Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR376G0961 Trochodendron aralioides HOM05D004674 ORTHO05D007261 0.0e+00 1151.3 589 100.0
TAR376G0038 Trochodendron aralioides HOM05D004674 ORTHO05D007261 8.9e-278 959.9 538 92.2
TAR376G0875 Trochodendron aralioides HOM05D004674 ORTHO05D007261 1.6e-271 939.1 518 93.4
TAR376G0765 Trochodendron aralioides HOM05D004674 ORTHO05D007261 7.7e-213 744.2 436 89.2
Nn5g29687 Nelumbo nucifera HOM05D004674 ORTHO05D007261 3.0e-209 732.3 480 78.1
QL06p035418 Quercus lobata HOM05D004674 ORTHO05D007261 8.8e-209 730.7 518 73.6
GSVIVG01018892001 Vitis vinifera HOM05D004674 ORTHO05D007261 9.8e-208 727.2 516 72.5
QL06p035429 Quercus lobata HOM05D004674 ORTHO05D007261 1.4e-206 723.4 518 73.0
Thecc.01G030000 Theobroma cacao HOM05D004674 ORTHO05D007261 2.4e-206 722.6 516 73.3
Haze_03856 Corylus avellana HOM05D004674 ORTHO05D007261 5.4e-206 721.5 516 72.7
Duzib264G1222 Durio zibethinus HOM05D004674 ORTHO05D007261 9.1e-206 720.7 516 72.9
CSS0017426 Camellia sinensis var. sinensis HOM05D004674 ORTHO05D007261 1.7e-204 716.5 517 72.7
Cfa006896 Carpinus fangiana HOM05D004674 ORTHO05D007261 1.7e-204 716.5 516 72.7
Ciclev10024970m.g Citrus clementina HOM05D004674 ORTHO05D007261 2.1e-202 709.5 519 73.6
Gorai.007G201200 Gossypium raimondii HOM05D004674 ORTHO05D007261 6.1e-202 708.0 516 71.1
CiPaw.07G049300 Carya illinoinensis HOM05D004674 ORTHO05D007261 8.0e-202 707.6 518 71.4
Aqoxy5G01578 Aquilegia oxysepala HOM05D004674 ORTHO05D007261 4.0e-201 705.3 517 72.0
CANSAT01G1299 Cannabis sativa HOM05D004674 ORTHO05D007261 4.0e-201 705.3 517 71.6
VMungo0251G2099 Vigna mungo HOM05D004674 ORTHO05D007261 5.2e-201 704.9 516 72.3
Gohir.D11G189100 Gossypium hirsutum HOM05D004674 ORTHO05D007261 2.0e-200 703.0 524 70.2
Potri.007G021000 Populus trichocarpa HOM05D004674 ORTHO05D007261 3.4e-200 702.2 516 71.5
Cpa.g.sc6.166 Carica papaya HOM05D004674 ORTHO05D007261 9.8e-200 700.7 518 71.0
Sabra07G0018000 Salix brachista HOM05D004674 ORTHO05D007261 1.7e-199 699.9 522 70.1
COL.COLO4_22030 Corchorus olitorius HOM05D004674 ORTHO05D007261 8.3e-199 697.6 521 69.5
Prupe.7G158600 Prunus persica HOM05D004674 ORTHO05D007261 1.8e-198 696.4 519 70.9
Gohir.A11G182300 Gossypium hirsutum HOM05D004674 ORTHO05D007261 4.1e-198 695.3 516 70.3
Atru.chr3.699 Acer truncatum HOM05D004674 ORTHO05D007261 5.4e-198 694.9 501 71.7
Lj4A206G17 Lonicera japonica HOM05D004674 ORTHO05D007261 3.5e-197 692.2 518 71.4
TWI09G0339 Tripterygium wilfordii HOM05D004674 ORTHO05D007261 1.3e-196 690.3 517 70.2
Ca_22335_v3 Cicer arietinum L. HOM05D004674 ORTHO05D007261 3.8e-196 688.7 516 69.2
Oeu019445.1 Olea europaea HOM05D004674 ORTHO05D007261 1.5e-195 686.8 539 68.3
Eucgr.I02404 Eucalyptus grandis HOM05D004674 ORTHO05D007261 2.8e-194 682.6 516 68.6
Glyma.02G053800 Glycine max HOM05D004674 ORTHO05D007261 3.6e-194 682.2 516 69.8
Medtr8g076950 Medicago truncatula HOM05D004674 ORTHO05D007261 4.7e-194 681.8 516 68.0
ClCG01G019830 Citrullus lanatus HOM05D004674 ORTHO05D007261 1.0e-193 680.6 522 68.0
Lalb_Chr16g0391041 Lupinus albus HOM05D004674 ORTHO05D007261 4.0e-193 678.7 522 69.3
