Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR376G0365 Trochodendron aralioides HOM05D003723 ORTHO05D004306 7.2e-56 220.3 110 100.0
TAR628G0363 Trochodendron aralioides HOM05D003723 ORTHO05D004306 6.6e-49 197.2 109 88.1
GSVIVG01009321001 Vitis vinifera HOM05D003723 ORTHO05D004306 6.4e-44 180.6 111 81.1
TWI56G1015 Tripterygium wilfordii HOM05D003723 ORTHO05D004306 3.2e-43 178.3 111 80.2
Haze_22418 Corylus avellana HOM05D003723 ORTHO05D004306 3.5e-42 174.9 111 78.4
CSS0010741 Camellia sinensis var. sinensis HOM05D003723 ORTHO05D004306 4.6e-42 174.5 111 79.3
CSS0046104 Camellia sinensis var. sinensis HOM05D003723 ORTHO05D004306 4.6e-42 174.5 111 79.3
Cfa013762 Carpinus fangiana HOM05D003723 ORTHO05D004306 4.6e-42 174.5 111 78.4
RcHm_v2.0_Chr6g0309831 Rosa chinensis HOM05D003723 ORTHO05D004306 6.0e-42 174.1 111 76.6
CiPaw.08G050900 Carya illinoinensis HOM05D003723 ORTHO05D004306 1.0e-41 173.3 111 77.5
Nitab4.5_0003725g0010 Nicotiana tabacum HOM05D003723 ORTHO05D004306 1.0e-41 173.3 112 76.8
FvH4_2g32880 Fragaria vesca HOM05D003723 ORTHO05D004306 1.3e-41 172.9 111 76.6
FAN15G1506 Fragaria x ananassa HOM05D003723 ORTHO05D004306 1.3e-41 172.9 111 76.6
QL12p038269 Quercus lobata HOM05D003723 ORTHO05D004306 1.3e-41 172.9 111 77.5
QL93p0154_0009 Quercus lobata HOM05D003723 ORTHO05D004306 1.3e-41 172.9 111 77.5
Nitab4.5_0000497g0070 Nicotiana tabacum HOM05D003723 ORTHO05D004306 2.3e-41 172.2 112 75.9
FAN20G3047 Fragaria x ananassa HOM05D003723 ORTHO05D004306 3.0e-41 171.8 111 75.7
FAN24G1723 Fragaria x ananassa HOM05D003723 ORTHO05D004306 3.0e-41 171.8 111 76.6
FAN27G2988 Fragaria x ananassa HOM05D003723 ORTHO05D004306 6.6e-41 170.6 111 75.7
PSO541G5768 Papaver somniferum HOM05D003723 ORTHO05D004306 6.6e-41 170.6 109 74.3
TWI12G0955 Tripterygium wilfordii HOM05D003723 ORTHO05D004306 6.6e-41 170.6 111 76.6
Actinidia19301 Actinidia chinensis HOM05D003723 ORTHO05D004306 1.1e-40 169.9 111 76.6
Sc02g0007980 Simmondsia chinensis HOM05D003723 ORTHO05D004306 3.3e-40 168.3 111 75.7
CiPaw.07G173600 Carya illinoinensis HOM05D003723 ORTHO05D004306 5.6e-40 167.5 111 74.8
PSO017G5808 Papaver somniferum HOM05D003723 ORTHO05D004306 5.6e-40 167.5 109 73.4
Nitab4.5_0009040g0020 Nicotiana tabacum HOM05D003723 ORTHO05D004306 7.3e-40 167.2 111 74.8
AUR62022465 Chenopodium quinoa HOM05D003723 ORTHO05D004306 9.5e-40 166.8 111 73.9
AUR62043254 Chenopodium quinoa HOM05D003723 ORTHO05D004306 9.5e-40 166.8 111 73.9
Solyc04g077680.3 Solanum lycopersicum HOM05D003723 ORTHO05D004306 9.5e-40 166.8 111 76.6
Atru.chr13.849 Acer truncatum HOM05D003723 ORTHO05D004306 1.6e-39 166.0 105 76.2
Aqoxy3G00456 Aquilegia oxysepala HOM05D003723 ORTHO05D004306 1.6e-39 166.0 102 78.4
