Gene: COL.COLO4_23983

General Information

Structural Information

  • Species Corchorus olitorius
  • Gene Identifier COL.COLO4_23983
  • Transcript Identifier COL.rna22723
  • Gene Type Coding gene
  • Location AWUE01018394.1 : 531-3008 : positive

Gene Family Information

  • ID HOM05D005914
  • #Genes/#Species 133/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid rna22723
  • GenBank OMO80678.1
  • id gene23955
  • gene_name COLO4_23983
  • uniprot A0A1R3IDN8

Descriptions

  • Description C-5 cytosine methyltransferase
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0032259
IEA
GOA Databasemethylation
GO:0010154
ISO
PLAZA Integrative Orthologyfruit development Solyc08g067070.3
GO:0045814
ISO
PLAZA Integrative Orthologynegative regulation of gene expression, epigenetic AT5G25480
GO:0009836
ISO
PLAZA Integrative Orthologyfruit ripening, climacteric Solyc08g067070.3

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016740
IEA
GOA Databasetransferase activity
GO:0008168
IEA
GOA Databasemethyltransferase activity
GO:0008168
IEA
InterPromethyltransferase activity
GO:0003886
ISO
PLAZA Integrative OrthologyDNA (cytosine-5-)-methyltransferase activity Solyc08g067070.3
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G25480

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT5G25480

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR029063 S-adenosyl-L-methionine-dependent methyltransferase
IPR001525 C-5 cytosine methyltransferase
Mapman id Description
35.1 not assigned.annotated