Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR623G1297 Trochodendron aralioides HOM05D005962 ORTHO05D007325 1.3e-148 529.6 259 100.0
Nn4g25123 Nelumbo nucifera HOM05D005962 ORTHO05D007325 2.1e-122 442.6 259 84.6
MBI01_g35895_MAGBIO Magnolia biondii HOM05D005962 ORTHO05D007325 1.0e-121 440.3 259 83.4
vmacro18833 Vaccinium macrocarpon HOM05D005962 ORTHO05D007325 1.2e-120 436.8 258 83.3
Rhsim08G0229500 Rhododendron simsii HOM05D005962 ORTHO05D007325 1.5e-120 436.4 258 83.3
Rhsim08G0229700 Rhododendron simsii HOM05D005962 ORTHO05D007325 7.0e-118 427.6 271 79.0
DCAR_007600 Daucus carota HOM05D005962 ORTHO05D007325 2.0e-117 426.0 260 81.2
GSVIVG01016927001 Vitis vinifera HOM05D005962 ORTHO05D007325 6.0e-117 424.5 228 92.5
Aqoxy2G04031 Aquilegia oxysepala HOM05D005962 ORTHO05D007325 4.3e-115 418.3 266 81.6
Actinidia32123 Actinidia chinensis HOM05D005962 ORTHO05D007325 5.6e-115 417.9 260 80.0
Thecc.06G103400 Theobroma cacao HOM05D005962 ORTHO05D007325 1.2e-114 416.8 260 80.8
Haze_15888 Corylus avellana HOM05D005962 ORTHO05D007325 2.1e-114 416.0 252 82.1
Sabra17G0126400 Salix brachista HOM05D005962 ORTHO05D007325 1.4e-113 413.3 263 78.7
Sc19g0007830 Simmondsia chinensis HOM05D005962 ORTHO05D007325 3.1e-113 412.1 258 79.1
Phvul.010G143300 Phaseolus vulgaris HOM05D005962 ORTHO05D007325 4.0e-113 411.8 249 82.7
Prupe.3G054900 Prunus persica HOM05D005962 ORTHO05D007325 4.0e-113 411.8 259 80.3
CSS0027495 Camellia sinensis var. sinensis HOM05D005962 ORTHO05D007325 1.5e-112 409.8 226 88.9
Glyma.08G199200 Glycine max HOM05D005962 ORTHO05D007325 1.5e-112 409.8 249 81.5
Gohir.D01G215700 Gossypium hirsutum HOM05D005962 ORTHO05D007325 1.5e-112 409.8 253 81.8
QL08p056642 Quercus lobata HOM05D005962 ORTHO05D007325 2.6e-112 409.1 250 82.0
PSO210G0258 Papaver somniferum HOM05D005962 ORTHO05D007325 7.5e-112 407.5 256 79.3
VMungo0331G0822 Vigna mungo HOM05D005962 ORTHO05D007325 7.5e-112 407.5 252 81.7
COL.COLO4_30547 Corchorus olitorius HOM05D005962 ORTHO05D007325 9.8e-112 407.1 259 79.5
Manes.11G030300 Manihot esculenta HOM05D005962 ORTHO05D007325 1.3e-111 406.8 244 82.0
Oeu024256.1 Olea europaea HOM05D005962 ORTHO05D007325 1.3e-111 406.8 264 79.2
CiPaw.02G144100 Carya illinoinensis HOM05D005962 ORTHO05D007325 1.7e-111 406.4 260 79.6
CANSAT21G1984 Cannabis sativa HOM05D005962 ORTHO05D007325 4.9e-111 404.8 261 77.8
Solyc12g044640.2 Solanum lycopersicum HOM05D005962 ORTHO05D007325 6.4e-111 404.4 258 78.7
Cc00_g23930 Coffea canephora HOM05D005962 ORTHO05D007325 1.1e-110 403.7 260 80.0
Atru.chr12.732 Acer truncatum HOM05D005962 ORTHO05D007325 4.1e-110 401.7 244 82.0
Hma1.2p1_0764F.1_g214960 Hydrangea macrophylla HOM05D005962 ORTHO05D007325 4.1e-110 401.7 260 78.8
PSO210G7608 Papaver somniferum HOM05D005962 ORTHO05D007325 4.1e-110 401.7 256 78.1
Psat4g195960 Pisum sativum HOM05D005962 ORTHO05D007325 4.1e-110 401.7 248 79.0