Manes.02G183600 Manihot esculenta HOM05D003723 ORTHO05D004306 1.6e-39 166.0 111 73.9
vmacro16900 Vaccinium macrocarpon HOM05D003723 ORTHO05D004306 1.6e-39 166.0 111 73.9
Cpa.g.sc142.42 Carica papaya HOM05D003723 ORTHO05D004306 2.1e-39 165.6 102 78.4
Dinv44943 Davidia involucrata HOM05D003723 ORTHO05D004306 2.1e-39 165.6 109 77.1
Sopen04g031320 Solanum pennellii HOM05D003723 ORTHO05D004306 2.1e-39 165.6 111 76.6
PGSC0003DMG401010623 Solanum tuberosum HOM05D003723 ORTHO05D004306 2.1e-39 165.6 111 76.6
Peaxi162Scf00081g02729 Petunia axillaris HOM05D003723 ORTHO05D004306 3.6e-39 164.9 109 75.2
BcaC01g04785 Brassica carinata HOM05D003723 ORTHO05D004306 4.7e-39 164.5 102 75.5
A03p27910 Brassica napus HOM05D003723 ORTHO05D004306 4.7e-39 164.5 102 75.5
BraA03t12004Z Brassica rapa HOM05D003723 ORTHO05D004306 4.7e-39 164.5 102 75.5
MD08G1080300 Malus domestica HOM05D003723 ORTHO05D004306 4.7e-39 164.5 111 73.0
Sopen12g030290 Solanum pennellii HOM05D003723 ORTHO05D004306 4.7e-39 164.5 111 73.9
MD15G1067400 Malus domestica HOM05D003723 ORTHO05D004306 6.2e-39 164.1 111 73.0
Prupe.1G421300 Prunus persica HOM05D003723 ORTHO05D004306 6.2e-39 164.1 111 73.0
Nitab4.5_0002314g0030 Nicotiana tabacum HOM05D003723 ORTHO05D004306 8.0e-39 163.7 111 73.9
Cc10_g05060 Coffea canephora HOM05D003723 ORTHO05D004306 1.1e-38 163.3 111 73.0
Sabra02G0092000 Salix brachista HOM05D003723 ORTHO05D004306 1.1e-38 163.3 108 73.1
Aa31sc622G20 Aethionema arabicum HOM05D003723 ORTHO05D004306 1.4e-38 162.9 111 73.0
BcaB01g02881 Brassica carinata HOM05D003723 ORTHO05D004306 1.4e-38 162.9 102 77.5
C03p33700 Brassica napus HOM05D003723 ORTHO05D004306 1.4e-38 162.9 102 75.5
BolC3t15689H Brassica oleracea HOM05D003723 ORTHO05D004306 1.4e-38 162.9 102 75.5
PGSC0003DMG400011543 Solanum tuberosum HOM05D003723 ORTHO05D004306 1.4e-38 162.9 111 73.9
AL6G41310 Arabidopsis lyrata HOM05D003723 ORTHO05D004306 1.8e-38 162.5 101 78.2
Lj4C72T17 Lonicera japonica HOM05D003723 ORTHO05D004306 2.3e-38 162.2 110 71.8
Solyc12g088290.2 Solanum lycopersicum HOM05D003723 ORTHO05D004306 2.3e-38 162.2 111 73.9
Carub.0006s2652 Capsella rubella HOM05D003723 ORTHO05D004306 3.1e-38 161.8 102 76.5
Potri.002G117500 Populus trichocarpa HOM05D003723 ORTHO05D004306 3.1e-38 161.8 108 73.1
Eucgr.F02239 Eucalyptus grandis HOM05D003723 ORTHO05D004306 4.0e-38 161.4 111 72.1
Thhalv10028433m.g Eutrema salsugineum HOM05D003723 ORTHO05D004306 5.2e-38 161.0 102 75.5
Sp6g10450 Schrenkiella parvula HOM05D003723 ORTHO05D004306 6.8e-38 160.6 102 73.5
AT4G07410 Arabidopsis thaliana HOM05D003723 ORTHO05D004306 8.9e-38 160.2 102 76.5
Lj4A757T32 Lonicera japonica HOM05D003723 ORTHO05D004306 8.9e-38 160.2 110 72.7
CANSAT25G0987 Cannabis sativa HOM05D003723 ORTHO05D004306 1.2e-37 159.8 107 72.0
