Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR371G1150 Trochodendron aralioides HOM05D004291 ORTHO05D005620 4.3e-62 241.1 120 100.0
arahy.Tifrunner.gnm1.ann1.4JQ3QL Arachis hypogaea HOM05D004291 ORTHO05D005620 9.1e-44 180.3 106 87.7
arahy.Tifrunner.gnm1.ann1.5E6QYU Arachis hypogaea HOM05D004291 ORTHO05D005620 9.1e-44 180.3 106 87.7
arahy.Tifrunner.gnm1.ann1.81GM5H Arachis hypogaea HOM05D004291 ORTHO05D005620 9.1e-44 180.3 106 87.7
arahy.Tifrunner.gnm1.ann1.86CJ1T Arachis hypogaea HOM05D004291 ORTHO05D005620 9.1e-44 180.3 106 87.7
arahy.Tifrunner.gnm1.ann1.8KX3ZR Arachis hypogaea HOM05D004291 ORTHO05D005620 9.1e-44 180.3 106 87.7
arahy.Tifrunner.gnm1.ann1.C5IA5B Arachis hypogaea HOM05D004291 ORTHO05D005620 9.1e-44 180.3 106 87.7
arahy.Tifrunner.gnm1.ann1.E3XYYX Arachis hypogaea HOM05D004291 ORTHO05D005620 9.1e-44 180.3 106 87.7
arahy.Tifrunner.gnm1.ann1.I3FVC7 Arachis hypogaea HOM05D004291 ORTHO05D005620 9.1e-44 180.3 106 87.7
arahy.Tifrunner.gnm1.ann1.JQU8UC Arachis hypogaea HOM05D004291 ORTHO05D005620 9.1e-44 180.3 106 87.7
arahy.Tifrunner.gnm1.ann1.K8XT55 Arachis hypogaea HOM05D004291 ORTHO05D005620 9.1e-44 180.3 106 87.7
arahy.Tifrunner.gnm1.ann1.NTK3LG Arachis hypogaea HOM05D004291 ORTHO05D005620 9.1e-44 180.3 106 87.7
Ca_03780_v3 Cicer arietinum L. HOM05D004291 ORTHO05D005620 9.1e-44 180.3 106 87.7
Eucgr.I01856 Eucalyptus grandis HOM05D004291 ORTHO05D005620 9.1e-44 180.3 106 87.7
Gorai.001G161700 Gossypium raimondii HOM05D004291 ORTHO05D005620 9.1e-44 180.3 106 87.7
Lj5g0026615 Lotus japonicus HOM05D004291 ORTHO05D005620 1.5e-43 179.5 106 86.8
LjContig00315g0005262 Lotus japonicus HOM05D004291 ORTHO05D005620 1.5e-43 179.5 106 86.8
LjContig00315g0005528 Lotus japonicus HOM05D004291 ORTHO05D005620 1.5e-43 179.5 106 86.8
Cfa021332 Carpinus fangiana HOM05D004291 ORTHO05D005620 2.6e-43 178.7 106 86.8
Lalb_Chr00c21g0405651 Lupinus albus HOM05D004291 ORTHO05D005620 2.6e-43 178.7 106 86.8
Lalb_Chr00c24g0407111 Lupinus albus HOM05D004291 ORTHO05D005620 2.6e-43 178.7 106 86.8
Psat3g172200 Pisum sativum HOM05D004291 ORTHO05D005620 2.6e-43 178.7 106 86.8
RcHm_v2.0_MTg0498571 Rosa chinensis HOM05D004291 ORTHO05D005620 2.6e-43 178.7 106 86.8
TPR.G581 Trifolium pratense HOM05D004291 ORTHO05D005620 4.5e-43 177.9 106 86.8
Nn1g09987 Nelumbo nucifera HOM05D004291 ORTHO05D005620 7.7e-43 177.2 106 87.7
RhsimMtG0001900 Rhododendron simsii HOM05D004291 ORTHO05D005620 1.0e-42 176.8 106 85.8
Ca_31296_v3 Cicer arietinum L. HOM05D004291 ORTHO05D005620 1.3e-42 176.4 106 86.8
Hma1.2p1_0716F.1_g208050 Hydrangea macrophylla HOM05D004291 ORTHO05D005620 1.3e-42 176.4 106 86.8
RcHm_v2.0_MTg0498241 Rosa chinensis HOM05D004291 ORTHO05D005620 1.1e-41 173.3 106 84.9
Sed0009617 Sechium edule HOM05D004291 ORTHO05D005620 3.2e-41 171.8 106 84.9
DCAR_032452 Daucus carota HOM05D004291 ORTHO05D005620 5.5e-41 171.0 106 84.0
CsaV3_5G015800 Cucumis sativus L. HOM05D004291 ORTHO05D005620 1.2e-40 169.9 106 84.0
ATMG00160 Arabidopsis thaliana HOM05D004291 ORTHO05D005620 2.7e-40 168.7 106 83.0
CARHR282690 Cardamine hirsuta HOM05D004291 ORTHO05D005620 2.7e-40 168.7 106 83.0
A04p09440 Brassica napus HOM05D004291 ORTHO05D005620 1.0e-39 166.8 106 82.1