Manes.04G136400 Manihot esculenta HOM05D005962 ORTHO05D007325 9.2e-110 400.6 244 82.8
Ciclev10026335m.g Citrus clementina HOM05D005962 ORTHO05D007325 1.2e-109 400.2 258 78.3
ECA248G1573 Erigeron canadensis HOM05D005962 ORTHO05D007325 1.6e-109 399.8 252 79.4
Gorai.002G261900 Gossypium raimondii HOM05D005962 ORTHO05D007325 1.6e-109 399.8 252 80.6
Hma1.2p1_2308F.1_g319480 Hydrangea macrophylla HOM05D005962 ORTHO05D007325 1.6e-109 399.8 260 78.5
Nitab4.5_0002423g0030 Nicotiana tabacum HOM05D005962 ORTHO05D007325 1.6e-109 399.8 257 79.4
TWI12G1051 Tripterygium wilfordii HOM05D005962 ORTHO05D007325 1.6e-109 399.8 260 78.8
Gohir.A10G063800 Gossypium hirsutum HOM05D005962 ORTHO05D007325 4.6e-109 398.3 258 77.1
Lsat_1_v5_gn_5_181040 Lactuca sativa HOM05D005962 ORTHO05D007325 4.6e-109 398.3 251 79.3
PGSC0003DMG400026839 Solanum tuberosum HOM05D005962 ORTHO05D007325 7.8e-109 397.5 258 77.9
ClCG07G013490 Citrullus lanatus HOM05D005962 ORTHO05D007325 1.7e-108 396.4 259 79.5
CsaV3_3G023410 Cucumis sativus L. HOM05D005962 ORTHO05D007325 3.9e-108 395.2 258 79.5
Dinv37956 Davidia involucrata HOM05D005962 ORTHO05D007325 5.1e-108 394.8 226 85.8
Lj3g0005277 Lotus japonicus HOM05D005962 ORTHO05D007325 8.6e-108 394.0 238 82.4
Sed0025844 Sechium edule HOM05D005962 ORTHO05D007325 8.6e-108 394.0 261 78.9
Gohir.D10G065400 Gossypium hirsutum HOM05D005962 ORTHO05D007325 1.1e-107 393.7 258 76.7
Medtr8g015230 Medicago truncatula HOM05D005962 ORTHO05D007325 1.1e-107 393.7 241 80.1
Duzib192G0276 Durio zibethinus HOM05D005962 ORTHO05D007325 5.6e-107 391.3 253 78.7
arahy.Tifrunner.gnm1.ann1.FEFU12 Arachis hypogaea HOM05D005962 ORTHO05D007325 7.3e-107 391.0 256 77.7
Sopen12g023060 Solanum pennellii HOM05D005962 ORTHO05D007325 2.1e-106 389.4 258 76.7
MSTRG.11013 Avicennia marina HOM05D005962 ORTHO05D007325 2.8e-106 389.0 264 75.0
Nitab4.5_0001172g0180 Nicotiana tabacum HOM05D005962 ORTHO05D007325 3.6e-106 388.7 258 76.7
Peaxi162Scf00038g01151 Petunia axillaris HOM05D005962 ORTHO05D007325 3.6e-106 388.7 258 76.7
Migut.I00971 Erythranthe guttata HOM05D005962 ORTHO05D007325 1.4e-105 386.7 264 75.4
Lalb_Chr01g0013231 Lupinus albus HOM05D005962 ORTHO05D007325 1.8e-105 386.3 258 76.0
PGSC0003DMG401002516 Solanum tuberosum HOM05D005962 ORTHO05D007325 1.8e-105 386.3 257 75.9
MELO3C013015.2 Cucumis melo HOM05D005962 ORTHO05D007325 3.1e-105 385.6 286 72.0
Gorai.011G069400 Gossypium raimondii HOM05D005962 ORTHO05D007325 4.0e-105 385.2 233 81.1
SalBow6G5073 Salvia bowleyana HOM05D005962 ORTHO05D007325 6.8e-105 384.4 229 82.5
CAN.G1143.30 Capsicum annuum HOM05D005962 ORTHO05D007325 2.0e-104 382.9 233 80.7
EL10Ac3g07358 Beta vulgaris HOM05D005962 ORTHO05D007325 3.4e-104 382.1 260 76.2
arahy.Tifrunner.gnm1.ann1.M52QXX Arachis hypogaea HOM05D005962 ORTHO05D007325 1.7e-103 379.8 230 80.9
Ca_23283_v3 Cicer arietinum L. HOM05D005962 ORTHO05D007325 3.7e-103 378.6 251 75.7
Eucgr.J02602 Eucalyptus grandis HOM05D005962 ORTHO05D007325 3.7e-103 378.6 265 74.7
