6
TWI63G1355 Tripterygium wilfordii HOM05D006143 ORTHO05D007587 1.2e-93 347.8 337 55.5
PSO210G3197 Papaver somniferum HOM05D006143 ORTHO05D007587 1.6e-93 347.4 354 54.0
FAN16G0487 Fragaria x ananassa HOM05D006143 ORTHO05D007587 2.3e-92 343.6 345 55.4
FAN21G2423 Fragaria x ananassa HOM05D006143 ORTHO05D007587 2.2e-90 337.0 336 55.1
COL.COLO4_31385 Corchorus olitorius HOM05D006143 ORTHO05D007587 1.4e-89 334.3 330 53.9
Cpa.g.sc7.33 Carica papaya HOM05D006143 ORTHO05D007587 3.1e-89 333.2 339 53.7
Migut.M01078 Erythranthe guttata HOM05D006143 ORTHO05D007587 1.2e-88 331.3 345 52.2
Gorai.011G031600 Gossypium raimondii HOM05D006143 ORTHO05D007587 2.0e-88 330.5 338 52.1
Phvul.003G056900 Phaseolus vulgaris HOM05D006143 ORTHO05D007587 2.0e-88 330.5 338 52.4
PGR042G3042 Punica granatum HOM05D006143 ORTHO05D007587 2.0e-88 330.5 329 55.0
Eucgr.E03166 Eucalyptus grandis HOM05D006143 ORTHO05D007587 3.5e-88 329.7 359 50.7
Ciclev10015477m.g Citrus clementina HOM05D006143 ORTHO05D007587 4.5e-88 329.3 297 56.2
TPR.G16154 Trifolium pratense HOM05D006143 ORTHO05D007587 1.3e-87 327.8 336 50.3
Gohir.D10G029700 Gossypium hirsutum HOM05D006143 ORTHO05D007587 1.7e-87 327.4 338 51.8
DCAR_007976 Daucus carota HOM05D006143 ORTHO05D007587 2.9e-87 326.6 337 52.5
ATR0602G028 Amborella trichopoda HOM05D006143 ORTHO05D007587 5.0e-87 325.9 333 50.5
ECA234G2393 Erigeron canadensis HOM05D006143 ORTHO05D007587 1.5e-86 324.3 335 52.2
Glyma.07G203300 Glycine max HOM05D006143 ORTHO05D007587 4.2e-86 322.8 336 50.9
Lalb_Chr16g0384181 Lupinus albus HOM05D006143 ORTHO05D007587 7.2e-86 322.0 330 50.9
Psat7g118360 Pisum sativum HOM05D006143 ORTHO05D007587 9.5e-86 321.6 361 48.8
arahy.Tifrunner.gnm1.ann1.W3DLTW Arachis hypogaea HOM05D006143 ORTHO05D007587 1.2e-85 321.2 383 46.5
Gohir.A10G029200 Gossypium hirsutum HOM05D006143 ORTHO05D007587 2.8e-85 320.1 326 52.5
EL10Ac8g20474 Beta vulgaris HOM05D006143 ORTHO05D007587 1.0e-84 318.2 383 44.4
Oeu045072.2 Olea europaea HOM05D006143 ORTHO05D007587 1.4e-84 317.8 355 49.0
PGSC0003DMG400010721 Solanum tuberosum HOM05D006143 ORTHO05D007587 3.0e-84 316.6 341 51.9
Lsat_1_v5_gn_4_50941 Lactuca sativa HOM05D006143 ORTHO05D007587 4.0e-84 316.2 353 51.8
Hund23878 Selenicereus undatus HOM05D006143 ORTHO05D007587 6.8e-84 315.5 337 49.6
Medtr4g087975 Medicago truncatula HOM05D006143 ORTHO05D007587 1.5e-83 314.3 343 51.3
arahy.Tifrunner.gnm1.ann1.VAEI8B Arachis hypogaea HOM05D006143 ORTHO05D007587 2.0e-83 313.9 389 45.5
Actinidia39490 Actinidia chinensis HOM05D006143 ORTHO05D007587 1.7e-82 310.8 341 50.7
Lj4g0027541 Lotus japonicus HOM05D006143 ORTHO05D007587 2.8e-82 310.1 339 50.1
