Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR624G0741 Trochodendron aralioides HOM05D005962 ORTHO05D007325 7.9e-86 320.5 168 100.0
TAR623G1297 Trochodendron aralioides HOM05D005962 ORTHO05D007325 1.2e-33 147.1 146 59.6
GSVIVG01016927001 Vitis vinifera HOM05D005962 ORTHO05D007325 9.4e-31 137.5 145 56.6
Prupe.3G054900 Prunus persica HOM05D005962 ORTHO05D007325 4.8e-27 125.2 145 54.5
Phvul.010G143300 Phaseolus vulgaris HOM05D005962 ORTHO05D007325 8.3e-27 124.4 157 51.6
Glyma.08G199200 Glycine max HOM05D005962 ORTHO05D007325 7.0e-26 121.3 157 51.0
MBI01_g35895_MAGBIO Magnolia biondii HOM05D005962 ORTHO05D007325 7.0e-26 121.3 146 53.4
Psat4g195960 Pisum sativum HOM05D005962 ORTHO05D007325 7.0e-26 121.3 114 60.5
Haze_15888 Corylus avellana HOM05D005962 ORTHO05D007325 1.2e-25 120.6 145 51.7
Medtr8g015230 Medicago truncatula HOM05D005962 ORTHO05D007325 1.6e-25 120.2 114 59.6
Sabra17G0126400 Salix brachista HOM05D005962 ORTHO05D007325 1.6e-25 120.2 156 48.7
CiPaw.02G144100 Carya illinoinensis HOM05D005962 ORTHO05D007325 2.0e-25 119.8 145 51.7
CSS0027495 Camellia sinensis var. sinensis HOM05D005962 ORTHO05D007325 2.7e-25 119.4 144 50.0
Cfa019373 Carpinus fangiana HOM05D005962 ORTHO05D007325 2.7e-25 119.4 145 51.0
TPR.G39766 Trifolium pratense HOM05D005962 ORTHO05D007325 3.5e-25 119.0 114 58.8
VMungo0331G0822 Vigna mungo HOM05D005962 ORTHO05D007325 3.5e-25 119.0 160 50.6
Sed0025844 Sechium edule HOM05D005962 ORTHO05D007325 7.7e-25 117.9 143 53.8
Lj3g0005277 Lotus japonicus HOM05D005962 ORTHO05D007325 2.2e-24 116.3 160 50.0
PSO210G0258 Papaver somniferum HOM05D005962 ORTHO05D007325 2.2e-24 116.3 113 58.4
Nn4g25123 Nelumbo nucifera HOM05D005962 ORTHO05D007325 2.9e-24 115.9 146 50.0
Ca_23283_v3 Cicer arietinum L. HOM05D005962 ORTHO05D007325 3.8e-24 115.5 120 55.8
Gohir.D01G215700 Gossypium hirsutum HOM05D005962 ORTHO05D007325 3.8e-24 115.5 157 47.1
Gorai.002G261900 Gossypium raimondii HOM05D005962 ORTHO05D007325 3.8e-24 115.5 157 47.1
Ciclev10026335m.g Citrus clementina HOM05D005962 ORTHO05D007325 5.0e-24 115.2 146 47.9
Actinidia32123 Actinidia chinensis HOM05D005962 ORTHO05D007325 6.5e-24 114.8 146 48.6
Thecc.06G103400 Theobroma cacao HOM05D005962 ORTHO05D007325 1.9e-23 113.2 114 58.8
Rhsim08G0229500 Rhododendron simsii HOM05D005962 ORTHO05D007325 2.5e-23 112.8 144 47.2
QL08p056642 Quercus lobata HOM05D005962 ORTHO05D007325 4.2e-23 112.1 142 49.3
Atru.chr12.732 Acer truncatum HOM05D005962 ORTHO05D007325 5.5e-23 111.7 157 48.4
Gohir.A10G063800 Gossypium hirsutum HOM05D005962 ORTHO05D007325 5.5e-23 111.7 158 50.0
ClCG07G013490 Citrullus lanatus HOM05D005962 ORTHO05D007325 9.4e-23 110.9 143 51.7
MELO3C013015.2 Cucumis melo HOM05D005962 ORTHO05D007325 1.2e-22 110.5 143 51.7
Gohir.D10G065400 Gossypium hirsutum HOM05D005962 ORTHO05D007325 1.6e-22 110.2 153 49.7
Lj5A50T68 Lonicera japonica HOM05D005962 ORTHO05D007325 1.6e-22 110.2 145 48.3
Manes.11G030300 Manihot esculenta HOM05D005962 ORTHO05D007325 1.6e-22 110.2 145 49.0
CANSAT21G1984 Cannabis sativa HOM05D005962 ORTHO05D007325 2.7e-22 109.4 146 47.3
