Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR622G0958 Trochodendron aralioides HOM05D005168 ORTHO05D006358 2.4e-71 271.9 126 100.0
Nn3g19859 Nelumbo nucifera HOM05D005168 ORTHO05D006358 8.9e-58 226.9 126 82.5
CDE11G0347 Ceratophyllum demersum HOM05D005168 ORTHO05D006358 5.0e-53 211.1 125 76.8
PSO541G4324 Papaver somniferum HOM05D005168 ORTHO05D006358 4.0e-50 201.4 126 72.2
PSO675G5410 Papaver somniferum HOM05D005168 ORTHO05D006358 4.0e-50 201.4 126 72.2
GSVIVG01009945001 Vitis vinifera HOM05D005168 ORTHO05D006358 2.0e-41 172.6 127 64.6
Sc15g0004820 Simmondsia chinensis HOM05D005168 ORTHO05D006358 4.9e-40 167.9 127 59.1
SEGI_04309 Sequoiadendron giganteum HOM05D005168 ORTHO05D006358 1.4e-39 166.4 128 57.8
Os03g0711700 Oryza sativa ssp. japonica HOM05D005168 ORTHO05D006358 2.4e-39 165.6 125 59.2
EL10Ac1g02165 Beta vulgaris HOM05D005168 ORTHO05D006358 2.1e-38 162.5 127 57.5
TWI56G1449 Tripterygium wilfordii HOM05D005168 ORTHO05D006358 1.9e-36 156.0 124 58.1
Hund09202 Selenicereus undatus HOM05D005168 ORTHO05D006358 2.8e-35 152.1 127 53.5
Hma1.2p1_0733F.1_g210170 Hydrangea macrophylla HOM05D005168 ORTHO05D006358 1.1e-34 150.2 126 58.7
ATR0057G015 Amborella trichopoda HOM05D005168 ORTHO05D006358 8.9e-34 147.1 91 72.5
Psat5g045240 Pisum sativum HOM05D005168 ORTHO05D006358 3.4e-33 145.2 124 51.6
Mapoly0043s0107 Marchantia polymorpha HOM05D005168 ORTHO05D006358 5.8e-33 144.4 124 55.6
Ca_00384_v3 Cicer arietinum L. HOM05D005168 ORTHO05D006358 7.6e-33 144.1 124 51.6
QL01p031168 Quercus lobata HOM05D005168 ORTHO05D006358 9.9e-33 143.7 124 54.0
CSS0038486 Camellia sinensis var. sinensis HOM05D005168 ORTHO05D006358 1.3e-32 143.3 126 52.4
AagrBONN_evm.TU.Sc2ySwM_368.3393 Anthoceros agrestis HOM05D005168 ORTHO05D006358 2.9e-32 142.1 121 55.4
CiPaw.07G147200 Carya illinoinensis HOM05D005168 ORTHO05D006358 4.9e-32 141.4 124 55.6
CSS0004439 Camellia sinensis var. sinensis HOM05D005168 ORTHO05D006358 6.4e-32 141.0 126 50.8
MD08G1010500 Malus domestica HOM05D005168 ORTHO05D006358 8.4e-32 140.6 128 53.9
PGR031G0142 Punica granatum HOM05D005168 ORTHO05D006358 8.4e-32 140.6 124 54.0
CANSAT11G0916 Cannabis sativa HOM05D005168 ORTHO05D006358 4.1e-31 138.3 124 50.8
Prupe.6G147400 Prunus persica HOM05D005168 ORTHO05D006358 4.1e-31 138.3 128 52.3
Thecc.08G047200 Theobroma cacao HOM05D005168 ORTHO05D006358 4.1e-31 138.3 124 54.0
Aqoxy2G01931 Aquilegia oxysepala HOM05D005168 ORTHO05D006358 5.4e-31 137.9 124 54.0
Actinidia37940 Actinidia chinensis HOM05D005168 ORTHO05D006358 1.2e-30 136.7 126 50.8
Medtr3g102420 Medicago truncatula HOM05D005168 ORTHO05D006358 2.1e-30 136.0 122 50.8
SGA_v2.0_scaffold47G17500 Striga asiatica HOM05D005168 ORTHO05D006358 2.1e-30 136.0 126 48.4
CDE09G0329 Ceratophyllum demersum HOM05D005168 ORTHO05D006358 2.7e-30 135.6 78 80.8
Eucgr.C01258 Eucalyptus grandis HOM05D005168 ORTHO05D006358 4.6e-30 134.8 124 51.6
Aa31LG4G6030 Aethionema arabicum HOM05D005168 ORTHO05D006358 7.8e-30 134.0 122 52.5
Lj1g0018211 Lotus japonicus HOM05D005168 ORTHO05D006358 1.0e-29 133.7 124 48.4
