Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR622G1022 Trochodendron aralioides HOM05D003157 ORTHO05D004447 6.4e-96 354.0 168 100.0
TAR371G0612 Trochodendron aralioides HOM05D003157 ORTHO05D004447 8.8e-37 157.5 115 68.7
TAR629G0508 Trochodendron aralioides HOM05D003157 ORTHO05D004447 1.4e-34 150.2 115 66.1
Cfa019214 Carpinus fangiana HOM05D003157 ORTHO05D004447 5.5e-31 138.3 121 59.5
CSS0041144 Camellia sinensis var. sinensis HOM05D003157 ORTHO05D004447 6.1e-30 134.8 152 47.4
Nn3g16701 Nelumbo nucifera HOM05D003157 ORTHO05D004447 5.2e-29 131.7 115 58.3
Dinv20600 Davidia involucrata HOM05D003157 ORTHO05D004447 2.6e-28 129.4 153 48.4
Ciclev10024152m.g Citrus clementina HOM05D003157 ORTHO05D004447 7.5e-28 127.9 96 62.5
Haze_07584 Corylus avellana HOM05D003157 ORTHO05D004447 1.7e-27 126.7 154 47.4
Rhsim12G0167900 Rhododendron simsii HOM05D003157 ORTHO05D004447 1.7e-27 126.7 156 44.9
QL10p006899 Quercus lobata HOM05D003157 ORTHO05D004447 2.2e-27 126.3 134 52.2
Dinv38527 Davidia involucrata HOM05D003157 ORTHO05D004447 2.8e-27 125.9 121 53.7
Thecc.03G025700 Theobroma cacao HOM05D003157 ORTHO05D004447 2.8e-27 125.9 115 55.7
vmacro16645 Vaccinium macrocarpon HOM05D003157 ORTHO05D004447 3.7e-27 125.6 156 45.5
Manes.14G060700 Manihot esculenta HOM05D003157 ORTHO05D004447 2.4e-26 122.9 101 57.4
Lalb_Chr13g0297581 Lupinus albus HOM05D003157 ORTHO05D004447 3.1e-26 122.5 96 57.3
Prupe.5G165800 Prunus persica HOM05D003157 ORTHO05D004447 3.1e-26 122.5 134 50.0
Atru.chr9.2575 Acer truncatum HOM05D003157 ORTHO05D004447 9.1e-26 120.9 116 57.8
GSVIVG01007647001 Vitis vinifera HOM05D003157 ORTHO05D004447 9.1e-26 120.9 92 63.0
Manes.06G110100 Manihot esculenta HOM05D003157 ORTHO05D004447 2.0e-25 119.8 135 48.9
Rhsim08G0177500 Rhododendron simsii HOM05D003157 ORTHO05D004447 3.5e-25 119.0 137 46.7
Glyma.05G041600 Glycine max HOM05D003157 ORTHO05D004447 4.5e-25 118.6 96 57.3
vmacro19300 Vaccinium macrocarpon HOM05D003157 ORTHO05D004447 4.5e-25 118.6 104 56.7
Glyma.17G084700 Glycine max HOM05D003157 ORTHO05D004447 5.9e-25 118.2 94 57.4
Lalb_Chr07g0182971 Lupinus albus HOM05D003157 ORTHO05D004447 5.9e-25 118.2 100 52.0
Ca_14277_v3 Cicer arietinum L. HOM05D003157 ORTHO05D004447 7.7e-25 117.9 103 53.4
MD06G1165900 Malus domestica HOM05D003157 ORTHO05D004447 7.7e-25 117.9 94 62.8
TPR.G37494 Trifolium pratense HOM05D003157 ORTHO05D004447 7.7e-25 117.9 103 54.4
TWI14G1342 Tripterygium wilfordii HOM05D003157 ORTHO05D004447 1.7e-24 116.7 168 39.3
arahy.Tifrunner.gnm1.ann1.UDW2C6 Arachis hypogaea HOM05D003157 ORTHO05D004447 2.2e-24 116.3 96 56.2
Medtr4g104880 Medicago truncatula HOM05D003157 ORTHO05D004447 2.2e-24 116.3 97 56.7
Peaxi162Scf00089g01334 Petunia axillaris HOM05D003157 ORTHO05D004447 2.2e-24 116.3 157 45.2
