Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR374G1125 Trochodendron aralioides HOM05D006564 ORTHO05D007772 3.9e-99 364.8 182 100.0
TAR622G0653 Trochodendron aralioides HOM05D006564 ORTHO05D007772 4.1e-48 195.3 218 55.0
Dinv24837 Davidia involucrata HOM05D006564 ORTHO05D007772 1.1e-43 180.6 214 50.9
Aqoxy3G02914 Aquilegia oxysepala HOM05D006564 ORTHO05D007772 1.3e-38 163.7 216 47.7
Cfa009164 Carpinus fangiana HOM05D006564 ORTHO05D007772 2.5e-37 159.5 215 43.7
MD16G1094900 Malus domestica HOM05D006564 ORTHO05D007772 5.2e-35 151.8 213 42.7
Hma1.2p1_0536F.1_g173940 Hydrangea macrophylla HOM05D006564 ORTHO05D007772 6.8e-35 151.4 214 42.5
Atru.chr11.2047 Acer truncatum HOM05D006564 ORTHO05D007772 1.5e-34 150.2 210 43.8
CANSAT01G1831 Cannabis sativa HOM05D006564 ORTHO05D007772 2.0e-34 149.8 213 45.5
QL03p059806 Quercus lobata HOM05D006564 ORTHO05D007772 9.9e-34 147.5 221 44.3
COL.COLO4_24191 Corchorus olitorius HOM05D006564 ORTHO05D007772 2.9e-33 146.0 185 45.4
Nn3g16844 Nelumbo nucifera HOM05D006564 ORTHO05D007772 2.9e-33 146.0 218 44.5
Prupe.1G251700 Prunus persica HOM05D006564 ORTHO05D007772 3.8e-33 145.6 213 42.3
MBI16_g27088_MAGBIO Magnolia biondii HOM05D006564 ORTHO05D007772 7.1e-32 141.4 233 38.6
PGR119G0202 Punica granatum HOM05D006564 ORTHO05D007772 7.1e-32 141.4 216 42.1
Potri.010G041900 Populus trichocarpa HOM05D006564 ORTHO05D007772 1.2e-31 140.6 211 41.7
PSO063G0329 Papaver somniferum HOM05D006564 ORTHO05D007772 1.6e-31 140.2 230 39.1
TWI75G0104 Tripterygium wilfordii HOM05D006564 ORTHO05D007772 1.6e-31 140.2 121 60.3
Manes.13G029100 Manihot esculenta HOM05D006564 ORTHO05D007772 2.1e-31 139.8 125 60.8
Lj3A1053T43 Lonicera japonica HOM05D006564 ORTHO05D007772 3.5e-31 139.0 120 59.2
GSVIVG01013762001 Vitis vinifera HOM05D006564 ORTHO05D007772 7.8e-31 137.9 115 63.5
PSO832G2728 Papaver somniferum HOM05D006564 ORTHO05D007772 1.3e-30 137.1 218 40.4
AUR62014056 Chenopodium quinoa HOM05D006564 ORTHO05D007772 3.9e-30 135.6 181 46.4
Rhsim12G0044200 Rhododendron simsii HOM05D006564 ORTHO05D007772 6.6e-30 134.8 216 41.2
Lalb_Chr05g0216811 Lupinus albus HOM05D006564 ORTHO05D007772 1.1e-29 134.0 120 55.0
Haze_12197 Corylus avellana HOM05D006564 ORTHO05D007772 2.5e-29 132.9 203 41.9
arahy.Tifrunner.gnm1.ann1.T8BVJ1 Arachis hypogaea HOM05D006564 ORTHO05D007772 7.3e-29 131.3 205 39.5
Ciclev10033458m.g Citrus clementina HOM05D006564 ORTHO05D007772 7.3e-29 131.3 216 43.1
AUR62005394 Chenopodium quinoa HOM05D006564 ORTHO05D007772 1.2e-28 130.6 181 45.3
Hund06003 Selenicereus undatus HOM05D006564 ORTHO05D007772 2.1e-28 129.8 220 39.1
