Gene: Thhalv10004397m.g

General Information

Structural Information

  • Species Eutrema salsugineum
  • Gene Identifier Thhalv10004397m.g
  • Transcript Identifier Thhalv10004397m
  • Gene Type Coding gene
  • Location scaffold_6 : 3617009-3619481 : negative

Gene Family Information

  • ID HOM05D005914
  • #Genes/#Species 133/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Thhalv10004397m.g.v1.0
  • pacid 20200197

Descriptions

  • Description K15336 - tRNA (cytosine38-C5)-methyltransferase [EC:2.1.1.204] (TRDMT1, DNMT2)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0010154
ISO
PLAZA Integrative Orthologyfruit development Solyc08g067070.3
GO:0045814
ISO
PLAZA Integrative Orthologynegative regulation of gene expression, epigenetic AT5G25480
GO:0009836
ISO
PLAZA Integrative Orthologyfruit ripening, climacteric Solyc08g067070.3

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008168
IEA
InterPromethyltransferase activity
GO:0003886
ISO
PLAZA Integrative OrthologyDNA (cytosine-5-)-methyltransferase activity Solyc08g067070.3
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G25480

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT5G25480

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001525 C-5 cytosine methyltransferase
IPR029063 S-adenosyl-L-methionine-dependent methyltransferase
Mapman id Description
35.1 not assigned.annotated