Cc04_g11550 Coffea canephora HOM05D003157 ORTHO05D004447 5.0e-24 115.2 153 43.8
MD14G1171800 Malus domestica HOM05D003157 ORTHO05D004447 5.0e-24 115.2 97 58.8
Actinidia08960 Actinidia chinensis HOM05D003157 ORTHO05D004447 6.5e-24 114.8 96 57.3
arahy.Tifrunner.gnm1.ann1.RZMV9E Arachis hypogaea HOM05D003157 ORTHO05D004447 6.5e-24 114.8 96 55.2
Gohir.D03G106700 Gossypium hirsutum HOM05D003157 ORTHO05D004447 8.5e-24 114.4 105 50.5
Gorai.003G115800 Gossypium raimondii HOM05D003157 ORTHO05D004447 8.5e-24 114.4 105 51.4
Migut.D01995 Erythranthe guttata HOM05D003157 ORTHO05D004447 1.5e-23 113.6 153 43.1
MSTRG.9691 Avicennia marina HOM05D003157 ORTHO05D004447 1.9e-23 113.2 116 50.9
Oeu020884.3 Olea europaea HOM05D003157 ORTHO05D004447 1.9e-23 113.2 150 40.7
RcHm_v2.0_Chr7g0192591 Rosa chinensis HOM05D003157 ORTHO05D004447 1.9e-23 113.2 118 51.7
Gohir.A03G056900 Gossypium hirsutum HOM05D003157 ORTHO05D004447 2.5e-23 112.8 105 51.4
Nitab4.5_0010452g0010 Nicotiana tabacum HOM05D003157 ORTHO05D004447 2.5e-23 112.8 156 44.9
Lj5A130T68 Lonicera japonica HOM05D003157 ORTHO05D004447 4.2e-23 112.1 154 43.5
FAN13G0746 Fragaria x ananassa HOM05D003157 ORTHO05D004447 5.5e-23 111.7 117 51.3
FAN18G2672 Fragaria x ananassa HOM05D003157 ORTHO05D004447 7.2e-23 111.3 117 50.4
FAN04G1965 Fragaria x ananassa HOM05D003157 ORTHO05D004447 9.4e-23 110.9 149 43.6
VMungo1215G0567 Vigna mungo HOM05D003157 ORTHO05D004447 9.4e-23 110.9 96 54.2
FvH4_5g06270 Fragaria vesca HOM05D003157 ORTHO05D004447 1.2e-22 110.5 149 43.0
Phvul.003G205000 Phaseolus vulgaris HOM05D003157 ORTHO05D004447 1.2e-22 110.5 85 60.0
Nitab4.5_0001793g0010 Nicotiana tabacum HOM05D003157 ORTHO05D004447 1.6e-22 110.2 156 44.2
Sopen03g031330 Solanum pennellii HOM05D003157 ORTHO05D004447 1.6e-22 110.2 150 43.3
Gohir.D11G043500 Gossypium hirsutum HOM05D003157 ORTHO05D004447 2.1e-22 109.8 98 54.1
Gorai.007G046900 Gossypium raimondii HOM05D003157 ORTHO05D004447 2.1e-22 109.8 98 54.1
Lj9A442T64 Lonicera japonica HOM05D003157 ORTHO05D004447 2.7e-22 109.4 135 46.7
Gohir.A11G040300 Gossypium hirsutum HOM05D003157 ORTHO05D004447 3.6e-22 109.0 98 54.1
PSO111G0086 Papaver somniferum HOM05D003157 ORTHO05D004447 3.6e-22 109.0 110 53.6
PGSC0003DMG400018122 Solanum tuberosum HOM05D003157 ORTHO05D004447 3.6e-22 109.0 145 45.5
A08p21390 Brassica napus HOM05D003157 ORTHO05D004447 4.7e-22 108.6 120 45.8
BraA08t34089Z Brassica rapa HOM05D003157 ORTHO05D004447 4.7e-22 108.6 120 45.8
CAN.G338.32 Capsicum annuum HOM05D003157 ORTHO05D004447 4.7e-22 108.6 158 43.7
FAN08G1011 Fragaria x ananassa HOM05D003157 ORTHO05D004447 6.1e-22 108.2 149 43.0
Solyc03g112230.4 Solanum lycopersicum HOM05D003157 ORTHO05D004447 6.1e-22 108.2 150 42.7