Ca_03150_v3 Cicer arietinum L. HOM05D006564 ORTHO05D007772 3.6e-28 129.0 119 53.8
arahy.Tifrunner.gnm1.ann1.FI0FWQ Arachis hypogaea HOM05D006564 ORTHO05D007772 4.7e-28 128.6 189 41.3
Psat2g104680 Pisum sativum HOM05D006564 ORTHO05D007772 6.2e-28 128.3 205 38.5
FvH4_4g34230 Fragaria vesca HOM05D006564 ORTHO05D007772 8.1e-28 127.9 210 42.9
Gorai.010G099700 Gossypium raimondii HOM05D006564 ORTHO05D007772 1.1e-27 127.5 133 52.6
Lsat_1_v5_gn_4_5380 Lactuca sativa HOM05D006564 ORTHO05D007772 1.8e-27 126.7 213 40.4
Gohir.A06G086900 Gossypium hirsutum HOM05D006564 ORTHO05D007772 6.9e-27 124.8 113 58.4
Gohir.D06G086400 Gossypium hirsutum HOM05D006564 ORTHO05D007772 6.9e-27 124.8 215 40.0
Lj2g0026051 Lotus japonicus HOM05D006564 ORTHO05D007772 6.9e-27 124.8 119 52.1
THA.LOC104827560 Tarenaya hassleriana HOM05D006564 ORTHO05D007772 6.9e-27 124.8 212 39.6
TPR.G21085 Trifolium pratense HOM05D006564 ORTHO05D007772 6.9e-27 124.8 119 51.3
Peaxi162Scf00075g02124 Petunia axillaris HOM05D006564 ORTHO05D007772 1.2e-26 124.0 186 41.9
EL10Ac6g13691 Beta vulgaris HOM05D006564 ORTHO05D007772 2.6e-26 122.9 120 53.3
VMungo1215G0480 Vigna mungo HOM05D006564 ORTHO05D007772 3.4e-26 122.5 120 51.7
Medtr5g034180 Medicago truncatula HOM05D006564 ORTHO05D007772 5.8e-26 121.7 119 50.4
Migut.E00581 Erythranthe guttata HOM05D006564 ORTHO05D007772 1.3e-25 120.6 193 43.0
Sabra10G0025500 Salix brachista HOM05D006564 ORTHO05D007772 1.3e-25 120.6 238 36.1
RcHm_v2.0_Chr4g0443681 Rosa chinensis HOM05D006564 ORTHO05D007772 2.9e-25 119.4 111 57.7
Glyma.01G029900 Glycine max HOM05D006564 ORTHO05D007772 6.4e-25 118.2 118 51.7
Phvul.002G070600 Phaseolus vulgaris HOM05D006564 ORTHO05D007772 8.4e-25 117.9 118 50.8
SalBow1G6981 Salvia bowleyana HOM05D006564 ORTHO05D007772 8.4e-25 117.9 191 40.3
Carub.0002s0487 Capsella rubella HOM05D006564 ORTHO05D007772 1.9e-24 116.7 212 36.8
FAN22G1362 Fragaria x ananassa HOM05D006564 ORTHO05D007772 4.2e-24 115.5 111 56.8
FAN12G0482 Fragaria x ananassa HOM05D006564 ORTHO05D007772 5.4e-24 115.2 108 58.3
CARHR052570 Cardamine hirsuta HOM05D006564 ORTHO05D007772 1.6e-23 113.6 209 35.4
Sp2g04270 Schrenkiella parvula HOM05D006564 ORTHO05D007772 1.6e-23 113.6 214 36.4
Sc04g0009220 Simmondsia chinensis HOM05D006564 ORTHO05D007772 3.5e-23 112.5 118 49.2
PGSC0003DMG401026086 Solanum tuberosum HOM05D006564 ORTHO05D007772 7.8e-23 111.3 180 38.3
Nitab4.5_0004611g0020 Nicotiana tabacum HOM05D006564 ORTHO05D007772 1.0e-22 110.9 202 37.6
AT1G60460 Arabidopsis thaliana HOM05D006564 ORTHO05D007772 1.3e-22 110.5 212 35.8
Cc11_g15240 Coffea canephora HOM05D006564 ORTHO05D007772 1.7e-22 110.2 122 47.5