DCAR_017308 Daucus carota HOM05D004674 ORTHO05D007261 2.0e-192 676.4 517 70.0
TPR.G21548 Trifolium pratense HOM05D004674 ORTHO05D007261 2.0e-192 676.4 516 68.0
AUR62007603 Chenopodium quinoa HOM05D004674 ORTHO05D007261 4.4e-192 675.2 516 68.8
Hund16446 Selenicereus undatus HOM05D004674 ORTHO05D007261 4.4e-192 675.2 521 68.7
PGSC0003DMG400015491 Solanum tuberosum HOM05D004674 ORTHO05D007261 1.7e-191 673.3 522 69.2
ECA232G2544 Erigeron canadensis HOM05D004674 ORTHO05D000001 2.9e-191 672.5 516 69.8
CsaV3_6G046560 Cucumis sativus L. HOM05D004674 ORTHO05D007261 3.7e-191 672.2 517 68.7
AUR62004091 Chenopodium quinoa HOM05D004674 ORTHO05D007261 4.9e-191 671.8 516 68.2
THA.LOC104821303 Tarenaya hassleriana HOM05D004674 ORTHO05D007261 8.3e-191 671.0 519 68.0
Cc07_g09910 Coffea canephora HOM05D004674 ORTHO05D007261 1.4e-190 670.2 516 68.4
Rhsim08G0121400 Rhododendron simsii HOM05D004674 ORTHO05D007261 3.2e-190 669.1 520 69.4
MSTRG.2485 Avicennia marina HOM05D004674 ORTHO05D007261 4.1e-190 668.7 514 67.5
EL10As8g23909 Beta vulgaris HOM05D004674 ORTHO05D007261 1.6e-189 666.8 516 68.6
Lj4g0022194 Lotus japonicus HOM05D004674 ORTHO05D007261 2.7e-189 666.0 521 68.7
MD15G1256300 Malus domestica HOM05D004674 ORTHO05D007261 3.5e-189 665.6 500 71.2
SGA_v2.0_scaffold12G06320 Striga asiatica HOM05D004674 ORTHO05D007261 3.5e-189 665.6 516 68.4
RcHm_v2.0_Chr2g0100861 Rosa chinensis HOM05D004674 ORTHO05D007261 7.8e-189 664.5 519 68.8
Migut.H02523 Erythranthe guttata HOM05D004674 ORTHO05D007261 1.3e-188 663.7 530 67.7
PSO170G5809 Papaver somniferum HOM05D004674 ORTHO05D007261 2.3e-188 662.9 518 67.6
Sed0001139 Sechium edule HOM05D004674 ORTHO05D007261 3.0e-188 662.5 517 69.2
Sopen02g013570 Solanum pennellii HOM05D004674 ORTHO05D007261 3.0e-188 662.5 522 68.4
SalBow8G5199 Salvia bowleyana HOM05D004674 ORTHO05D007261 3.9e-188 662.1 526 67.3
arahy.Tifrunner.gnm1.ann1.SG067W Arachis hypogaea HOM05D004674 ORTHO05D007261 1.1e-187 660.6 520 68.5
SalBow8G1271 Salvia bowleyana HOM05D004674 ORTHO05D007261 2.5e-187 659.4 514 68.5
HanXRQChr09g0261191 Helianthus annuus HOM05D004674 ORTHO05D007261 4.3e-187 658.7 517 68.3
Nitab4.5_0000136g0250 Nicotiana tabacum HOM05D004674 ORTHO05D007261 5.6e-187 658.3 517 68.3
AT5G66420 Arabidopsis thaliana HOM05D004674 ORTHO05D007261 7.3e-187 657.9 519 67.1
arahy.Tifrunner.gnm1.ann1.LKR1Y0 Arachis hypogaea HOM05D004674 ORTHO05D007261 9.5e-187 657.5 520 68.3
Solyc02g062560.3 Solanum lycopersicum HOM05D004674 ORTHO05D007261 9.5e-187 657.5 532 68.0
FAN26G2871 Fragaria x ananassa HOM05D004674 ORTHO05D007261 1.8e-185 653.3 521 68.9
Sc16g0002550 Simmondsia chinensis HOM05D004674 ORTHO05D007261 1.8e-185 653.3 516 67.8
Lsat_1_v5_gn_4_148020 Lactuca sativa HOM05D004674 ORTHO05D007261 3.1e-185 652.5 516 67.2
Peaxi162Scf00008g03325 Petunia axillaris HOM05D004674 ORTHO05D007261 3.1e-185 652.5 517 68.5
HPP92_004908 Vanilla planifolia HOM05D004674 ORTHO05D007261 6.8e-185 651.4 542 64.9
AL8G45110 Arabidopsis lyrata HOM05D004674 ORTHO05D007261 2.0e-184 649.8 519 66.5