A04p09530 Brassica napus HOM05D004291 ORTHO05D005620 1.0e-39 166.8 106 82.1
BolSC28t60319H Brassica oleracea HOM05D004291 ORTHO05D005620 1.0e-39 166.8 106 82.1
BolSC28t60374H Brassica oleracea HOM05D004291 ORTHO05D005620 1.0e-39 166.8 106 82.1
BraSC48t46334Z Brassica rapa HOM05D004291 ORTHO05D005620 1.0e-39 166.8 106 82.1
BraSC54t46353Z Brassica rapa HOM05D004291 ORTHO05D005620 1.0e-39 166.8 106 82.1
BraSC54t46371Z Brassica rapa HOM05D004291 ORTHO05D005620 1.0e-39 166.8 106 82.1
BraSC54t46377Z Brassica rapa HOM05D004291 ORTHO05D005620 1.0e-39 166.8 106 82.1
Thhalv10023011m.g Eutrema salsugineum HOM05D004291 ORTHO05D005620 1.0e-39 166.8 106 81.1
CANSAT16G0053 Cannabis sativa HOM05D004291 ORTHO05D005620 1.4e-39 166.4 106 83.0
Migut.J01259 Erythranthe guttata HOM05D004291 ORTHO05D005620 1.4e-39 166.4 106 83.0
SGA_v2.0_scaffold245G44781 Striga asiatica HOM05D004291 ORTHO05D005620 3.9e-39 164.9 106 83.0
GSVIVG01006909001 Vitis vinifera HOM05D004291 ORTHO05D005620 5.1e-39 164.5 109 80.7
CAN.G1173.2 Capsicum annuum HOM05D004291 ORTHO05D005620 6.7e-39 164.1 108 83.3
BraSC48t46243Z Brassica rapa HOM05D004291 ORTHO05D005620 2.0e-38 162.5 107 81.3
Potri.007G061781 Populus trichocarpa HOM05D004291 ORTHO05D005620 2.2e-37 159.1 106 78.3
SabraMtG0008700 Salix brachista HOM05D004291 ORTHO05D005620 2.2e-37 159.1 106 78.3
Nn1g09999 Nelumbo nucifera HOM05D004291 ORTHO05D005620 6.3e-37 157.5 107 80.4
Nn1g10072 Nelumbo nucifera HOM05D004291 ORTHO05D005620 6.3e-37 157.5 107 80.4
Glyma.09G040100 Glycine max HOM05D004291 ORTHO05D005620 1.4e-36 156.4 106 76.4
Medtr0212s0040 Medicago truncatula HOM05D000743 ORTHO05D000580 2.9e-34 148.7 106 78.3
HanXRQMTg0579681 Helianthus annuus HOM05D004291 ORTHO05D005620 5.0e-34 147.9 160 56.2
Ah.10g028620 Amaranthus hybridus HOM05D004291 ORTHO05D005620 6.5e-34 147.5 155 57.4
Ah.10g028820 Amaranthus hybridus HOM05D004291 ORTHO05D005620 6.5e-34 147.5 155 57.4
Phvul.009G252600 Phaseolus vulgaris HOM05D004291 ORTHO05D005620 6.5e-34 147.5 106 72.6
VMungo1309G0827 Vigna mungo HOM05D004291 ORTHO05D005620 3.2e-33 145.2 106 72.6
AL8G12400 Arabidopsis lyrata HOM05D004291 ORTHO05D005620 1.7e-29 132.9 88 83.0
Sed0021216 Sechium edule HOM05D004291 ORTHO05D005620 7.7e-27 124.0 76 86.8
Cpa.g.sc555.1 Carica papaya HOM05D004291 ORTHO05D005620 2.5e-25 119.0 83 78.3
Lalb_Chr23g0276811 Lupinus albus HOM05D004291 ORTHO05D005620 1.2e-24 116.7 71 88.7
Solyc00g500101.1 Solanum lycopersicum HOM05D004291 ORTHO05D005620 2.1e-24 115.9 73 82.2
Solyc00g500118.1 Solanum lycopersicum HOM05D004291 ORTHO05D005620 2.1e-24 115.9 73 82.2
Solyc00g500244.1 Solanum lycopersicum HOM05D004291 ORTHO05D005620 2.1e-24 115.9 73 82.2
Solyc00g500275.1 Solanum lycopersicum HOM05D004291 ORTHO05D005620 2.1e-24 115.9 73 82.2
Solyc00g500310.1 Solanum lycopersicum HOM05D004291 ORTHO05D005620 2.1e-24 115.9 73 82.2
Solyc00g500359.1 Solanum lycopersicum HOM05D004291 ORTHO05D005620 2.1e-24 115.9 73 82.2
Lsat_1_v5_gn_4_50261 Lactuca sativa HOM05D004291 ORTHO05D005620 4.7e-24 114.8 73 80.8
HanXRQChr04g0112911 Helianthus annuus HOM05D004291 ORTHO05D005620 6.1e-24 114.4 73 80.8