PSO210G7608 Papaver somniferum HOM05D005962 ORTHO05D007325 2.7e-22 109.4 113 54.9
Rhsim08G0229700 Rhododendron simsii HOM05D005962 ORTHO05D007325 2.7e-22 109.4 144 45.8
Gorai.011G069400 Gossypium raimondii HOM05D005962 ORTHO05D007325 3.6e-22 109.0 157 48.4
COL.COLO4_30547 Corchorus olitorius HOM05D005962 ORTHO05D007325 4.7e-22 108.6 158 47.5
Aqoxy2G04031 Aquilegia oxysepala HOM05D005962 ORTHO05D007325 6.1e-22 108.2 147 50.3
Duzib192G0276 Durio zibethinus HOM05D005962 ORTHO05D007325 6.1e-22 108.2 157 47.1
vmacro18833 Vaccinium macrocarpon HOM05D005962 ORTHO05D007325 6.1e-22 108.2 144 47.2
DCAR_007600 Daucus carota HOM05D005962 ORTHO05D007325 8.0e-22 107.8 146 47.3
Eucgr.J02602 Eucalyptus grandis HOM05D005962 ORTHO05D007325 1.0e-21 107.5 145 49.0
CsaV3_3G023410 Cucumis sativus L. HOM05D005962 ORTHO05D007325 1.4e-21 107.1 142 50.7
RcHm_v2.0_Chr2g0141751 Rosa chinensis HOM05D005962 ORTHO05D007325 1.4e-21 107.1 146 48.6
Cc00_g23930 Coffea canephora HOM05D005962 ORTHO05D007325 1.8e-21 106.7 145 48.3
Sc19g0007830 Simmondsia chinensis HOM05D005962 ORTHO05D007325 2.3e-21 106.3 145 46.2
arahy.Tifrunner.gnm1.ann1.FEFU12 Arachis hypogaea HOM05D005962 ORTHO05D007325 5.2e-21 105.1 155 44.5
arahy.Tifrunner.gnm1.ann1.M52QXX Arachis hypogaea HOM05D005962 ORTHO05D007325 5.2e-21 105.1 155 45.2
Lalb_Chr01g0013231 Lupinus albus HOM05D005962 ORTHO05D007325 5.2e-21 105.1 157 45.2
TWI12G1051 Tripterygium wilfordii HOM05D005962 ORTHO05D007325 8.8e-21 104.4 164 44.5
FvH4_6g32730 Fragaria vesca HOM05D005962 ORTHO05D007325 1.2e-20 104.0 147 49.0
Manes.04G136400 Manihot esculenta HOM05D005962 ORTHO05D007325 2.0e-20 103.2 145 49.0
SalBow6G5073 Salvia bowleyana HOM05D005962 ORTHO05D007325 3.4e-20 102.4 143 49.7
Migut.I00971 Erythranthe guttata HOM05D005962 ORTHO05D007325 4.4e-20 102.1 144 49.3
FAN09G1055 Fragaria x ananassa HOM05D005962 ORTHO05D007325 4.4e-20 102.1 147 48.3
FAN05G1114 Fragaria x ananassa HOM05D005962 ORTHO05D007325 5.7e-20 101.7 147 48.3
HanXRQChr15g0489361 Helianthus annuus HOM05D005962 ORTHO05D007325 7.5e-20 101.3 113 50.4
Peaxi162Scf00038g01151 Petunia axillaris HOM05D005962 ORTHO05D007325 9.8e-20 100.9 144 47.9
CAN.G1143.30 Capsicum annuum HOM05D005962 ORTHO05D007325 1.3e-19 100.5 144 45.1
Oeu024256.1 Olea europaea HOM05D005962 ORTHO05D007325 1.3e-19 100.5 146 46.6
FAN02G1749 Fragaria x ananassa HOM05D005962 ORTHO05D007325 1.7e-19 100.1 147 47.6
Nitab4.5_0002423g0030 Nicotiana tabacum HOM05D005962 ORTHO05D007325 1.7e-19 100.1 144 45.8
MD14G1079700 Malus domestica HOM05D005962 ORTHO05D007325 2.8e-19 99.4 111 59.5
Nitab4.5_0001172g0180 Nicotiana tabacum HOM05D005962 ORTHO05D007325 1.1e-18 97.4 145 46.2
MSTRG.11013 Avicennia marina HOM05D005962 ORTHO05D007325 2.4e-18 96.3 145 47.6
Solyc12g044640.2 Solanum lycopersicum HOM05D005962 ORTHO05D007325 2.4e-18 96.3 144 45.8
PGR102G2175 Punica granatum HOM05D005962 ORTHO05D007325 3.1e-18 95.9 114 50.0
PGSC0003DMG401002516 Solanum tuberosum HOM05D005962 ORTHO05D007325 3.1e-18 95.9 144 45.1