Lalb_Chr11g0067001 Lupinus albus HOM05D005168 ORTHO05D006358 1.0e-29 133.7 122 50.8
SGA_v2.0_scaffold19G08553 Striga asiatica HOM05D005168 ORTHO05D006358 1.0e-29 133.7 126 47.6
Haze_22662 Corylus avellana HOM05D005168 ORTHO05D006358 1.7e-29 132.9 124 50.0
Nitab4.5_0000337g0010 Nicotiana tabacum HOM05D005168 ORTHO05D006358 1.7e-29 132.9 126 50.0
Nitab4.5_0003251g0060 Nicotiana tabacum HOM05D005168 ORTHO05D006358 1.7e-29 132.9 126 50.0
AL5G14600 Arabidopsis lyrata HOM05D005168 ORTHO05D006358 2.3e-29 132.5 122 50.8
Thhalv10019327m.g Eutrema salsugineum HOM05D005168 ORTHO05D006358 3.0e-29 132.1 122 50.8
Solyc04g054510.4 Solanum lycopersicum HOM05D005168 ORTHO05D006358 3.0e-29 132.1 126 50.0
PGSC0003DMG400022038 Solanum tuberosum HOM05D005168 ORTHO05D006358 3.0e-29 132.1 126 50.0
AT3G25940 Arabidopsis thaliana HOM05D005168 ORTHO05D006358 3.9e-29 131.7 122 50.0
BcaB03g14336 Brassica carinata HOM05D005168 ORTHO05D006358 5.1e-29 131.3 122 50.0
BcaB03g14344 Brassica carinata HOM05D005168 ORTHO05D006358 5.1e-29 131.3 122 50.0
A07p16030 Brassica napus HOM05D005168 ORTHO05D006358 5.1e-29 131.3 122 50.0
C07p23400 Brassica napus HOM05D005168 ORTHO05D006358 5.1e-29 131.3 122 50.0
BolC7t42872H Brassica oleracea HOM05D005168 ORTHO05D006358 5.1e-29 131.3 122 50.0
BraA07t29331Z Brassica rapa HOM05D005168 ORTHO05D006358 5.1e-29 131.3 122 50.0
Eucgr.H00960 Eucalyptus grandis HOM05D005168 ORTHO05D006358 5.1e-29 131.3 124 50.0
SalBow8G1113 Salvia bowleyana HOM05D005168 ORTHO05D006358 5.1e-29 131.3 124 46.0
Haze_17776 Corylus avellana HOM05D005168 ORTHO05D006358 6.6e-29 131.0 124 49.2
CAN.G727.4 Capsicum annuum HOM05D005168 ORTHO05D006358 1.1e-28 130.2 126 50.0
Cfa012889 Carpinus fangiana HOM05D005168 ORTHO05D006358 1.1e-28 130.2 124 49.2
Thhalv10009132m.g Eutrema salsugineum HOM05D005168 ORTHO05D006358 1.1e-28 130.2 122 50.0
Manes.14G063600 Manihot esculenta HOM05D005168 ORTHO05D006358 1.1e-28 130.2 124 49.2
vmacro04368 Vaccinium macrocarpon HOM05D005168 ORTHO05D006358 1.1e-28 130.2 125 52.0
Zm00001eb054840 Zea mays HOM05D005168 ORTHO05D006358 1.5e-28 129.8 121 50.4
BcaB07g32021 Brassica carinata HOM05D005168 ORTHO05D006358 1.9e-28 129.4 122 48.4
CARHR020540 Cardamine hirsuta HOM05D005168 ORTHO05D006358 1.9e-28 129.4 122 50.0
HPP92_028162 Vanilla planifolia HOM05D005168 ORTHO05D006358 1.9e-28 129.4 87 69.0
Cpa.g.sc58.102 Carica papaya HOM05D005168 ORTHO05D006358 2.5e-28 129.0 122 50.8
Duzib093G1099 Durio zibethinus HOM05D005168 ORTHO05D006358 2.5e-28 129.0 125 53.6
Peaxi162Scf00553g00216 Petunia axillaris HOM05D005168 ORTHO05D006358 2.5e-28 129.0 126 48.4
Sp1g17830 Schrenkiella parvula HOM05D005168 ORTHO05D006358 2.5e-28 129.0 122 49.2
CARHR146930 Cardamine hirsuta HOM05D005168 ORTHO05D006358 3.3e-28 128.6 122 50.0
Gohir.A06G002600 Gossypium hirsutum HOM05D005168 ORTHO05D006358 4.3e-28 128.3 124 51.6
Gohir.D06G005600 Gossypium hirsutum HOM05D005168 ORTHO05D006358 4.3e-28 128.3 124 51.6
Gorai.010G002800 Gossypium raimondii HOM05D005168 ORTHO05D006358 4.3e-28 128.3 124 51.6
