Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR625G1283 Trochodendron aralioides HOM05D005914 ORTHO05D007361 4.1e-234 814.3 393 100.0
Aqoxy7G02060 Aquilegia oxysepala HOM05D005914 ORTHO05D007361 2.3e-173 612.5 393 74.6
Cfa013180 Carpinus fangiana HOM05D005914 ORTHO05D007361 6.4e-171 604.4 392 74.5
QL02p022744 Quercus lobata HOM05D005914 ORTHO05D007361 1.9e-170 602.8 387 75.5
Haze_21570 Corylus avellana HOM05D005914 ORTHO05D007361 3.2e-170 602.1 392 74.5
CiPaw.07G220900 Carya illinoinensis HOM05D005914 ORTHO05D007361 2.8e-166 589.0 392 72.7
Thecc.09G149100 Theobroma cacao HOM05D005914 ORTHO05D007361 8.1e-166 587.4 391 71.1
Ciclev10008576m.g Citrus clementina HOM05D005914 ORTHO05D007361 4.0e-165 585.1 390 72.6
PSO170G3156 Papaver somniferum HOM05D005914 ORTHO05D007361 3.2e-162 575.5 395 71.6
GSVIVG01035808001 Vitis vinifera HOM05D005914 ORTHO05D007361 3.2e-162 575.5 393 72.0
CANSAT80G0109 Cannabis sativa HOM05D005914 ORTHO05D007361 1.0e-160 570.5 392 72.2
THA.LOC104799221 Tarenaya hassleriana HOM05D005914 ORTHO05D007361 2.3e-160 569.3 388 71.1
TWI63G0300 Tripterygium wilfordii HOM05D005914 ORTHO05D007361 2.3e-160 569.3 383 71.5
CANSAT80G2406 Cannabis sativa HOM05D005914 ORTHO05D007361 1.5e-159 566.6 392 71.9
CSS0046358 Camellia sinensis var. sinensis HOM05D005914 ORTHO05D007361 3.3e-159 565.5 385 72.2
Gohir.A08G236800 Gossypium hirsutum HOM05D005914 ORTHO05D007361 4.3e-159 565.1 393 68.7
Actinidia22373 Actinidia chinensis HOM05D005914 ORTHO05D007361 1.2e-158 563.5 393 71.2
Sabra06G0196100 Salix brachista HOM05D005914 ORTHO05D007361 1.6e-158 563.1 387 71.8
RcHm_v2.0_Chr6g0298621 Rosa chinensis HOM05D005914 ORTHO05D007361 2.1e-158 562.8 389 71.5
Gorai.004G274400 Gossypium raimondii HOM05D005914 ORTHO05D007361 4.7e-158 561.6 388 69.1
Potri.006G250800 Populus trichocarpa HOM05D005914 ORTHO05D007361 1.1e-157 560.5 387 72.1
Atru.chr7.2376 Acer truncatum HOM05D005914 ORTHO05D007361 2.6e-156 555.8 387 69.8
Rhsim02G0194500 Rhododendron simsii HOM05D005914 ORTHO05D007361 9.9e-156 553.9 393 70.0
MD15G1120500 Malus domestica HOM05D005914 ORTHO05D007361 1.7e-155 553.1 387 70.8
MELO3C011235.2 Cucumis melo HOM05D005914 ORTHO05D007361 4.1e-154 548.5 393 69.2
C07p42340 Brassica napus HOM05D005914 ORTHO05D007361 5.4e-154 548.1 383 70.8
Carub.0006s2334 Capsella rubella HOM05D005914 ORTHO05D007361 2.3e-152 542.7 380 70.3
FvH4_2g29650 Fragaria vesca HOM05D005914 ORTHO05D007361 2.3e-152 542.7 393 69.2
FAN24G3193 Fragaria x ananassa HOM05D005914 ORTHO05D007361 3.0e-152 542.3 393 69.2
Nn2g11936 Nelumbo nucifera HOM05D005914 ORTHO05D007361 3.9e-152 542.0 364 74.2
ClCG08G013130 Citrullus lanatus HOM05D005914 ORTHO05D007361 8.6e-152 540.8 393 67.9
Eucgr.C01789 Eucalyptus grandis HOM05D005914 ORTHO05D007361 1.1e-151 540.4 395 67.6
Duzib150G0329 Durio zibethinus HOM05D005914 ORTHO05D007361 1.9e-151 539.7 393 67.4