HPP92_007682 Vanilla planifolia HOM05D005962 ORTHO05D007325 8.3e-103 377.5 258 73.6
AUR62020986 Chenopodium quinoa HOM05D005962 ORTHO05D007325 3.2e-102 375.6 260 75.0
Sopen03g040020 Solanum pennellii HOM05D005962 ORTHO05D007325 9.2e-102 374.0 258 74.4
HanXRQChr15g0489361 Helianthus annuus HOM05D005962 ORTHO05D007325 1.9e-99 366.3 254 73.6
PGR102G2175 Punica granatum HOM05D005962 ORTHO05D007325 3.3e-99 365.5 239 75.3
FvH4_6g32730 Fragaria vesca HOM05D005962 ORTHO05D007325 1.2e-98 363.6 246 73.6
RcHm_v2.0_Chr2g0141751 Rosa chinensis HOM05D005962 ORTHO05D007325 1.2e-98 363.6 246 73.2
unitig_32.g10986 Utricularia gibba HOM05D005962 ORTHO05D007325 6.2e-98 361.3 264 70.8
AUR62018448 Chenopodium quinoa HOM05D005962 ORTHO05D007325 1.8e-97 359.8 260 72.7
FAN05G1114 Fragaria x ananassa HOM05D005962 ORTHO05D007325 6.8e-97 357.8 246 72.4
FAN02G1749 Fragaria x ananassa HOM05D005962 ORTHO05D007325 2.6e-96 355.9 246 71.5
Os06g0217500 Oryza sativa ssp. japonica HOM05D005962 ORTHO05D007325 1.9e-94 349.7 258 68.6
FAN09G1055 Fragaria x ananassa HOM05D005962 ORTHO05D007325 5.4e-94 348.2 246 70.3
Aa31LG8G8050 Aethionema arabicum HOM05D005962 ORTHO05D007325 1.3e-92 343.6 257 70.0
Solyc03g121210.4 Solanum lycopersicum HOM05D005962 ORTHO05D007325 2.3e-92 342.8 220 78.2
Sp3g19410 Schrenkiella parvula HOM05D005962 ORTHO05D007325 1.5e-91 340.1 249 70.3
Zm00001eb372970 Zea mays HOM05D005962 ORTHO05D007325 1.5e-91 340.1 258 68.6
Carub.0003s2138 Capsella rubella HOM05D005962 ORTHO05D007325 2.5e-91 339.3 247 70.9
AL3G35400 Arabidopsis lyrata HOM05D005962 ORTHO05D007325 3.3e-91 339.0 250 70.4
SGA_v2.0_scaffold45G16998 Striga asiatica HOM05D005962 ORTHO05D007325 2.1e-90 336.3 209 79.4
SHI11207 Sapria himalayana HOM05D005962 ORTHO05D007325 2.8e-90 335.9 260 67.3
CARHR097270 Cardamine hirsuta HOM05D005962 ORTHO05D007325 4.7e-90 335.1 249 69.1
THA.LOC104805924 Tarenaya hassleriana HOM05D005962 ORTHO05D007325 1.4e-89 333.6 249 71.1
AT3G21350 Arabidopsis thaliana HOM05D005962 ORTHO05D007325 2.2e-87 326.2 247 69.6
Gohir.A01G226000 Gossypium hirsutum HOM05D005962 ORTHO05D007325 8.4e-87 324.3 198 82.3
BcaB06g26231 Brassica carinata HOM05D005962 ORTHO05D007325 1.4e-86 323.6 253 68.0
Thhalv10021373m.g Eutrema salsugineum HOM05D005962 ORTHO05D007325 1.6e-85 320.1 250 67.6
BcaC05g28175 Brassica carinata HOM05D005962 ORTHO05D007325 2.7e-85 319.3 257 65.4
C05p42110 Brassica napus HOM05D005962 ORTHO05D007325 6.0e-85 318.2 255 66.3
A05p27250 Brassica napus HOM05D005962 ORTHO05D007325 2.3e-84 316.2 255 66.3
BraA05t21615Z Brassica rapa HOM05D005962 ORTHO05D007325 9.6e-83 310.8 265 64.2
BolC5t32941H Brassica oleracea HOM05D005962 ORTHO05D007325 2.2e-79 299.7 292 57.9
ATR0705G221 Amborella trichopoda HOM05D005962 ORTHO05D007325 4.9e-79 298.5 167 85.6
TPR.G39766 Trifolium pratense HOM05D005962 ORTHO05D007325 1.0e-76 290.8 186 79.0