THA.LOC104825467 Tarenaya hassleriana HOM05D005168 ORTHO05D006358 5.6e-28 127.9 118 51.7
THA.LOC104825468 Tarenaya hassleriana HOM05D005168 ORTHO05D006358 5.6e-28 127.9 118 52.5
MSTRG.22344 Avicennia marina HOM05D005168 ORTHO05D006358 7.3e-28 127.5 124 46.0
Cc10_g01450 Coffea canephora HOM05D005168 ORTHO05D006358 7.3e-28 127.5 123 47.2
DCAR_015742 Daucus carota HOM05D005168 ORTHO05D006358 7.3e-28 127.5 128 49.2
BraA06t24725Z Brassica rapa HOM05D005168 ORTHO05D006358 9.6e-28 127.1 122 47.5
Atru.chr1.3654 Acer truncatum HOM05D005168 ORTHO05D006358 1.2e-27 126.7 120 50.0
BcaC05g25900 Brassica carinata HOM05D005168 ORTHO05D006358 1.2e-27 126.7 122 47.5
C05p18550 Brassica napus HOM05D005168 ORTHO05D006358 1.2e-27 126.7 122 47.5
BolC5t30566H Brassica oleracea HOM05D005168 ORTHO05D006358 1.2e-27 126.7 122 47.5
MELO3C011355.2 Cucumis melo HOM05D005168 ORTHO05D006358 1.2e-27 126.7 124 50.0
CsaV3_2G024260 Cucumis sativus L. HOM05D005168 ORTHO05D006358 1.2e-27 126.7 124 49.2
arahy.Tifrunner.gnm1.ann1.TKX6L5 Arachis hypogaea HOM05D005168 ORTHO05D006358 1.6e-27 126.3 126 48.4
A06p16200 Brassica napus HOM05D005168 ORTHO05D006358 1.6e-27 126.3 122 47.5
THA.LOC104811420 Tarenaya hassleriana HOM05D005168 ORTHO05D006358 2.8e-27 125.6 118 51.7
Carub.0005s0380 Capsella rubella HOM05D005168 ORTHO05D006358 4.7e-27 124.8 114 50.0
arahy.Tifrunner.gnm1.ann1.GU7A1M Arachis hypogaea HOM05D005168 ORTHO05D006358 6.2e-27 124.4 126 47.6
Potri.013G015000 Populus trichocarpa HOM05D005168 ORTHO05D006358 1.4e-26 123.2 124 44.4
Sed0007604 Sechium edule HOM05D005168 ORTHO05D006358 2.4e-26 122.5 124 46.8
Pp3c24_7070 Physcomitrium patens HOM05D005168 ORTHO05D006358 4.0e-26 121.7 154 40.9
Ciclev10003775m.g Citrus clementina HOM05D005168 ORTHO05D006358 8.9e-26 120.6 120 48.3
Glyma.03G178900 Glycine max HOM05D005168 ORTHO05D006358 3.4e-25 118.6 117 43.6
Lsat_1_v5_gn_2_14120 Lactuca sativa HOM05D005168 ORTHO05D006358 7.6e-25 117.5 119 46.2
Rhsim07G0250400 Rhododendron simsii HOM05D005168 ORTHO05D006358 7.6e-25 117.5 126 44.4
Cre01.g018000 Chlamydomonas reinhardtii HOM05D005168 ORTHO05D006358 3.8e-24 115.2 124 47.6
Phvul.001G175600 Phaseolus vulgaris HOM05D005168 ORTHO05D006358 3.8e-24 115.2 117 44.4
VMungo1080G1160 Vigna mungo HOM05D005168 ORTHO05D006358 4.9e-24 114.8 124 42.7
ECA238G1857 Erigeron canadensis HOM05D005168 ORTHO05D006358 8.4e-24 114.0 119 43.7
Migut.N03173 Erythranthe guttata HOM05D005168 ORTHO05D006358 1.1e-23 113.6 124 40.3
unitig_22.g6797 Utricularia gibba HOM05D005168 ORTHO05D006358 7.1e-23 110.9 124 39.5
SMO351G0141 Selaginella moellendorffii HOM05D005168 ORTHO05D006358 1.6e-22 109.8 116 46.6
HanXRQChr04g0101211 Helianthus annuus HOM05D005168 ORTHO05D006358 6.0e-22 107.8 119 42.0
Sopen04g024330 Solanum pennellii HOM05D005168 ORTHO05D006358 1.0e-21 107.1 113 46.9
Dinv40488 Davidia involucrata HOM05D005168 ORTHO05D006358 1.5e-20 103.2 110 47.3
FAN23G3095 Fragaria x ananassa HOM05D005168 ORTHO05D006358 1.9e-20 102.8 121 42.1
