Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR374G0217 Trochodendron aralioides HOM05D004873 ORTHO05D006122 0.0e+00 1396.3 990 100.0
TAR622G0484 Trochodendron aralioides HOM05D004873 ORTHO05D006122 1.6e-287 993.0 991 77.9
Nn4g22808 Nelumbo nucifera HOM05D004873 ORTHO05D006122 2.4e-267 926.0 998 69.4
MBI15_g36943_MAGBIO Magnolia biondii HOM05D004873 ORTHO05D006122 1.3e-215 754.2 1015 63.8
CSS0025142 Camellia sinensis var. sinensis HOM05D004873 ORTHO05D006122 5.5e-211 738.8 1021 63.7
CiPaw.05G150500 Carya illinoinensis HOM05D004873 ORTHO05D006122 7.1e-203 711.8 996 60.0
Aqoxy3G02990_Aqoxy3G02991 Aquilegia oxysepala HOM05D004873 ORTHO05D006122 1.6e-202 710.7 952 63.6
GSVIVG01020233001 Vitis vinifera HOM05D004873 ORTHO05D006122 2.1e-202 710.3 832 64.1
Dinv24864 Davidia involucrata HOM05D004873 ORTHO05D006122 3.7e-199 699.5 794 65.1
Duzib251G0436 Durio zibethinus HOM05D004873 ORTHO05D006122 1.1e-198 698.0 994 55.2
PSO063G1237 Papaver somniferum HOM05D004873 ORTHO05D006122 2.4e-198 696.8 1002 63.9
Ciclev10030647m.g Citrus clementina HOM05D004873 ORTHO05D006122 3.8e-196 689.5 1000 59.6
Atru.chr11.2013 Acer truncatum HOM05D004873 ORTHO05D006122 5.5e-195 685.6 997 55.9
TWI18G0605 Tripterygium wilfordii HOM05D004873 ORTHO05D006122 1.5e-192 677.6 998 57.5
TWI36G0907 Tripterygium wilfordii HOM05D004873 ORTHO05D006122 9.7e-192 674.9 916 62.1
Hma1.2p1_0160F.1_g070740 Hydrangea macrophylla HOM05D004873 ORTHO05D006122 2.2e-191 673.7 924 58.1
TWI75G0297 Tripterygium wilfordii HOM05D004873 ORTHO05D006122 1.8e-190 670.6 1006 59.2
COL.COLO4_36971 Corchorus olitorius HOM05D004873 ORTHO05D006122 3.1e-190 669.8 852 53.1
Haze_12170 Corylus avellana HOM05D004873 ORTHO05D006122 5.3e-190 669.1 988 57.1
Duzib248G0479 Durio zibethinus HOM05D004873 ORTHO05D006122 2.2e-188 663.7 939 54.2
Dinv15307 Davidia involucrata HOM05D004873 ORTHO05D006122 5.5e-187 659.1 780 68.5
RcHm_v2.0_Chr4g0443951 Rosa chinensis HOM05D004873 ORTHO05D006122 2.7e-186 656.8 918 55.3
QL03p061438 Quercus lobata HOM05D004873 ORTHO05D006122 9.7e-184 648.3 787 65.8
Manes.13G031000 Manihot esculenta HOM05D004873 ORTHO05D006122 4.8e-183 646.0 780 66.3
Cfa009139 Carpinus fangiana HOM05D004873 ORTHO05D006122 1.8e-182 644.0 969 57.7
Prupe.1G254700 Prunus persica HOM05D004873 ORTHO05D006122 2.6e-181 640.2 778 67.7
Actinidia01706 Actinidia chinensis HOM05D004873 ORTHO05D006122 3.8e-180 636.3 1007 55.2
PSO832G2005 Papaver somniferum HOM05D004873 ORTHO05D006122 5.0e-180 636.0 1020 58.0
FAN22G1569 Fragaria x ananassa HOM05D004873 ORTHO05D006122 4.7e-178 629.4 928 55.1
MELO3C012001.2 Cucumis melo HOM05D004873 ORTHO05D006122 3.0e-177 626.7 1035 52.0