CARHR034750 Cardamine hirsuta HOM05D004674 ORTHO05D007261 4.4e-184 648.7 521 66.4
CAN.G1019.6 Capsicum annuum HOM05D004674 ORTHO05D007261 9.8e-184 647.5 522 66.7
Nitab4.5_0001525g0030 Nicotiana tabacum HOM05D004674 ORTHO05D007261 9.8e-184 647.5 515 68.3
FAN23G0750 Fragaria x ananassa HOM05D004674 ORTHO05D007261 1.7e-183 646.7 521 68.1
Carub.0008s2809 Capsella rubella HOM05D004674 ORTHO05D007261 1.9e-182 643.3 524 66.4
Phvul.003G256400 Phaseolus vulgaris HOM05D004674 ORTHO05D007261 9.2e-182 641.0 462 73.6
PGR119G1113 Punica granatum HOM05D004674 ORTHO05D007261 9.2e-182 641.0 516 66.7
Thhalv10003695m.g Eutrema salsugineum HOM05D004674 ORTHO05D007261 3.5e-181 639.0 520 66.3
Psat4g095640 Pisum sativum HOM05D004674 ORTHO05D007261 6.6e-180 634.8 524 64.7
Os06g0472400 Oryza sativa ssp. japonica HOM05D004674 ORTHO05D007261 8.6e-180 634.4 526 64.8
Zm00001eb225760 Zea mays HOM05D004674 ORTHO05D007261 5.6e-179 631.7 537 62.6
FAN28G0143 Fragaria x ananassa HOM05D004674 ORTHO05D007261 8.1e-178 627.9 515 66.8
ATR0568G133 Amborella trichopoda HOM05D004674 ORTHO05D007261 1.2e-176 624.0 515 64.3
A07p17540 Brassica napus HOM05D004674 ORTHO05D007261 2.6e-176 622.9 518 65.8
BcaB02g10033 Brassica carinata HOM05D004674 ORTHO05D007261 3.4e-176 622.5 520 64.8
BraA07t29474Z Brassica rapa HOM05D004674 ORTHO05D007261 2.2e-175 619.8 518 65.6
C07p25500 Brassica napus HOM05D004674 ORTHO05D007261 1.1e-171 607.4 520 64.2
BolC7t43070H Brassica oleracea HOM05D004674 ORTHO05D007261 7.3e-171 604.7 520 64.4
BcaC06g34697 Brassica carinata HOM05D004674 ORTHO05D007261 2.8e-170 602.8 520 64.0
FAN19G2260 Fragaria x ananassa HOM05D004674 ORTHO05D007261 4.0e-169 599.0 521 64.7
unitig_60.g25534 Utricularia gibba HOM05D004674 ORTHO05D007261 4.0e-169 599.0 516 61.6
Aa31LG1G14940 Aethionema arabicum HOM05D004674 ORTHO05D007261 3.8e-167 592.4 492 64.8
Sp2g30300 Schrenkiella parvula HOM05D004674 ORTHO05D007261 3.2e-166 589.3 464 67.5
FvH4_1g12760 Fragaria vesca HOM05D004674 ORTHO05D007261 5.6e-163 578.6 462 68.6
Atru.chr3.652 Acer truncatum HOM05D004674 ORTHO05D007261 6.9e-161 571.6 412 70.6
COL.COLO4_22029 Corchorus olitorius HOM05D004674 ORTHO05D007261 3.9e-156 555.8 425 66.4
Potri.005G120100 Populus trichocarpa HOM05D004674 ORTHO05D007261 6.2e-154 548.5 392 71.9
Manes.02G097100 Manihot esculenta HOM05D004674 ORTHO05D007261 1.1e-153 547.7 524 59.0
SEGI_40838 Sequoiadendron giganteum HOM05D004674 ORTHO05D007261 8.4e-151 538.1 625 50.7
TWI09G0580 Tripterygium wilfordii HOM05D004674 ORTHO05D007261 7.4e-147 525.0 393 68.7
Pp3c20_8030 Physcomitrium patens HOM05D004674 ORTHO05D007261 2.2e-143 513.5 535 53.1
SMO367G0601 Selaginella moellendorffii HOM05D004674 ORTHO05D007261 2.8e-138 496.5 524 53.1
Gohir.A11G182500 Gossypium hirsutum HOM05D004674 ORTHO05D007261 6.5e-135 485.3 383 64.5
Actinidia35628 Actinidia chinensis HOM05D004674 ORTHO05D007261 7.9e-133 478.4 343 72.6
PSO407G0425 Papaver somniferum HOM05D004674 ORTHO05D007261 7.9e-133 478.4 386 62.7
PSO170G6195 Papaver somniferum HOM05D004674 ORTHO05D007261 5.7e-131 472.2 387 62.8