Glyma.13G172400 Glycine max HOM05D006143 ORTHO05D007587 3.7e-82 309.7 336 48.8
Sed0020086 Sechium edule HOM05D006143 ORTHO05D007587 8.3e-82 308.5 299 54.8
THA.LOC104798414 Tarenaya hassleriana HOM05D006143 ORTHO05D007587 4.1e-81 306.2 336 49.7
Medtr6g039570 Medicago truncatula HOM05D006143 ORTHO05D007587 9.2e-81 305.1 352 48.0
AUR62014918 Chenopodium quinoa HOM05D006143 ORTHO05D007587 1.2e-80 304.7 336 48.2
AUR62031125 Chenopodium quinoa HOM05D006143 ORTHO05D007587 1.2e-80 304.7 336 47.6
Ca_26041_v3 Cicer arietinum L. HOM05D006143 ORTHO05D007587 7.8e-80 302.0 323 48.6
Sopen02g022240 Solanum pennellii HOM05D006143 ORTHO05D007587 1.7e-79 300.8 340 49.1
Ah.01g004290 Amaranthus hybridus HOM05D006143 ORTHO05D007587 2.3e-79 300.4 352 46.6
Cc02_g14290 Coffea canephora HOM05D006143 ORTHO05D007587 2.9e-79 300.1 338 49.4
Solyc02g077320.4 Solanum lycopersicum HOM05D006143 ORTHO05D007587 2.5e-78 297.0 340 48.8
HanXRQChr11g0327231 Helianthus annuus HOM05D006143 ORTHO05D007587 5.6e-78 295.8 333 47.7
Aa31LG6G1190 Aethionema arabicum HOM05D006143 ORTHO05D007587 6.1e-77 292.4 336 49.7
Peaxi162Scf00875g00320 Petunia axillaris HOM05D006143 ORTHO05D007587 8.0e-77 292.0 361 46.8
CARHR225290 Cardamine hirsuta HOM05D006143 ORTHO05D007587 2.3e-76 290.4 336 48.8
Thhalv10025244m.g Eutrema salsugineum HOM05D006143 ORTHO05D007587 9.8e-75 285.0 336 47.9
AT4G18470 Arabidopsis thaliana HOM05D006143 ORTHO05D007587 2.9e-74 283.5 338 47.3
HPP92_003901 Vanilla planifolia HOM05D006143 ORTHO05D007587 6.4e-74 282.3 317 50.2
SGA_v2.0_scaffold16G07658 Striga asiatica HOM05D006143 ORTHO05D007587 1.4e-73 281.2 326 49.7
Nitab4.5_0011727g0010 Nicotiana tabacum HOM05D006143 ORTHO05D007587 2.4e-73 280.4 311 51.4
BolC1t01214H Brassica oleracea HOM05D006143 ORTHO05D007587 4.1e-73 279.6 336 46.7
Sp7g15570 Schrenkiella parvula HOM05D006143 ORTHO05D007587 4.1e-73 279.6 338 48.5
BcaC09g51506 Brassica carinata HOM05D006143 ORTHO05D007587 9.2e-73 278.5 336 46.4
C01p12400 Brassica napus HOM05D006143 ORTHO05D007587 2.0e-72 277.3 338 46.7
AL7G35830 Arabidopsis lyrata HOM05D006143 ORTHO05D007587 2.7e-72 276.9 336 46.7
Carub.0007s2278 Capsella rubella HOM05D006143 ORTHO05D007587 1.3e-71 274.6 336 45.8
BraA01t00988Z Brassica rapa HOM05D006143 ORTHO05D007587 3.0e-71 273.5 338 45.6
Os02g0312800 Oryza sativa ssp. japonica HOM05D006143 ORTHO05D007587 5.0e-71 272.7 338 45.0
Zm00001eb206790 Zea mays HOM05D006143 ORTHO05D007587 2.1e-69 267.3 336 43.5
BcaNung05875 Brassica carinata HOM05D006143 ORTHO05D007587 3.6e-69 266.5 338 44.4
A01p10420 Brassica napus HOM05D006143 ORTHO05D007587 4.4e-67 259.6 363 42.4
CDE02G0230 Ceratophyllum demersum HOM05D006143 ORTHO05D007587 2.3e-63 247.3 363 43.5