Ca_04600_v3 Cicer arietinum L. HOM05D004873 ORTHO05D006122 1.1e-176 624.8 937 54.2
ATR0691G293 Amborella trichopoda HOM05D004873 ORTHO05D006122 2.6e-176 623.6 1012 56.7
Sopen05g001620 Solanum pennellii HOM05D004873 ORTHO05D006122 4.8e-175 619.4 910 57.3
PGSC0003DMG400030977 Solanum tuberosum HOM05D004873 ORTHO05D006122 8.2e-175 618.6 910 56.5
Eucgr.B03347 Eucalyptus grandis HOM05D004873 ORTHO05D006122 4.1e-174 616.3 921 56.4
FvH4_4g34571 Fragaria vesca HOM05D004873 ORTHO05D006122 1.2e-173 614.8 974 54.5
vmacro01183 Vaccinium macrocarpon HOM05D004873 ORTHO05D006122 2.6e-173 613.6 954 59.1
CAN.G376.10 Capsicum annuum HOM05D004873 ORTHO05D006122 8.5e-172 608.6 841 57.1
Oeu055452.2 Olea europaea HOM05D004873 ORTHO05D006122 4.2e-171 606.3 1067 46.7
Potri.010G094700 Populus trichocarpa HOM05D004873 ORTHO05D006122 1.6e-170 604.4 943 61.4
FAN12G3868 Fragaria x ananassa HOM05D004873 ORTHO05D006122 4.7e-170 602.8 974 54.3
Sabra10G0067000 Salix brachista HOM05D004873 ORTHO05D006122 3.0e-169 600.1 934 57.9
Potri.008G147100 Populus trichocarpa HOM05D004873 ORTHO05D006122 3.3e-168 596.7 795 57.6
Lj6A805G39 Lonicera japonica HOM05D004873 ORTHO05D006122 5.7e-168 595.9 1065 52.3
FAN17G2310 Fragaria x ananassa HOM05D004873 ORTHO05D006122 1.7e-167 594.3 931 55.4
Hma1.2p1_0867F.1_g230230 Hydrangea macrophylla HOM05D004873 ORTHO05D006122 6.3e-167 592.4 813 55.6
arahy.Tifrunner.gnm1.ann1.SJZ9IC Arachis hypogaea HOM05D004873 ORTHO05D006122 5.9e-165 585.9 973 55.1
Medtr5g034430 Medicago truncatula HOM05D004873 ORTHO05D006122 1.0e-164 585.1 997 53.8
arahy.Tifrunner.gnm1.ann1.QGK7DH Arachis hypogaea HOM05D004873 ORTHO05D006122 3.2e-163 580.1 996 54.1
FAN07G2437 Fragaria x ananassa HOM05D004873 ORTHO05D006122 5.5e-163 579.3 779 59.2
TAR629G1177 Trochodendron aralioides HOM05D004873 ORTHO05D006122 9.4e-163 578.6 863 49.9
ClCG05G025280 Citrullus lanatus HOM05D004873 ORTHO05D006122 1.6e-162 577.8 1111 48.2
Cc11_g14610 Coffea canephora HOM05D004873 ORTHO05D006122 1.6e-162 577.8 923 54.1
Gorai.005G183000 Gossypium raimondii HOM05D004873 ORTHO05D006122 1.6e-162 577.8 814 56.8
TPR.G13590 Trifolium pratense HOM05D004873 ORTHO05D006122 1.6e-162 577.8 911 54.1
MD13G1091200 Malus domestica HOM05D004873 ORTHO05D006122 8.0e-162 575.5 775 60.1
DCAR_026543 Daucus carota HOM05D004873 ORTHO05D006122 1.4e-161 574.7 1022 47.7
Gohir.D02G163000 Gossypium hirsutum HOM05D004873 ORTHO05D006122 2.3e-161 573.9 814 56.1
CANSAT01G1467 Cannabis sativa HOM05D004873 ORTHO05D006122 4.0e-161 573.2 940 52.4
SGA_v2.0_scaffold165G38251 Striga asiatica HOM05D004873 ORTHO05D006122 4.0e-161 573.2 955 49.9