Eucgr.K02800 Eucalyptus grandis HOM05D003157 ORTHO05D004447 1.0e-21 107.5 113 50.4
Nitab4.5_0000003g0820 Nicotiana tabacum HOM05D003157 ORTHO05D004447 1.4e-21 107.1 117 49.6
CANSAT80G2678 Cannabis sativa HOM05D003157 ORTHO05D004447 1.8e-21 106.7 100 51.0
Psat7g241120 Pisum sativum HOM05D002716 ORTHO05D003324 1.8e-21 106.7 96 55.2
COL.COLO4_36761 Corchorus olitorius HOM05D003157 ORTHO05D004447 2.3e-21 106.3 100 58.0
PSO754G0123 Papaver somniferum HOM05D003157 ORTHO05D004447 3.0e-21 105.9 140 45.7
Peaxi162Scf00763g00430 Petunia axillaris HOM05D003157 ORTHO05D004447 3.0e-21 105.9 160 42.5
BcaC07g38161 Brassica carinata HOM05D003157 ORTHO05D004447 5.2e-21 105.1 116 46.6
BolC8t48585H Brassica oleracea HOM05D003157 ORTHO05D004447 5.2e-21 105.1 116 46.6
Potri.012G085700 Populus trichocarpa HOM05D003157 ORTHO05D004447 5.2e-21 105.1 114 49.1
SalBow6G1229 Salvia bowleyana HOM05D003157 ORTHO05D004447 5.2e-21 105.1 94 56.4
HanXRQChr10g0296081 Helianthus annuus HOM05D003157 ORTHO05D004447 1.2e-20 104.0 81 63.0
Zm00001eb245950 Zea mays HOM05D003157 ORTHO05D004447 1.2e-20 104.0 103 48.5
Lj4g0014353 Lotus japonicus HOM05D003157 ORTHO05D004447 2.0e-20 103.2 94 50.0
BcaC09g50840 Brassica carinata HOM05D003157 ORTHO05D004447 3.4e-20 102.4 107 45.8
BraA01t01537Z Brassica rapa HOM05D003157 ORTHO05D004447 3.4e-20 102.4 85 54.1
BcaB03g12442 Brassica carinata HOM05D003157 ORTHO05D004447 4.4e-20 102.1 99 50.5
ECA232G3241 Erigeron canadensis HOM05D003157 ORTHO05D004447 4.4e-20 102.1 84 60.7
Os04g0476800 Oryza sativa ssp. japonica HOM05D003157 ORTHO05D004447 5.7e-20 101.7 133 40.6
PGSC0003DMG400027073 Solanum tuberosum HOM05D003157 ORTHO05D004447 5.7e-20 101.7 166 39.8
CARHR232070 Cardamine hirsuta HOM05D003157 ORTHO05D004447 7.5e-20 101.3 94 51.1
AL7G28510 Arabidopsis lyrata HOM05D003157 ORTHO05D004447 9.8e-20 100.9 147 42.9
CAN.G993.20 Capsicum annuum HOM05D003157 ORTHO05D004447 9.8e-20 100.9 133 42.9
Os02g0593700 Oryza sativa ssp. japonica HOM05D003157 ORTHO05D004447 9.8e-20 100.9 93 51.6
Potri.015G084000 Populus trichocarpa HOM05D003157 ORTHO05D004447 9.8e-20 100.9 111 47.7
C01p20020 Brassica napus HOM05D003157 ORTHO05D004447 1.3e-19 100.5 107 44.9
Psat4g060880 Pisum sativum HOM05D003157 ORTHO05D004447 1.3e-19 100.5 122 47.5
Aqoxy328s002 Aquilegia oxysepala HOM05D003157 ORTHO05D004447 1.7e-19 100.1 114 47.4
A01p16030 Brassica napus HOM05D003157 ORTHO05D004447 1.7e-19 100.1 83 56.6
Sabra15G0107200 Salix brachista HOM05D003157 ORTHO05D004447 1.7e-19 100.1 115 46.1
TWI23G0818 Tripterygium wilfordii HOM05D003157 ORTHO05D004447 1.7e-19 100.1 114 46.5
Lsat_1_v5_gn_4_77240 Lactuca sativa HOM05D003157 ORTHO05D004447 2.2e-19 99.8 84 59.5
MSTRG.11494 Avicennia marina HOM05D003157 ORTHO05D004447 3.7e-19 99.0 156 42.3