FvH4_1g24780 Fragaria vesca HOM05D005168 ORTHO05D006358 5.6e-20 101.3 121 41.3
Sabra13G0016900 Salix brachista HOM05D005168 ORTHO05D006358 5.3e-18 94.7 103 41.7
Sabra13G0012900 Salix brachista HOM05D005168 ORTHO05D006358 2.6e-17 92.4 101 41.6
RcHm_v2.0_Chr2g0124111 Rosa chinensis HOM05D005168 ORTHO05D006358 9.9e-17 90.5 121 38.0
CBR_g23850 Chara braunii HOM05D005168 ORTHO05D006358 2.9e-16 89.0 95 48.4
Eucgr.L01842 Eucalyptus grandis HOM05D005168 ORTHO05D006358 3.8e-16 88.6 82 53.7
MCO15G369 Micromonas commoda HOM05D005168 ORTHO05D006358 1.9e-15 86.3 134 41.0
MD15G1010600 Malus domestica HOM05D005168 ORTHO05D006358 1.6e-14 83.2 54 68.5
Aqoxy6G02286 Aquilegia oxysepala HOM05D005168 ORTHO05D006358 6.0e-14 81.3 118 39.0
AUR62041475 Chenopodium quinoa HOM05D005168 ORTHO05D006358 3.0e-13 79.0 74 47.3
AT1G20065 Arabidopsis thaliana HOM05D005168 ORTHO05D006358 6.6e-13 77.8 61 60.7
Ca_15982_v3 Cicer arietinum L. HOM05D005168 ORTHO05D006358 8.7e-13 77.4 53 56.6
Ah.01g021000 Amaranthus hybridus HOM05D005168 ORTHO05D006358 1.5e-12 76.6 67 50.7
AL1G32870 Arabidopsis lyrata HOM05D005168 ORTHO05D006358 1.5e-12 76.6 64 56.2
TPR.G9182 Trifolium pratense HOM05D005168 ORTHO05D006358 7.4e-12 74.3 84 41.7
AUR62040557 Chenopodium quinoa HOM05D005168 ORTHO05D006358 1.6e-11 73.2 67 46.3
Eucgr.F02832 Eucalyptus grandis HOM05D005168 ORTHO05D006358 2.8e-11 72.4 86 40.7
BcaC05g25904 Brassica carinata HOM05D005168 ORTHO05D006358 8.1e-11 70.9 95 38.9
Glyma.19G179600 Glycine max HOM05D005168 ORTHO05D006358 6.9e-10 67.8 55 49.1
SEGI_40975 Sequoiadendron giganteum HOM05D005168 ORTHO05D006358 1.5e-09 66.6 60 48.3
THA.LOC109116732 Tarenaya hassleriana HOM05D005168 ORTHO05D006358 2.0e-09 66.2 45 64.4
ClCG08G014170 Citrullus lanatus HOM05D005168 ORTHO05D006358 2.6e-09 65.9 40 67.5
Medtr7g116750 Medicago truncatula HOM05D006029 ORTHO05D007439 3.4e-09 65.5 127 31.5
Medtr5g030180 Medicago truncatula HOM05D006029 ORTHO05D007439 6.4e-08 61.2 126 31.0
FAN26G0870 Fragaria x ananassa HOM05D005168 ORTHO05D006358 2.4e-07 59.3 75 38.7
Lj4A21T59 Lonicera japonica HOM05D005168 ORTHO05D006358 9.3e-07 57.4 79 38.0
Aa31LG1G10580 Aethionema arabicum HOM05D006029 ORTHO05D007439 1.2e-06 57.0 99 32.3
MSTRG.17362 Avicennia marina HOM05D006029 ORTHO05D007439 1.2e-06 57.0 122 32.0
Glyma.08G246200 Glycine max HOM05D005168 ORTHO05D006358 1.6e-06 56.6 49 44.9
Migut.B01899 Erythranthe guttata HOM05D006029 ORTHO05D007439 2.7e-06 55.8 124 28.2
Glyma.17G201200 Glycine max HOM05D005168 ORTHO05D006358 2.7e-06 55.8 71 39.4
BolC8t52870H Brassica oleracea HOM05D006029 ORTHO05D007439 3.5e-06 55.5 108 31.5
AL1G11270 Arabidopsis lyrata HOM05D006029 ORTHO05D007439 7.9e-06 54.3 109 30.3
AT4G07950 Arabidopsis thaliana HOM05D006029 ORTHO05D007439 7.9e-06 54.3 110 30.0
Glyma.06G213500 Glycine max HOM05D005168 ORTHO05D006358 7.9e-06 54.3 71 38.0
SGA_v2.0_scaffold22G09953 Striga asiatica HOM05D006029 ORTHO05D007439 7.9e-06 54.3 119 31.1


User provided reference genes

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