HPP92_019184 Vanilla planifolia HOM05D004873 ORTHO05D006122 8.8e-161 572.0 985 48.6
Rhsim12G0047400 Rhododendron simsii HOM05D004873 ORTHO05D006122 1.2e-160 571.6 969 54.0
MD16G1091700 Malus domestica HOM05D004873 ORTHO05D006122 5.7e-160 569.3 773 61.2
Peaxi162Scf00338g00218 Petunia axillaris HOM05D004873 ORTHO05D006122 1.9e-155 554.3 947 50.4
Glyma.01G031400 Glycine max HOM05D004873 ORTHO05D006122 3.2e-155 553.5 1021 50.8
Sed0006362 Sechium edule HOM05D004873 ORTHO05D006122 5.5e-155 552.7 791 55.6
DCAR_024143 Daucus carota HOM05D004873 ORTHO05D006122 6.1e-154 549.3 940 49.3
Cpa.g.sc69.19 Carica papaya HOM05D004873 ORTHO05D006122 3.4e-152 543.5 914 51.4
Lalb_Chr16g0392411 Lupinus albus HOM05D004873 ORTHO05D006122 6.3e-151 539.3 773 57.6
Migut.L01408 Erythranthe guttata HOM05D004873 ORTHO05D006122 1.8e-150 537.7 859 56.8
VMungo1215G2983 Vigna mungo HOM05D004873 ORTHO05D006122 4.1e-150 536.6 1001 52.5
Gohir.A03G140300 Gossypium hirsutum HOM05D004873 ORTHO05D006122 4.5e-149 533.1 797 56.0
Psat2g106600 Pisum sativum HOM05D004873 ORTHO05D006122 1.9e-147 527.7 785 56.6
Sc11g0001220 Simmondsia chinensis HOM05D004873 ORTHO05D006122 1.9e-147 527.7 769 58.6
Phvul.002G071900 Phaseolus vulgaris HOM05D004873 ORTHO05D006122 6.1e-146 522.7 789 57.8
AUR62005371 Chenopodium quinoa HOM05D004873 ORTHO05D006122 4.0e-145 520.0 819 50.9
CsaV3_5G031610 Cucumis sativus L. HOM05D004873 ORTHO05D006122 5.2e-145 519.6 781 56.9
Lsat_1_v5_gn_4_6981 Lactuca sativa HOM05D004873 ORTHO05D006122 5.2e-145 519.6 939 51.4
ECA199G0004 Erigeron canadensis HOM05D004873 ORTHO05D006122 3.4e-144 516.9 940 52.3
Nitab4.5_0000113g0270 Nicotiana tabacum HOM05D004873 ORTHO05D006122 1.7e-143 514.6 1004 43.7
PGR102G2017 Punica granatum HOM05D004873 ORTHO05D006122 3.5e-141 506.9 896 53.0
HanXRQChr12g0383471 Helianthus annuus HOM05D004873 ORTHO05D006122 3.9e-140 503.4 859 55.3
MSTRG.7893 Avicennia marina HOM05D004873 ORTHO05D006122 1.5e-139 501.5 765 52.4
Lalb_Chr05g0228131 Lupinus albus HOM05D004873 ORTHO05D006122 4.3e-139 500.0 774 57.2
Lj2g0008447 Lotus japonicus HOM05D004873 ORTHO05D006122 7.3e-139 499.2 799 54.7
HPP92_019185 Vanilla planifolia HOM05D004873 ORTHO05D006122 1.8e-137 494.6 985 45.7
SEGI_30430 Sequoiadendron giganteum HOM05D004873 ORTHO05D006122 5.2e-137 493.0 790 59.2
Thecc.02G248000 Theobroma cacao HOM05D004873 ORTHO05D006122 2.0e-136 491.1 922 50.9
Glyma.02G034300 Glycine max HOM05D004873 ORTHO05D006122 3.2e-134 483.8 800 51.6
Carub.0002s0504 Capsella rubella HOM05D004873 ORTHO05D006122 2.8e-130 470.7 841 52.2
AUR62014033 Chenopodium quinoa HOM05D004873 ORTHO05D006122 2.8e-130 470.7 819 51.4