Lsat_1_v5_gn_1_1120 Lactuca sativa HOM05D003723 ORTHO05D004306 1.2e-37 159.8 112 70.5
Lsat_1_v5_gn_1_440 Lactuca sativa HOM05D003723 ORTHO05D004306 1.2e-37 159.8 112 70.5
CDE04G2329 Ceratophyllum demersum HOM05D003723 ORTHO05D004306 2.0e-37 159.1 109 71.6
CDE07G0463 Ceratophyllum demersum HOM05D003723 ORTHO05D004306 2.0e-37 159.1 109 71.6
MELO3C016827.2 Cucumis melo HOM05D003723 ORTHO05D004306 2.0e-37 159.1 111 73.0
CsaV3_4G035140 Cucumis sativus L. HOM05D003723 ORTHO05D004306 2.6e-37 158.7 111 73.0
Sabra14G0008900 Salix brachista HOM05D003723 ORTHO05D004306 2.6e-37 158.7 107 74.8
SGA_v2.0_scaffold152G36813 Striga asiatica HOM05D003723 ORTHO05D004306 2.6e-37 158.7 111 72.1
CARHR287080 Cardamine hirsuta HOM05D003723 ORTHO05D004306 3.4e-37 158.3 103 73.8
Manes.18G095200 Manihot esculenta HOM05D003723 ORTHO05D004306 4.4e-37 157.9 111 71.2
Potri.014G014900 Populus trichocarpa HOM05D003723 ORTHO05D004306 5.8e-37 157.5 107 73.8
ClCG05G020690 Citrullus lanatus HOM05D003723 ORTHO05D004306 9.8e-37 156.8 111 72.1
EL10Ac1g02364 Beta vulgaris HOM05D003723 ORTHO05D004306 1.3e-36 156.4 111 69.4
Thecc.04G063000 Theobroma cacao HOM05D003723 ORTHO05D004306 1.3e-36 156.4 111 73.0
Ciclev10000301m.g Citrus clementina HOM05D003723 ORTHO05D004306 1.7e-36 156.0 108 69.4
Gohir.A02G089200 Gossypium hirsutum HOM05D003723 ORTHO05D004306 1.7e-36 156.0 111 71.2
Oeu036976.1 Olea europaea HOM05D003723 ORTHO05D004306 1.7e-36 156.0 111 69.4
DCAR_009874 Daucus carota HOM05D003723 ORTHO05D004306 2.9e-36 155.2 113 67.3
Gohir.D02G112100 Gossypium hirsutum HOM05D003723 ORTHO05D004306 2.9e-36 155.2 111 71.2
Gorai.005G127000 Gossypium raimondii HOM05D003723 ORTHO05D004306 2.9e-36 155.2 111 71.2
BolC5t31333H Brassica oleracea HOM05D003723 ORTHO05D004306 3.7e-36 154.8 100 74.0
Duzib151G0173 Durio zibethinus HOM05D003723 ORTHO05D004306 3.7e-36 154.8 111 72.1
SalBow2G1921 Salvia bowleyana HOM05D003723 ORTHO05D004306 3.7e-36 154.8 102 73.5
SGA_v2.0_scaffold28G11839 Striga asiatica HOM05D003723 ORTHO05D004306 3.7e-36 154.8 111 71.2
BcaC05g26751 Brassica carinata HOM05D003723 ORTHO05D004306 4.9e-36 154.5 100 72.0
Oeu014279.1 Olea europaea HOM05D003723 ORTHO05D004306 6.4e-36 154.1 111 68.5
BcaC05g26567 Brassica carinata HOM05D003723 ORTHO05D004306 8.3e-36 153.7 100 73.0
C05p26190 Brassica napus HOM05D003723 ORTHO05D004306 8.3e-36 153.7 100 73.0
ECA247G0551 Erigeron canadensis HOM05D003723 ORTHO05D004306 1.1e-35 153.3 112 67.9
Gohir.A10G151900 Gossypium hirsutum HOM05D003723 ORTHO05D004306 1.4e-35 152.9 111 71.2
A09p38510 Brassica napus HOM05D003723 ORTHO05D004306 2.4e-35 152.1 100 72.0
BraA09t39357Z Brassica rapa HOM05D003723 ORTHO05D004306 2.4e-35 152.1 100 72.0