HPP92_007682 Vanilla planifolia HOM05D005962 ORTHO05D007325 4.1e-18 95.5 157 42.7
ECA248G1573 Erigeron canadensis HOM05D005962 ORTHO05D007325 5.4e-18 95.1 138 43.5
Sopen12g023060 Solanum pennellii HOM05D005962 ORTHO05D007325 1.2e-17 94.0 112 55.4
EL10Ac3g07358 Beta vulgaris HOM05D005962 ORTHO05D007325 2.7e-17 92.8 145 44.1
Hma1.2p1_0764F.1_g214960 Hydrangea macrophylla HOM05D005962 ORTHO05D007325 3.5e-17 92.4 145 46.9
PGSC0003DMG400026839 Solanum tuberosum HOM05D005962 ORTHO05D007325 3.5e-17 92.4 143 44.8
Hma1.2p1_2308F.1_g319480 Hydrangea macrophylla HOM05D005962 ORTHO05D007325 1.7e-16 90.1 145 46.2
unitig_32.g10986 Utricularia gibba HOM05D005962 ORTHO05D007325 6.6e-16 88.2 145 45.5
Lsat_1_v5_gn_5_181040 Lactuca sativa HOM05D005962 ORTHO05D007325 1.1e-15 87.4 136 41.9
Sopen03g040020 Solanum pennellii HOM05D005962 ORTHO05D007325 3.3e-15 85.9 144 42.4
AUR62020986 Chenopodium quinoa HOM05D005962 ORTHO05D007325 9.5e-15 84.3 145 40.0
SHI11207 Sapria himalayana HOM05D005962 ORTHO05D007325 1.6e-14 83.6 115 48.7
Os06g0217500 Oryza sativa ssp. japonica HOM05D005962 ORTHO05D007325 4.7e-14 82.0 153 38.6
Sp3g19410 Schrenkiella parvula HOM05D005962 ORTHO05D007325 1.8e-13 80.1 145 41.4
Aa31LG8G8050 Aethionema arabicum HOM05D005962 ORTHO05D007325 2.0e-12 76.6 145 40.7
Thhalv10021373m.g Eutrema salsugineum HOM05D005962 ORTHO05D007325 2.0e-12 76.6 145 42.1
BcaB06g26231 Brassica carinata HOM05D005962 ORTHO05D007325 4.4e-12 75.5 145 40.7
Zm00001eb372970 Zea mays HOM05D005962 ORTHO05D007325 9.8e-12 74.3 153 39.9
THA.LOC104805924 Tarenaya hassleriana HOM05D005962 ORTHO05D007325 2.2e-11 73.2 145 40.0
BcaC05g28175 Brassica carinata HOM05D005962 ORTHO05D007325 2.9e-11 72.8 145 38.6
AUR62018448 Chenopodium quinoa HOM05D005962 ORTHO05D007325 2.9e-11 72.8 145 36.6
A05p27250 Brassica napus HOM05D005962 ORTHO05D007325 4.9e-11 72.0 145 41.4
C05p42110 Brassica napus HOM05D005962 ORTHO05D007325 4.9e-11 72.0 145 40.7
CARHR097270 Cardamine hirsuta HOM05D005962 ORTHO05D007325 1.1e-10 70.9 145 37.9
Ah.04g150130 Amaranthus hybridus HOM05D000535 ORTHO05D000427 1.8e-10 70.1 79 48.1
Carub.0003s2138 Capsella rubella HOM05D005962 ORTHO05D007325 2.4e-10 69.7 145 37.9
AL3G35400 Arabidopsis lyrata HOM05D005962 ORTHO05D007325 3.2e-10 69.3 145 39.3
Dinv30417 Davidia involucrata HOM05D000106 ORTHO05D000160 4.1e-10 68.9 78 56.4
AT3G21350 Arabidopsis thaliana HOM05D005962 ORTHO05D007325 9.2e-10 67.8 145 40.7
Dinv37956 Davidia involucrata HOM05D005962 ORTHO05D007325 9.2e-10 67.8 111 44.1
Cpa.g.c26718.1 Carica papaya HOM05D005962 ORTHO05D007325 3.5e-09 65.9 54 64.8
BraA05t21615Z Brassica rapa HOM05D005962 ORTHO05D007325 5.9e-09 65.1 155 36.8
BolC5t32941H Brassica oleracea HOM05D005962 ORTHO05D007325 4.7e-06 55.5 77 49.4
Medtr0361s0030 Medicago truncatula HOM05D005962 ORTHO05D007325 4.7e-06 55.5 37 78.4
SGA_v2.0_scaffold45G16998 Striga asiatica HOM05D005962 ORTHO05D007325 4.7e-06 55.5 64 48.4
Solyc03g121210.4 Solanum lycopersicum HOM05D005962 ORTHO05D007325 8.0e-06 54.7 106 36.8


User provided reference genes

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