AL2G16455 Arabidopsis lyrata HOM05D004873 ORTHO05D006122 4.7e-130 469.9 849 53.0
EL10Ac6g13668 Beta vulgaris HOM05D004873 ORTHO05D006122 8.9e-129 465.7 799 55.2
Hund05991 Selenicereus undatus HOM05D004873 ORTHO05D006122 3.4e-128 463.8 854 56.8
Thhalv10023242m.g Eutrema salsugineum HOM05D004873 ORTHO05D006122 7.5e-128 462.6 850 55.2
unitig_27.g25195 Utricularia gibba HOM05D004873 ORTHO05D006122 7.1e-126 456.1 836 49.4
Aa31LG2G10110 Aethionema arabicum HOM05D004873 ORTHO05D006122 2.7e-125 454.1 1027 50.3
BcaC06g31808 Brassica carinata HOM05D004873 ORTHO05D006122 1.7e-124 451.4 868 51.8
Sp2g04470 Schrenkiella parvula HOM05D004873 ORTHO05D006122 6.6e-124 449.5 936 49.9
C01p36930 Brassica napus HOM05D004873 ORTHO05D006122 4.3e-123 446.8 845 49.5
BraA01t02979Z Brassica rapa HOM05D004873 ORTHO05D006122 1.6e-122 444.9 840 50.1
THA.LOC104819514 Tarenaya hassleriana HOM05D004873 ORTHO05D006122 1.6e-122 444.9 860 49.7
BolC1t03651H Brassica oleracea HOM05D004873 ORTHO05D006122 2.1e-122 444.5 854 48.9
THA.LOC104819547 Tarenaya hassleriana HOM05D004873 ORTHO05D006122 2.1e-122 444.5 882 48.6
CARHR052750 Cardamine hirsuta HOM05D004873 ORTHO05D006122 1.5e-120 438.3 797 51.7
A01p29150 Brassica napus HOM05D004873 ORTHO05D006122 4.4e-120 436.8 840 49.6
AT1G60200 Arabidopsis thaliana HOM05D004873 ORTHO05D006122 1.9e-118 431.4 779 55.8
Lalb_Chr05g0216921 Lupinus albus HOM05D004873 ORTHO05D006122 2.4e-118 431.0 736 47.4
BcaC09g49418 Brassica carinata HOM05D004873 ORTHO05D006122 4.6e-117 426.8 830 48.6
C04p26690 Brassica napus HOM05D004873 ORTHO05D006122 3.0e-116 424.1 831 48.7
BolC4t24137H Brassica oleracea HOM05D004873 ORTHO05D006122 3.0e-116 424.1 831 48.7
BcaB04g20256 Brassica carinata HOM05D004873 ORTHO05D006122 5.1e-116 423.3 832 51.2
Actinidia08168 Actinidia chinensis HOM05D004873 ORTHO05D006122 3.3e-115 420.6 626 61.5
BcaC02g10690 Brassica carinata HOM05D004873 ORTHO05D006122 1.5e-112 411.8 867 46.8
Zm00001eb042420 Zea mays HOM05D004873 ORTHO05D006122 5.8e-112 409.8 793 48.0
Pp3c25_3310 Physcomitrium patens HOM05D004873 ORTHO05D006122 2.0e-104 384.8 904 48.1
Ah.03g132650 Amaranthus hybridus HOM05D004873 ORTHO05D006122 2.5e-99 367.9 1019 42.9
Zm00001eb179020 Zea mays HOM05D004873 ORTHO05D006122 3.3e-99 367.5 786 51.0
Pp3c16_19090 Physcomitrium patens HOM05D004873 ORTHO05D006122 2.6e-96 357.8 837 48.5
Mapoly0148s0032 Marchantia polymorpha HOM05D004873 ORTHO05D006122 6.7e-92 343.2 851 48.2
Oeu056734.1 Olea europaea HOM05D004873 ORTHO05D006122 1.6e-90 338.6 847 41.6
PSO675G2898 Papaver somniferum HOM05D004873 ORTHO05D006122 2.5e-86 324.7 454 51.1