Actinidia19204 Actinidia chinensis HOM05D004674 ORTHO05D007261 2.4e-129 466.8 361 66.8
Gorai.007G201400 Gossypium raimondii HOM05D004674 ORTHO05D007261 6.9e-129 465.3 370 64.9
Gohir.D11G189150 Gossypium hirsutum HOM05D004674 ORTHO05D007261 2.9e-127 459.9 370 64.3
Dinv40019 Davidia involucrata HOM05D004674 ORTHO05D007261 1.4e-121 441.0 308 76.0
MELO3C010392.2 Cucumis melo HOM05D004674 ORTHO05D007261 2.6e-115 420.2 495 50.9
MELO3C007854.2 Cucumis melo HOM05D004674 ORTHO05D007261 1.4e-92 344.7 511 44.0
AagrBONN_evm.TU.Sc2ySwM_344.2833 Anthoceros agrestis HOM05D004674 ORTHO05D007261 2.8e-90 337.0 425 45.6
Duzib147G1548 Durio zibethinus HOM05D004674 ORTHO05D007261 3.9e-71 273.5 230 63.5
QL03p066021 Quercus lobata HOM05D004674 ORTHO05D029177 3.4e-59 233.8 300 47.7
Phvul.003G256200 Phaseolus vulgaris HOM05D004674 ORTHO05D007261 3.7e-58 230.3 142 79.6
Ca_06503_v3 Cicer arietinum L. HOM05D000059 ORTHO05D000128 8.6e-55 219.2 447 38.9
Glyma.16G133933 Glycine max HOM05D004674 ORTHO05D007261 8.6e-55 219.2 156 71.8
Lj4C205T11 Lonicera japonica HOM05D004674 ORTHO05D007261 1.5e-46 191.8 304 45.1
Ca_07052_v3 Cicer arietinum L. HOM05D004674 ORTHO05D007261 2.8e-45 187.6 161 58.4
Ca_22377_v3 Cicer arietinum L. HOM05D004674 ORTHO05D007261 6.9e-44 183.0 144 61.8
Dinv40102 Davidia involucrata HOM05D004674 ORTHO05D020551 3.9e-39 167.2 128 68.0
MD02G1142800 Malus domestica HOM05D004674 ORTHO05D020551 3.2e-33 147.5 135 61.5
SEGI_19277 Sequoiadendron giganteum HOM05D004674 ORTHO05D020551 6.0e-32 143.3 296 34.1
Psat0s3062g0040 Pisum sativum HOM05D004674 ORTHO05D007261 8.7e-31 139.4 127 62.2
MELO3C028475.2 Cucumis melo HOM05D004674 ORTHO05D029177 9.6e-30 136.0 93 71.0
MD02G1142700 Malus domestica HOM05D004674 ORTHO05D007261 1.6e-24 118.6 68 86.8
arahy.Tifrunner.gnm1.ann1.TV0A1X Arachis hypogaea HOM05D004674 ORTHO05D007261 1.0e-23 115.9 113 54.0
Zm00001eb135660 Zea mays HOM05D004674 ORTHO05D007261 1.1e-22 112.5 77 74.0
Psat2g002040 Pisum sativum HOM05D004674 ORTHO05D327579 5.3e-20 103.6 132 46.2
MD02G1142900 Malus domestica HOM05D004674 ORTHO05D007261 2.6e-19 101.3 97 61.9
GSVIVG01017515001 Vitis vinifera HOM05D004674 ORTHO05D020551 9.3e-17 92.8 58 70.7
GSVIVG01005333001 Vitis vinifera HOM05D004674 ORTHO05D020551 1.0e-15 89.4 58 67.2
Gohir.A06G159466 Gossypium hirsutum HOM05D004674 ORTHO05D029177 1.3e-15 89.0 52 84.6
HanXRQChr08g0221331 Helianthus annuus HOM05D004674 ORTHO05D021509 6.7e-15 86.7 63 71.4
Gorai.010G192800 Gossypium raimondii HOM05D004674 ORTHO05D029177 2.5e-14 84.7 52 80.8
SGA_v2.0_scaffold48G18033 Striga asiatica HOM05D004674 ORTHO05D051422 6.3e-13 80.1 125 37.6
FAN23G1600 Fragaria x ananassa HOM05D004674 ORTHO05D045629 1.1e-12 79.3 79 55.7
Duzib248G0237 Durio zibethinus HOM05D004674 ORTHO05D020551 1.7e-10 72.0 44 75.0
FAN14G4531 Fragaria x ananassa HOM05D004674 ORTHO05D020551 1.1e-09 69.3 76 48.7
MELO3C028160.2 Cucumis melo HOM05D004674 ORTHO05D029175 1.8e-07 62.0 34 91.2
Sabra05G0098800 Salix brachista HOM05D004674 ORTHO05D349121 2.3e-07 61.6 52 67.3


User provided reference genes

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