Thhalv10004397m.g Eutrema salsugineum HOM05D005914 ORTHO05D007361 7.3e-151 537.7 388 70.1
AL6G37280 Arabidopsis lyrata HOM05D005914 ORTHO05D007361 1.1e-149 533.9 380 69.5
EL10Ac2g02591 Beta vulgaris HOM05D005914 ORTHO05D007361 1.4e-149 533.5 392 67.6
PGR142G2371 Punica granatum HOM05D005914 ORTHO05D007361 4.0e-149 531.9 383 68.7
AT5G25480 Arabidopsis thaliana HOM05D005914 ORTHO05D007361 1.2e-148 530.4 380 68.4
BraA06t26540Z Brassica rapa HOM05D005914 ORTHO05D007361 2.6e-148 529.3 380 69.5
A06p36180 Brassica napus HOM05D005914 ORTHO05D007361 3.4e-148 528.9 381 69.3
Sp2g22050 Schrenkiella parvula HOM05D005914 ORTHO05D007361 1.7e-147 526.6 386 68.1
Aa31LG11G4850 Aethionema arabicum HOM05D005914 ORTHO05D007361 6.4e-147 524.6 378 68.3
Migut.E01476 Erythranthe guttata HOM05D005914 ORTHO05D007361 1.9e-146 523.1 390 65.6
arahy.Tifrunner.gnm1.ann1.J9LH1L Arachis hypogaea HOM05D005914 ORTHO05D007361 2.4e-146 522.7 392 67.6
SGA_v2.0_scaffold4G02186 Striga asiatica HOM05D005914 ORTHO05D007361 3.2e-146 522.3 386 66.1
CAN.G98.27 Capsicum annuum HOM05D005914 ORTHO05D007361 7.8e-145 517.7 382 67.3
Glyma.15G054900 Glycine max HOM05D005914 ORTHO05D007361 7.8e-145 517.7 379 69.1
Ca_00145_v3 Cicer arietinum L. HOM05D005914 ORTHO05D007361 2.3e-144 516.2 379 68.1
Cc11_g01820 Coffea canephora HOM05D005914 ORTHO05D007361 3.0e-144 515.8 393 64.9
Solyc08g067070.3 Solanum lycopersicum HOM05D005914 ORTHO05D007361 3.0e-144 515.8 387 66.7
Lalb_Chr20g0122961 Lupinus albus HOM05D005914 ORTHO05D007361 1.1e-143 513.8 383 68.4
CDE04G0852 Ceratophyllum demersum HOM05D005914 ORTHO05D007361 1.9e-143 513.1 392 65.1
arahy.Tifrunner.gnm1.ann1.T9E77A Arachis hypogaea HOM05D005914 ORTHO05D007361 3.3e-143 512.3 389 67.1
Lj6g0019162 Lotus japonicus HOM05D005914 ORTHO05D007361 3.3e-143 512.3 378 67.5
Sopen08g021020 Solanum pennellii HOM05D005914 ORTHO05D007361 5.6e-143 511.5 388 66.2
Medtr2g009140 Medicago truncatula HOM05D005914 ORTHO05D007361 1.6e-142 510.0 377 67.1
Psat1g215880 Pisum sativum HOM05D005914 ORTHO05D007361 1.6e-142 510.0 377 67.1
VMungo0540G0716 Vigna mungo HOM05D005914 ORTHO05D007361 1.4e-141 506.9 385 65.5
HanXRQChr13g0402741 Helianthus annuus HOM05D005914 ORTHO05D007361 1.8e-141 506.5 385 64.2
COL.COLO4_23983 Corchorus olitorius HOM05D005914 ORTHO05D007361 2.4e-141 506.1 393 64.6
Gohir.D08G257400 Gossypium hirsutum HOM05D005914 ORTHO05D007361 2.2e-139 499.6 388 63.4
Nitab4.5_0000151g0200 Nicotiana tabacum HOM05D005914 ORTHO05D007361 1.6e-137 493.4 385 64.7
DCAR_006234 Daucus carota HOM05D005914 ORTHO05D007361 1.0e-136 490.7 415 62.2
Nitab4.5_0001669g0040 Nicotiana tabacum HOM05D005914 ORTHO05D007361 1.5e-135 486.9 382 63.9
Sed0010731 Sechium edule HOM05D005914 ORTHO05D007361 1.3e-134 483.8 367 65.4