Nitab4.5_0010954g0010 Nicotiana tabacum HOM05D004873 ORTHO05D006122 4.8e-82 310.5 275 62.5
Solyc05g005620.4 Solanum lycopersicum HOM05D004873 ORTHO05D006122 7.2e-78 296.6 324 58.0
C05p51270 Brassica napus HOM05D004873 ORTHO05D006122 5.1e-76 290.4 321 61.1
CDE01G0278 Ceratophyllum demersum HOM05D004873 ORTHO05D006122 1.9e-75 288.5 389 56.6
CDE02G2726 Ceratophyllum demersum HOM05D004873 ORTHO05D006122 3.4e-72 277.7 255 65.5
FvH4_4g34570 Fragaria vesca HOM05D004873 ORTHO05D006122 1.5e-67 262.3 265 61.9
FAN12G0889 Fragaria x ananassa HOM05D004873 ORTHO05D006122 1.1e-65 256.1 231 64.9
CDE01G0488 Ceratophyllum demersum HOM05D004873 ORTHO05D006122 6.1e-61 240.4 222 69.4
SMO117G0118 Selaginella moellendorffii HOM05D004873 ORTHO05D006122 1.7e-58 232.3 849 38.0
Os08g0416400 Oryza sativa ssp. japonica HOM05D004873 ORTHO05D006122 1.1e-54 219.5 354 46.0
CBR_g45271 Chara braunii HOM05D000019 ORTHO05D000002 2.1e-45 188.7 291 49.5
CDE02G2297 Ceratophyllum demersum HOM05D001801 ORTHO05D001739 1.2e-40 172.9 160 61.2
SHI27198 Sapria himalayana HOM05D004873 ORTHO05D006122 1.7e-39 169.1 130 67.7
Aqoxy1G03520 Aquilegia oxysepala HOM05D004873 ORTHO05D006122 6.8e-28 130.6 71 91.5
MCO16G428 Micromonas commoda HOM05D004873 ORTHO05D006122 1.7e-23 115.9 132 50.0
Medtr5g034435 Medicago truncatula HOM05D004873 ORTHO05D006122 1.5e-22 112.8 72 77.8
Cre08.g375084 Chlamydomonas reinhardtii HOM05D004873 ORTHO05D006122 6.4e-18 97.4 172 40.7
Actinidia27784 Actinidia chinensis HOM05D004873 ORTHO05D026408 3.5e-16 91.7 178 38.8
Lsat_1_v5_gn_5_2020 Lactuca sativa HOM05D004873 ORTHO05D026408 1.5e-14 86.3 148 39.9
PRCOL_00005912 Prasinoderma coloniale HOM05D004873 ORTHO05D006122 5.6e-14 84.3 91 44.0
SMO119G0006 Selaginella moellendorffii HOM05D004873 ORTHO05D006122 5.6e-14 84.3 92 54.3
PSO339G1217 Papaver somniferum HOM05D004873 ORTHO05D006122 7.3e-14 84.0 115 41.7
PSO017G6017 Papaver somniferum HOM05D004873 ORTHO05D006122 1.6e-13 82.8 144 36.1
Lsat_1_v5_gn_6_33360 Lactuca sativa HOM05D004873 ORTHO05D026408 2.3e-12 79.0 203 34.5
MD16G1091800 Malus domestica HOM05D057391 ORTHO05D036519 2.3e-07 62.4 151 39.1
SMO351G0499 Selaginella moellendorffii HOM05D004873 ORTHO05D006122 1.5e-06 59.7 92 46.7
PSO339G4348 Papaver somniferum HOM05D031134 ORTHO05D302392 2.5e-06 58.9 213 28.2
PSO339G1828 Papaver somniferum HOM05D031134 ORTHO05D301998 3.3e-06 58.5 213 28.2
PSO339G2267 Papaver somniferum HOM05D004266 ORTHO05D005151 3.3e-06 58.5 94 29.8
PSO339G5784 Papaver somniferum HOM05D004266 ORTHO05D005151 3.3e-06 58.5 94 29.8
PSO339G5906 Papaver somniferum HOM05D031134 ORTHO05D302295 3.3e-06 58.5 213 28.2


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