Solyc06g065620.2 Solanum lycopersicum HOM05D006564 ORTHO05D007772 1.7e-22 110.2 211 35.1
SGA_v2.0_scaffold276G46631 Striga asiatica HOM05D006564 ORTHO05D007772 1.7e-22 110.2 213 36.6
AL2G16230 Arabidopsis lyrata HOM05D006564 ORTHO05D007772 2.3e-22 109.8 212 35.4
ClCG08G018020 Citrullus lanatus HOM05D006564 ORTHO05D007772 5.1e-22 108.6 114 49.1
A01p29270 Brassica napus HOM05D006564 ORTHO05D007772 6.6e-22 108.2 209 34.9
Thhalv10023451m.g Eutrema salsugineum HOM05D006564 ORTHO05D007772 6.6e-22 108.2 111 51.4
Nitab4.5_0003128g0060 Nicotiana tabacum HOM05D006564 ORTHO05D007772 8.7e-22 107.8 108 50.9
Eucgr.H02586 Eucalyptus grandis HOM05D006564 ORTHO05D007772 1.5e-21 107.1 94 56.4
ClCG08G017970 Citrullus lanatus HOM05D006564 ORTHO05D007772 1.9e-21 106.7 112 49.1
ECA234G3669 Erigeron canadensis HOM05D006564 ORTHO05D007772 2.5e-21 106.3 227 33.0
BcaB04g20267 Brassica carinata HOM05D006564 ORTHO05D007772 3.3e-21 105.9 201 35.8
BraA01t03060Z Brassica rapa HOM05D006564 ORTHO05D007772 4.3e-21 105.5 209 34.4
Sed0020482 Sechium edule HOM05D006564 ORTHO05D007772 2.1e-20 103.2 112 48.2
Aa31LG2G9990 Aethionema arabicum HOM05D006564 ORTHO05D007772 1.1e-19 100.9 113 46.9
CsaV3_2G024630 Cucumis sativus L. HOM05D006564 ORTHO05D007772 1.8e-19 100.1 112 45.5
BolC1t03666H Brassica oleracea HOM05D006564 ORTHO05D007772 4.0e-19 99.0 109 47.7
ATR1091G047 Amborella trichopoda HOM05D006564 ORTHO05D007772 1.2e-18 97.4 107 48.6
C01p37040 Brassica napus HOM05D006564 ORTHO05D007772 3.4e-18 95.9 109 45.9
MELO3C010665.2 Cucumis melo HOM05D006564 ORTHO05D007772 4.5e-18 95.5 110 45.5
BcaC09g49405 Brassica carinata HOM05D006564 ORTHO05D007772 5.8e-18 95.1 109 45.9
Oeu056406.1 Olea europaea HOM05D006564 ORTHO05D007772 1.1e-16 90.9 87 56.3
Actinidia01700 Actinidia chinensis HOM05D006564 ORTHO05D007772 1.4e-16 90.5 118 42.4
unitig_744.g23977 Utricularia gibba HOM05D006564 ORTHO05D007772 1.2e-15 87.4 106 48.1
Zm00001eb227420 Zea mays HOM05D006564 ORTHO05D007772 6.0e-15 85.1 140 38.6
SHI17558 Sapria himalayana HOM05D006564 ORTHO05D007772 2.3e-14 83.2 66 59.1
SEGI_36736 Sequoiadendron giganteum HOM05D006564 ORTHO05D007772 9.6e-13 77.8 111 36.9
CDE06G0043 Ceratophyllum demersum HOM05D006564 ORTHO05D007772 5.3e-11 72.0 89 49.4
CDE07G0681 Ceratophyllum demersum HOM05D006564 ORTHO05D007772 9.3e-08 61.2 168 30.4
CiPaw.05G152600 Carya illinoinensis HOM05D006564 ORTHO05D007772 1.8e-06 57.0 47 57.4
HPP92_021828 Vanilla planifolia HOM05D006564 ORTHO05D007772 1.8e-06 57.0 78 41.0


User provided reference genes

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