Carub.0007s1637 Capsella rubella HOM05D003157 ORTHO05D004447 3.7e-19 99.0 114 45.6
Nitab4.5_0008713g0020 Nicotiana tabacum HOM05D003157 ORTHO05D004447 3.7e-19 99.0 102 51.0
AT4G24690 Arabidopsis thaliana HOM05D003157 ORTHO05D004447 4.9e-19 98.6 146 41.1
EL10Ac5g10658 Beta vulgaris HOM05D003157 ORTHO05D004447 4.9e-19 98.6 122 43.4
DCAR_016024 Daucus carota HOM05D003157 ORTHO05D004447 4.9e-19 98.6 89 53.9
Lalb_Chr12g0201891 Lupinus albus HOM05D003157 ORTHO05D004447 4.9e-19 98.6 123 43.9
Sp7g22680 Schrenkiella parvula HOM05D003157 ORTHO05D004447 4.9e-19 98.6 85 52.9
THA.LOC104809775 Tarenaya hassleriana HOM05D003157 ORTHO05D004447 4.9e-19 98.6 86 53.5
unitig_37.g12746 Utricularia gibba HOM05D003157 ORTHO05D004447 4.9e-19 98.6 75 60.0
Aqoxy3G01217 Aquilegia oxysepala HOM05D003157 ORTHO05D004447 8.3e-19 97.8 114 46.5
DCAR_026172 Daucus carota HOM05D003157 ORTHO05D004447 1.1e-18 97.4 81 53.1
Sabra12G0061600 Salix brachista HOM05D003157 ORTHO05D004447 1.1e-18 97.4 96 51.0
HanXRQChr16g0504701 Helianthus annuus HOM05D003157 ORTHO05D004447 1.4e-18 97.1 84 56.0
Hund02785 Selenicereus undatus HOM05D003157 ORTHO05D004447 3.1e-18 95.9 101 51.5
DCAR_021588 Daucus carota HOM05D003157 ORTHO05D004447 4.1e-18 95.5 118 44.9
THA.LOC104825177 Tarenaya hassleriana HOM05D003157 ORTHO05D004447 5.4e-18 95.1 113 49.6
PGR044G1972 Punica granatum HOM05D003157 ORTHO05D004447 9.2e-18 94.4 87 52.9
BcaC06g32868 Brassica carinata HOM05D003157 ORTHO05D004447 1.2e-17 94.0 85 50.6
A03p55470 Brassica napus HOM05D003157 ORTHO05D004447 1.2e-17 94.0 85 50.6
C07p53750 Brassica napus HOM05D003157 ORTHO05D004447 2.0e-17 93.2 85 50.6
BolC7t45866H Brassica oleracea HOM05D003157 ORTHO05D004447 2.0e-17 93.2 85 50.6
Potri.012G085450 Populus trichocarpa HOM05D003157 ORTHO05D004447 2.7e-17 92.8 86 55.8
Sopen06g028060 Solanum pennellii HOM05D003157 ORTHO05D004447 4.5e-17 92.0 112 42.9
HPP92_006279 Vanilla planifolia HOM05D003157 ORTHO05D004447 1.0e-16 90.9 115 42.6
BraA03t14620Z Brassica rapa HOM05D003157 ORTHO05D004447 1.3e-16 90.5 85 48.2
Solyc06g071770.4 Solanum lycopersicum HOM05D003157 ORTHO05D004447 1.3e-16 90.5 112 42.0
SGA_v2.0_scaffold7G04161 Striga asiatica HOM05D003157 ORTHO05D004447 1.7e-16 90.1 96 47.9
Aa31LG4G9790 Aethionema arabicum HOM05D003157 ORTHO05D004447 3.8e-16 89.0 92 46.7
CiPaw.11G019800 Carya illinoinensis HOM05D003157 ORTHO05D004447 3.8e-16 89.0 104 47.1
AUR62028729 Chenopodium quinoa HOM05D003157 ORTHO05D004447 5.0e-16 88.6 107 45.8
HPP92_024706 Vanilla planifolia HOM05D003157 ORTHO05D004447 6.6e-16 88.2 101 47.5
AUR62008147 Chenopodium quinoa HOM05D003157 ORTHO05D004447 1.1e-15 87.4 107 44.9
BolC1t01929H Brassica oleracea HOM05D003157 ORTHO05D004447 1.5e-15 87.0 137 35.8