HPP92_012620 Vanilla planifolia HOM05D005914 ORTHO05D007361 1.3e-134 483.8 388 64.2
Lsat_1_v5_gn_6_22181 Lactuca sativa HOM05D005914 ORTHO05D007361 6.2e-134 481.5 378 64.0
ECA233G4604 Erigeron canadensis HOM05D005914 ORTHO05D007361 5.8e-132 474.9 377 61.8
arahy.Tifrunner.gnm1.ann1.71PCZ9 Arachis hypogaea HOM05D005914 ORTHO05D007361 1.4e-130 470.3 360 66.4
Zm00001eb358040 Zea mays HOM05D005914 ORTHO05D007361 3.2e-130 469.2 383 61.9
BolC7t44763H Brassica oleracea HOM05D005914 ORTHO05D007361 5.5e-130 468.4 344 68.0
Dinv11618 Davidia involucrata HOM05D005914 ORTHO05D007361 1.2e-129 467.2 300 75.3
unitig_747.g21653 Utricularia gibba HOM05D005914 ORTHO05D007361 3.5e-129 465.7 388 59.5
Prupe.1G473200 Prunus persica HOM05D005914 ORTHO05D007361 4.3e-127 458.8 321 71.3
Manes.16G119400 Manihot esculenta HOM05D005914 ORTHO05D007361 6.2e-126 454.9 319 70.8
SalBow2G3472 Salvia bowleyana HOM05D005914 ORTHO05D007361 9.0e-125 451.1 384 59.6
Peaxi162Scf00341g00624 Petunia axillaris HOM05D005914 ORTHO05D007361 3.8e-123 445.7 345 63.2
AUR62024878 Chenopodium quinoa HOM05D005914 ORTHO05D007361 1.6e-121 440.3 373 61.4
TPR.G25250 Trifolium pratense HOM05D005914 ORTHO05D008190 2.5e-111 406.4 310 63.9
CsaV3_2G031850 Cucumis sativus L. HOM05D005914 ORTHO05D007361 5.7e-111 405.2 402 54.5
PSO455G0041 Papaver somniferum HOM05D005914 ORTHO05D007361 6.9e-109 398.3 295 69.2
ATR0815G040 Amborella trichopoda HOM05D005914 ORTHO05D007361 1.5e-108 397.1 348 58.9
Mapoly0011s0185 Marchantia polymorpha HOM05D005914 ORTHO05D007361 3.2e-106 389.4 449 48.6
SMO146G0196 Selaginella moellendorffii HOM05D005914 ORTHO05D007361 1.1e-101 374.4 383 52.2
Pp3c12_2410 Physcomitrium patens HOM05D005914 ORTHO05D007361 1.8e-101 373.6 464 45.3
AUR62030669 Chenopodium quinoa HOM05D005914 ORTHO05D007361 9.4e-98 361.3 323 57.3
Phvul.006G205000 Phaseolus vulgaris HOM05D005914 ORTHO05D007361 4.7e-97 359.0 296 62.5
FAN27G2538 Fragaria x ananassa HOM05D005914 ORTHO05D007361 1.3e-94 350.9 378 52.9
MBI04_g29855_MAGBIO Magnolia biondii HOM05D005914 ORTHO05D007361 1.3e-83 314.3 263 63.5
CBR_g3173 Chara braunii HOM05D005914 ORTHO05D007361 1.5e-82 310.8 539 37.7
FAN20G2480 Fragaria x ananassa HOM05D005914 ORTHO05D007361 3.6e-81 306.2 375 47.5
MSTRG.13986 Avicennia marina HOM05D005914 ORTHO05D007361 6.8e-80 302.0 246 62.6
Os01g0612000 Oryza sativa ssp. japonica HOM05D005914 ORTHO05D007361 2.4e-77 293.5 287 54.0
MD08G1143700 Malus domestica HOM05D005914 ORTHO05D007361 3.1e-77 293.1 284 56.0
Lj7C718G14 Lonicera japonica HOM05D005914 ORTHO05D007361 5.0e-75 285.8 270 56.7
MBI04_g46184_MAGBIO Magnolia biondii HOM05D005914 ORTHO05D007361 3.2e-74 283.1 343 49.0
AagrBONN_evm.TU.Sc2ySwM_228.810 Anthoceros agrestis HOM05D005914 ORTHO05D007361 1.7e-70 270.8 299 51.2
Hma1.2p1_0000F.1_g000780 Hydrangea macrophylla HOM05D005914 ORTHO05D007361 6.3e-70 268.9 220 63.6