Nitab4.5_0000376g0080 Nicotiana tabacum HOM05D006143 ORTHO05D007587 1.5e-62 244.6 344 42.7
Sabra11G0042500 Salix brachista HOM05D006143 ORTHO05D007587 2.1e-61 240.7 334 43.4
Rhsim02G0153000 Rhododendron simsii HOM05D006143 ORTHO05D007587 1.2e-53 214.9 181 60.2
VMungo0251G1209 Vigna mungo HOM05D006143 ORTHO05D007587 2.0e-51 207.6 209 51.2
Eucgr.E02653 Eucalyptus grandis HOM05D006143 ORTHO05D007587 6.0e-48 196.1 204 51.0
unitig_699.g19338 Utricularia gibba HOM05D006143 ORTHO05D007587 1.0e-47 195.3 339 37.5
MD10G1285900 Malus domestica HOM05D006143 ORTHO05D007587 1.4e-36 158.3 215 42.3
HPP92_003867 Vanilla planifolia HOM05D006143 ORTHO05D007587 1.5e-35 154.8 258 39.1
RcHm_v2.0_Chr3g0476981 Rosa chinensis HOM05D006143 ORTHO05D007587 1.4e-28 131.7 187 41.2
TPR.G16261 Trifolium pratense HOM05D006143 ORTHO05D007587 1.8e-28 131.3 195 42.1
SEGI_30740 Sequoiadendron giganteum HOM05D006143 ORTHO05D007587 2.5e-25 120.9 162 37.0
SEGI_37534 Sequoiadendron giganteum HOM05D006143 ORTHO05D007587 2.5e-25 120.9 162 37.0
VMungo0251G1903 Vigna mungo HOM05D006143 ORTHO05D007587 2.7e-24 117.5 128 53.9
arahy.Tifrunner.gnm1.ann1.74Q5DQ Arachis hypogaea HOM05D006143 ORTHO05D007587 1.9e-22 111.3 108 48.1
Nn4g22609 Nelumbo nucifera HOM05D006143 ORTHO05D007587 1.8e-20 104.8 98 62.2
arahy.Tifrunner.gnm1.ann1.RYY8E4 Arachis hypogaea HOM05D006143 ORTHO05D007587 1.7e-18 98.2 77 55.8
arahy.Tifrunner.gnm1.ann1.VQL787 Arachis hypogaea HOM05D006143 ORTHO05D007587 1.7e-18 98.2 77 55.8
arahy.Tifrunner.gnm1.ann1.Y1II92 Arachis hypogaea HOM05D006143 ORTHO05D007587 1.7e-18 98.2 77 55.8
Pp3c13_1090 Physcomitrium patens HOM05D006143 ORTHO05D007587 1.9e-17 94.7 394 25.4
Mapoly0071s0015 Marchantia polymorpha HOM05D006143 ORTHO05D007587 7.9e-16 89.4 370 26.8
SHI28510 Sapria himalayana HOM05D006143 ORTHO05D007587 9.7e-14 82.4 134 37.3
arahy.Tifrunner.gnm1.ann1.6ZT1I9 Arachis hypogaea HOM05D006143 ORTHO05D007587 1.3e-13 82.0 60 58.3
AagrBONN_evm.TU.Sc2ySwM_344.2178 Anthoceros agrestis HOM05D006143 ORTHO05D007587 1.8e-12 78.2 390 25.4
Actinidia07619 Actinidia chinensis HOM05D006143 ORTHO05D007587 2.4e-12 77.8 118 40.7
MD10G1285800 Malus domestica HOM05D006143 ORTHO05D007587 5.3e-12 76.6 54 64.8
arahy.Tifrunner.gnm1.ann1.Y2C9I0 Arachis hypogaea HOM05D006143 ORTHO05D007587 2.6e-11 74.3 79 49.4
CSS0047646 Camellia sinensis var. sinensis HOM05D000493 ORTHO05D001638 7.2e-09 66.2 79 51.9
SMO117G0244 Selaginella moellendorffii HOM05D006143 ORTHO05D007587 1.6e-08 65.1 69 42.0
RcHm_v2.0_Chr3g0477111 Rosa chinensis HOM05D006143 ORTHO05D007587 6.7e-07 59.7 35 77.1


User provided reference genes

Program Settings