Cpa.g.sc131.1 Carica papaya HOM05D005962 ORTHO05D007325 1.8e-76 290.0 167 82.0
Ah.04g150140 Amaranthus hybridus HOM05D005962 ORTHO05D007325 1.4e-73 280.4 168 82.1
Migut.I00969 Erythranthe guttata HOM05D005962 ORTHO05D007325 4.0e-73 278.9 174 78.2
Migut.O00801 Erythranthe guttata HOM05D005962 ORTHO05D007325 5.3e-73 278.5 173 78.0
Cfa019373 Carpinus fangiana HOM05D005962 ORTHO05D007325 6.9e-73 278.1 172 82.6
Lj5A50T68 Lonicera japonica HOM05D005962 ORTHO05D007325 2.5e-70 269.6 172 80.8
Pp3c11_22580 Physcomitrium patens HOM05D005962 ORTHO05D007325 4.0e-65 252.3 246 56.5
MD14G1079700 Malus domestica HOM05D005962 ORTHO05D007325 6.9e-65 251.5 176 74.4
AagrBONN_evm.TU.Sc2ySwM_362.1658 Anthoceros agrestis HOM05D005962 ORTHO05D007325 3.4e-64 249.2 184 65.2
Mapoly0012s0176 Marchantia polymorpha HOM05D005962 ORTHO05D007325 3.5e-61 239.2 260 52.3
SMO143G0120 Selaginella moellendorffii HOM05D005962 ORTHO05D007325 2.2e-58 229.9 190 60.0
CBR_g22489 Chara braunii HOM05D005962 ORTHO05D007325 5.5e-46 188.7 242 48.3
Lj5C50T14 Lonicera japonica HOM05D005962 ORTHO05D007325 1.1e-38 164.5 88 83.0
Medtr0361s0030 Medicago truncatula HOM05D005962 ORTHO05D007325 1.9e-38 163.7 104 77.9
Dinv30416 Davidia involucrata HOM05D005962 ORTHO05D007325 7.2e-38 161.8 216 44.9
QL05p018100 Quercus lobata HOM05D005962 ORTHO05D007325 8.8e-36 154.8 94 81.9
Lj3g0016976 Lotus japonicus HOM05D005962 ORTHO05D007325 3.1e-33 146.4 192 51.0
TAR624G0741 Trochodendron aralioides HOM05D005962 ORTHO05D007325 1.2e-32 144.4 146 59.6
SEGI_18792 Sequoiadendron giganteum HOM05D005962 ORTHO05D007325 1.7e-31 140.6 80 81.2
Lsat_1_v5_gn_2_99820 Lactuca sativa HOM05D005962 ORTHO05D007325 2.0e-27 127.1 91 69.2
Cfa019374 Carpinus fangiana HOM05D005962 ORTHO05D007325 9.7e-27 124.8 71 80.3
RcHm_v2.0_Chr5g0064381 Rosa chinensis HOM05D005962 ORTHO05D007325 1.2e-24 117.9 92 62.0
Ah.04g150130 Amaranthus hybridus HOM05D000535 ORTHO05D000427 6.5e-23 112.1 91 67.0
TAR623G1541 Trochodendron aralioides HOM05D005962 ORTHO05D007325 8.5e-23 111.7 58 93.1
TAR636G3265 Trochodendron aralioides HOM05D005962 ORTHO05D007325 1.9e-22 110.5 60 85.0
Nitab4.5_0008212g0010 Nicotiana tabacum HOM05D005962 ORTHO05D007325 1.3e-18 97.8 197 38.6
PRCOL_00006676 Prasinoderma coloniale HOM05D001184 ORTHO05D008450 5.4e-17 92.4 148 37.2
Zm00001eb084330 Zea mays HOM05D005962 ORTHO05D007325 1.2e-16 91.3 59 72.9
Zm00001eb192830 Zea mays HOM05D005962 ORTHO05D007325 7.7e-16 88.6 58 70.7
Pp3c7_2870 Physcomitrium patens HOM05D005962 ORTHO05D007325 2.5e-14 83.6 233 34.3
GSVIVG01016925001 Vitis vinifera HOM05D000106 ORTHO05D000160 1.5e-11 74.3 52 67.3
BraA09t39590Z Brassica rapa HOM05D002393 ORTHO05D002845 2.6e-11 73.6 59 62.7
Cpa.g.c26718.1 Carica papaya HOM05D005962 ORTHO05D007325 4.4e-11 72.8 54 72.2
Dinv30417 Davidia involucrata HOM05D000106 ORTHO05D000160 2.2e-10 70.5 60 66.7


User provided reference genes

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