Sp1g23720 Schrenkiella parvula HOM05D003723 ORTHO05D004306 2.4e-35 152.1 100 73.0
Ah.05g167030 Amaranthus hybridus HOM05D003723 ORTHO05D004306 3.2e-35 151.8 102 67.6
Hund05292 Selenicereus undatus HOM05D003723 ORTHO05D004306 5.4e-35 151.0 110 68.2
AT1G27470 Arabidopsis thaliana HOM05D003723 ORTHO05D004306 1.2e-34 149.8 101 73.3
Gohir.D10G114400 Gossypium hirsutum HOM05D003723 ORTHO05D004306 1.6e-34 149.4 111 69.4
Gorai.011G126100 Gossypium raimondii HOM05D003723 ORTHO05D004306 1.6e-34 149.4 111 69.4
Sed0028163 Sechium edule HOM05D003723 ORTHO05D004306 1.6e-34 149.4 111 69.4
HanXRQChr10g0292161 Helianthus annuus HOM05D003723 ORTHO05D004306 2.1e-34 149.1 110 66.4
PGR031G2627 Punica granatum HOM05D003723 ORTHO05D004306 2.1e-34 149.1 110 69.1
Aa31LG7G10210 Aethionema arabicum HOM05D003723 ORTHO05D004306 6.0e-34 147.5 102 71.6
AL1G40900 Arabidopsis lyrata HOM05D003723 ORTHO05D004306 6.0e-34 147.5 102 70.6
Carub.0001s2603 Capsella rubella HOM05D003723 ORTHO05D004306 7.8e-34 147.1 102 69.6
DCAR_012822 Daucus carota HOM05D003723 ORTHO05D004306 7.8e-34 147.1 109 67.9
DCAR_004814 Daucus carota HOM05D003723 ORTHO05D004306 1.3e-33 146.4 102 70.6
Thhalv10006817m.g Eutrema salsugineum HOM05D003723 ORTHO05D004306 1.3e-33 146.4 102 69.6
HanXRQChr10g0292141 Helianthus annuus HOM05D003723 ORTHO05D004306 1.3e-33 146.4 110 64.5
ATR0739G177 Amborella trichopoda HOM05D003723 ORTHO05D004306 2.3e-33 145.6 110 67.3
MSTRG.24381 Avicennia marina HOM05D003723 ORTHO05D004306 2.3e-33 145.6 110 66.4
arahy.Tifrunner.gnm1.ann1.YU9IEB Arachis hypogaea HOM05D003723 ORTHO05D004306 3.0e-33 145.2 111 64.0
arahy.Tifrunner.gnm1.ann1.82WHW6 Arachis hypogaea HOM05D003723 ORTHO05D004306 6.6e-33 144.1 111 63.1
Glyma.14G089042 Glycine max HOM05D003723 ORTHO05D004306 1.5e-32 142.9 109 64.2
Lj5g0007294 Lotus japonicus HOM05D003723 ORTHO05D004306 1.9e-32 142.5 102 65.7
BcaC01g06947 Brassica carinata HOM05D003723 ORTHO05D004306 4.3e-32 141.4 100 71.0
BraA08t34575Z Brassica rapa HOM05D003723 ORTHO05D004306 4.3e-32 141.4 100 67.0
A08p26240 Brassica napus HOM05D003723 ORTHO05D004306 5.6e-32 141.0 100 67.0
DCAR_032227 Daucus carota HOM05D003723 ORTHO05D004306 5.6e-32 141.0 99 66.7
BcaC01g01603 Brassica carinata HOM05D003723 ORTHO05D004306 9.5e-32 140.2 100 67.0
C03p74200 Brassica napus HOM05D003723 ORTHO05D004306 9.5e-32 140.2 100 67.0
BolC3t19677H Brassica oleracea HOM05D003723 ORTHO05D004306 9.5e-32 140.2 100 67.0
Lalb_Chr14g0368121 Lupinus albus HOM05D003723 ORTHO05D004306 9.5e-32 140.2 103 64.1
Glyma.17G233900 Glycine max HOM05D003723 ORTHO05D004306 2.1e-31 139.0 109 62.4
Phvul.001G028900 Phaseolus vulgaris HOM05D003723 ORTHO05D004306 2.1e-31 139.0 106 62.3
TPR.G12983 Trifolium pratense HOM05D003723 ORTHO05D004306 2.8e-31 138.7 102 63.7