MCO14G456 Micromonas commoda HOM05D005914 ORTHO05D007361 1.1e-69 268.1 391 41.2
CARHR187910 Cardamine hirsuta HOM05D005914 ORTHO05D007361 2.4e-69 266.9 165 75.2
Cpa.g.sc91.41 Carica papaya HOM05D005914 ORTHO05D007361 2.3e-67 260.4 172 73.8
PRCOL_00003212 Prasinoderma coloniale HOM05D005914 ORTHO05D007361 5.0e-67 259.2 445 37.5
RcHm_v2.0_Chr1g0355831 Rosa chinensis HOM05D005914 ORTHO05D007361 6.8e-64 248.8 258 54.7
Ah.12g063960 Amaranthus hybridus HOM05D005914 ORTHO05D007361 1.2e-60 238.0 165 69.1
MD15G1439700 Malus domestica HOM05D005914 ORTHO05D007361 3.4e-55 219.9 406 38.2
Glyma.08G177800 Glycine max HOM05D005914 ORTHO05D007361 2.0e-47 194.1 201 52.2
SEGI_35502 Sequoiadendron giganteum HOM05D005914 ORTHO05D007361 1.3e-46 191.4 111 82.0
MCO11G560 Micromonas commoda HOM05D005914 ORTHO05D007361 6.6e-43 179.1 413 32.2
Nitab4.5_0003498g0080 Nicotiana tabacum HOM05D005914 ORTHO05D007361 1.1e-40 171.8 324 38.9
CAN.G374.12 Capsicum annuum HOM05D005914 ORTHO05D007361 4.4e-31 139.8 312 32.7
Sc09g0008460 Simmondsia chinensis HOM05D005914 ORTHO05D007361 1.1e-29 135.2 141 48.2
Cre12.g484600 Chlamydomonas reinhardtii HOM05D005914 ORTHO05D007361 2.4e-29 134.0 180 41.7
PGR031G2948 Punica granatum HOM05D005914 ORTHO05D007361 5.4e-29 132.9 82 72.0
Sc09g0008450 Simmondsia chinensis HOM05D005914 ORTHO05D007361 9.3e-29 132.1 80 77.5
Oeu033137.1 Olea europaea HOM05D005914 ORTHO05D007361 4.3e-26 123.2 84 72.6
Sc09g0008580 Simmondsia chinensis HOM05D005914 ORTHO05D007361 5.6e-26 122.9 80 71.2
Sc09g0008440 Simmondsia chinensis HOM05D005914 ORTHO05D007361 7.3e-26 122.5 96 62.5
Aqoxy7G02061 Aquilegia oxysepala HOM05D005914 ORTHO05D007361 2.0e-23 114.4 62 83.9
TPR.G22731 Trifolium pratense HOM05D005914 ORTHO05D007361 7.6e-23 112.5 69 81.2
SEGI_14251 Sequoiadendron giganteum HOM05D005914 ORTHO05D007361 5.1e-19 99.8 75 66.7
Ah.12g063950 Amaranthus hybridus HOM05D005914 ORTHO05D007361 1.4e-16 91.7 122 44.3
Sc09g0008540 Simmondsia chinensis HOM05D002899 ORTHO05D003850 1.4e-16 91.7 65 69.2
MBI04_g10409_MAGBIO Magnolia biondii HOM05D005914 ORTHO05D007361 3.4e-15 87.0 83 50.6
MBI04_g46185_MAGBIO Magnolia biondii HOM05D005914 ORTHO05D007361 7.6e-15 85.9 54 66.7
SEGI_16557 Sequoiadendron giganteum HOM05D005914 ORTHO05D007361 7.1e-13 79.3 68 58.8
Sc09g0008600 Simmondsia chinensis HOM05D005914 ORTHO05D007361 2.3e-11 74.3 45 71.1
Ah.12g063940 Amaranthus hybridus HOM05D005914 ORTHO05D007361 4.3e-10 70.1 67 50.7
MD08G1144900 Malus domestica HOM05D005914 ORTHO05D007361 3.7e-09 67.0 87 39.1
Glyma.08G177700 Glycine max HOM05D005914 ORTHO05D007361 2.6e-07 60.8 28 92.9
Lj7A718T66 Lonicera japonica HOM05D005914 ORTHO05D007361 7.6e-07 59.3 55 58.2
MD08G1143600 Malus domestica HOM05D005914 ORTHO05D007361 2.9e-06 57.4 67 41.8


User provided reference genes

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