Ah.11g051160 Amaranthus hybridus HOM05D003157 ORTHO05D004447 5.6e-15 85.1 115 47.0
Cpa.g.sc159.27 Carica papaya HOM05D003157 ORTHO05D004447 7.3e-15 84.7 105 47.6
ClCG03G002990 Citrullus lanatus HOM05D003157 ORTHO05D004447 7.3e-15 84.7 80 50.0
SEGI_11452 Sequoiadendron giganteum HOM05D003157 ORTHO05D004447 7.3e-15 84.7 91 47.3
Sed0005003 Sechium edule HOM05D003157 ORTHO05D004447 9.5e-15 84.3 77 46.8
MELO3C002297.2 Cucumis melo HOM05D003157 ORTHO05D004447 1.2e-14 84.0 95 46.3
Sc12g0005010 Simmondsia chinensis HOM05D003157 ORTHO05D004447 1.6e-14 83.6 137 38.0
SGA_v2.0_scaffold114G31812 Striga asiatica HOM05D003157 ORTHO05D004447 1.6e-14 83.6 66 59.1
ClCG01G013500 Citrullus lanatus HOM05D003157 ORTHO05D004447 3.6e-14 82.4 77 50.6
Sed0026079 Sechium edule HOM05D003157 ORTHO05D004447 6.1e-14 81.6 124 35.5
CsaV3_1G008830 Cucumis sativus L. HOM05D003157 ORTHO05D004447 8.0e-14 81.3 92 47.8
Aqoxy3G02978 Aquilegia oxysepala HOM05D003157 ORTHO05D004447 4.4e-12 75.5 112 39.3
Thhalv10024557m.g Eutrema salsugineum HOM05D003157 ORTHO05D004447 4.4e-12 75.5 63 52.4
SHI17273 Sapria himalayana HOM05D003157 ORTHO05D004447 4.4e-12 75.5 63 52.4
CDE02G1794 Ceratophyllum demersum HOM05D003157 ORTHO05D004447 9.8e-12 74.3 77 49.4
Migut.O00156 Erythranthe guttata HOM05D003157 ORTHO05D004447 2.2e-11 73.2 122 32.0
CDE04G2303 Ceratophyllum demersum HOM05D003157 ORTHO05D004447 3.2e-10 69.3 86 43.0
Psat2g093280 Pisum sativum HOM05D002199 ORTHO05D007829 4.1e-10 68.9 41 73.2
Oeu023452.2 Olea europaea HOM05D003157 ORTHO05D004447 7.0e-10 68.2 102 44.1
COL.COLO4_24272 Corchorus olitorius HOM05D003157 ORTHO05D004447 2.0e-09 66.6 56 48.2
AagrBONN_evm.TU.Sc2ySwM_228.5109 Anthoceros agrestis HOM05D003157 ORTHO05D004447 5.9e-09 65.1 133 33.8
CBR_g19475 Chara braunii HOM05D003157 ORTHO05D004447 5.9e-09 65.1 53 49.1
Migut.K00603 Erythranthe guttata HOM05D003157 ORTHO05D004447 7.8e-09 64.7 63 49.2
PSO017G1918 Papaver somniferum HOM05D003157 ORTHO05D004447 1.0e-08 64.3 66 50.0
ATR0824G119 Amborella trichopoda HOM05D003157 ORTHO05D004447 3.0e-08 62.8 96 34.4
Migut.O00157 Erythranthe guttata HOM05D003157 ORTHO05D004447 3.0e-08 62.8 61 47.5
Pp3c11_16970 Physcomitrium patens HOM05D003157 ORTHO05D004447 8.6e-08 61.2 94 30.9
Mapoly0100s0042 Marchantia polymorpha HOM05D003157 ORTHO05D004447 1.5e-07 60.5 45 53.3
Dinv15230 Davidia involucrata HOM05D003157 ORTHO05D004447 2.5e-07 59.7 117 38.5
Pp3c7_8990 Physcomitrium patens HOM05D003157 ORTHO05D004447 2.5e-07 59.7 94 36.2
SMO132G0003 Selaginella moellendorffii HOM05D003157 ORTHO05D004447 6.2e-06 55.1 85 37.6
THA.LOC104815519 Tarenaya hassleriana HOM05D003157 ORTHO05D004447 8.0e-06 54.7 44 59.1


User provided reference genes

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