Migut.N02791 Erythranthe guttata HOM05D003723 ORTHO05D004306 3.6e-31 138.3 94 71.3
THA.LOC104824968 Tarenaya hassleriana HOM05D003723 ORTHO05D004306 3.6e-31 138.3 106 65.1
CARHR027080 Cardamine hirsuta HOM05D003723 ORTHO05D004306 8.1e-31 137.1 100 67.0
HPP92_003353 Vanilla planifolia HOM05D003723 ORTHO05D004306 8.1e-31 137.1 110 62.7
Medtr8g014080 Medicago truncatula HOM05D003723 ORTHO05D004306 1.1e-30 136.7 103 61.2
VMungo0647G0070 Vigna mungo HOM05D003723 ORTHO05D004306 1.4e-30 136.3 106 61.3
Psat6g017680 Pisum sativum HOM05D003723 ORTHO05D004306 1.8e-30 136.0 100 63.0
Ca_23258_v3 Cicer arietinum L. HOM05D003723 ORTHO05D004306 3.1e-30 135.2 106 60.4
Lalb_Chr22g0355711 Lupinus albus HOM05D003723 ORTHO05D004306 5.2e-30 134.4 111 62.2
Ca_13209_v3 Cicer arietinum L. HOM05D003723 ORTHO05D004306 6.8e-30 134.0 99 64.6
THA.LOC104825785 Tarenaya hassleriana HOM05D003723 ORTHO05D004306 6.8e-30 134.0 100 66.0
Zm00001eb056350 Zea mays HOM05D003723 ORTHO05D004306 1.5e-29 132.9 100 61.0
Medtr1g017880 Medicago truncatula HOM05D003723 ORTHO05D004306 2.0e-29 132.5 98 63.3
TPR.G32238 Trifolium pratense HOM05D003723 ORTHO05D004306 2.9e-28 128.6 123 53.7
Zm00001eb215430 Zea mays HOM05D003723 ORTHO05D004306 2.9e-28 128.6 100 63.0
Os03g0735100 Oryza sativa ssp. japonica HOM05D003723 ORTHO05D004306 1.1e-27 126.7 100 60.0
Zm00001eb382220 Zea mays HOM05D002544 ORTHO05D007856 1.1e-27 126.7 96 62.5
Zm00001eb280470 Zea mays HOM05D003723 ORTHO05D004306 2.4e-27 125.6 96 61.5
SEGI_10786 Sequoiadendron giganteum HOM05D003723 ORTHO05D004306 7.1e-27 124.0 109 55.0
Peaxi162Scf00160g00521 Petunia axillaris HOM05D003723 ORTHO05D004306 6.6e-25 117.5 84 69.0
Pp3c19_13580 Physcomitrium patens HOM05D003723 ORTHO05D004306 1.9e-24 115.9 111 51.4
Pp3c22_14490 Physcomitrium patens HOM05D003723 ORTHO05D004306 2.1e-23 112.5 111 49.5
Mapoly0027s0127 Marchantia polymorpha HOM05D003723 ORTHO05D004306 4.7e-23 111.3 111 51.4
CBR_g57871 Chara braunii HOM05D003723 ORTHO05D004306 2.4e-22 109.0 98 50.0
AagrBONN_evm.TU.Sc2ySwM_344.864 Anthoceros agrestis HOM05D003723 ORTHO05D004306 3.1e-22 108.6 108 48.1
SMO367G0860 Selaginella moellendorffii HOM05D003723 ORTHO05D004306 1.7e-20 102.8 102 48.0
COL.COLO4_29256 Corchorus olitorius HOM05D003723 ORTHO05D004306 2.8e-15 85.5 54 79.6
Hma1.2p1_0210F.1_g089420 Hydrangea macrophylla HOM05D003723 ORTHO05D004306 6.9e-14 80.9 55 72.7
unitig_0.g1045 Utricularia gibba HOM05D003723 ORTHO05D004306 1.7e-12 76.3 46 76.1
Pp3c18_6690 Physcomitrium patens HOM05D003723 ORTHO05D004306 1.1e-11 73.6 101 41.6
MCO10G249 Micromonas commoda HOM05D003723 ORTHO05D004306 3.2e-11 72.0 118 36.4


User provided reference genes

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