AUR62042349 Chenopodium quinoa HOM05D004291 ORTHO05D005620 8.0e-24 114.0 73 80.8
Sopen00g002770 Solanum pennellii HOM05D004291 ORTHO05D005620 8.0e-24 114.0 69 85.5
AUR62001626 Chenopodium quinoa HOM05D004291 ORTHO05D005620 1.2e-22 110.2 73 78.1
Lsat_1_v5_gn_6_95140 Lactuca sativa HOM05D004291 ORTHO05D005620 2.2e-21 105.9 73 75.3
Thecc.10G006300 Theobroma cacao HOM05D004291 ORTHO05D005620 2.7e-19 99.0 68 75.0
Os04g0343050 Oryza sativa ssp. japonica HOM05D004291 ORTHO05D005620 5.9e-19 97.8 69 73.9
CAN.G390.18 Capsicum annuum HOM05D004291 ORTHO05D005620 2.2e-18 95.9 60 85.0
Psat1g132320 Pisum sativum HOM05D004291 ORTHO05D007972 1.9e-17 92.8 77 64.9
arahy.Tifrunner.gnm1.ann1.8LYJ6L Arachis hypogaea HOM05D004291 ORTHO05D005620 1.6e-16 89.7 61 73.8
arahy.Tifrunner.gnm1.ann1.Y9PUBE Arachis hypogaea HOM05D004291 ORTHO05D005620 1.6e-16 89.7 61 73.8
Sed0022989 Sechium edule HOM05D004291 ORTHO05D005620 8.0e-16 87.4 55 83.6
Dinv06711 Davidia involucrata HOM05D004291 ORTHO05D005620 1.2e-14 83.6 117 49.6
Solyc05g045850.3 Solanum lycopersicum HOM05D004291 ORTHO05D005620 1.5e-14 83.2 65 72.3
ATR0461G001 Amborella trichopoda HOM05D004291 ORTHO05D005620 5.7e-14 81.3 55 80.0
Solyc12g038985.1 Solanum lycopersicum HOM05D001987 ORTHO05D006514 5.7e-14 81.3 55 76.4
unitig_87.g27941 Utricularia gibba HOM05D004291 ORTHO05D005620 1.3e-13 80.1 56 75.0
Solyc05g045930.1 Solanum lycopersicum HOM05D004291 ORTHO05D005620 3.7e-13 78.6 54 79.6
Sabra01G0004500 Salix brachista HOM05D000521 ORTHO05D006286 6.3e-13 77.8 55 67.3
AT2G07695 Arabidopsis thaliana HOM05D004291 ORTHO05D005620 3.1e-12 75.5 48 77.1
ATMG01280 Arabidopsis thaliana HOM05D004291 ORTHO05D005620 3.1e-12 75.5 48 77.1
CARHR283480 Cardamine hirsuta HOM05D004291 ORTHO05D005620 3.1e-12 75.5 48 77.1
Nn1g09996 Nelumbo nucifera HOM05D004291 ORTHO05D005620 2.0e-11 72.8 36 94.4
Nn1g10097 Nelumbo nucifera HOM05D004291 ORTHO05D005620 2.0e-11 72.8 36 94.4
Solyc03g063780.1 Solanum lycopersicum HOM05D004291 ORTHO05D005620 5.9e-11 71.2 54 75.9
VMungo1309G2873 Vigna mungo HOM05D000045 ORTHO05D001346 1.5e-09 66.6 101 46.5
SGA_v2.0_scaffold420G51405 Striga asiatica HOM05D004291 ORTHO05D005620 9.5e-09 63.9 47 68.1
Solyc02g021365.1 Solanum lycopersicum HOM05D004291 ORTHO05D005620 1.2e-08 63.5 59 59.3
CAN.G687.3 Capsicum annuum HOM05D004291 ORTHO05D005620 1.6e-08 63.2 48 77.1
SHI33022 Sapria himalayana HOM05D004291 ORTHO05D005620 1.6e-08 63.2 48 70.8
PGSC0003DMG401031302 Solanum tuberosum HOM05D004291 ORTHO05D005620 1.6e-08 63.2 33 90.9
SHI09335 Sapria himalayana HOM05D004291 ORTHO05D005620 8.0e-08 60.8 35 82.9
PGSC0003DMG400013864 Solanum tuberosum HOM05D004291 ORTHO05D005620 8.0e-08 60.8 33 87.9
TAR022G0001 Trochodendron aralioides HOM05D004291 ORTHO05D005620 1.8e-07 59.7 54 55.6
Cre03.g154350 Chlamydomonas reinhardtii HOM05D004291 ORTHO05D005620 8.9e-07 57.4 79 38.0
Mapoly0007s0023 Marchantia polymorpha HOM05D004291 ORTHO05D005620 2.0e-06 56.2 49 59.2
MBI05_g05354_MAGBIO Magnolia biondii HOM05D004291 ORTHO05D005620 3.4e-06 55.5 38 81.6
SHI06816 Sapria himalayana HOM05D004291 ORTHO05D005620 5.7e-06 54.7 46 69.6


User provided reference genes

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