Gene: BraSC54t46353Z
General Information
Structural Information
- Species Brassica rapa
- Gene Identifier BraSC54t46353Z
- Transcript Identifier BraSC54t46353Z
- Gene Type Coding gene
- Location Brapa_scaffold_54 : 112393-113088 : positive
Gene Family Information
- ID HOM05D004291
- #Genes/#Species 166/60
- Phylogenetic origin
- ID ORTHO05D005620
- #Genes/#Species 155/61
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- uniprot A0A3P6D9X7
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009060 | ISO | PLAZA Integrative Orthology | aerobic respiration | ATMG01280 |
| GO:0022904 | ISO | PLAZA Integrative Orthology | respiratory electron transport chain | ATMG00160 |
| GO:0022900 | IEA | GOA Database | electron transport chain | |
| GO:0022900 | IEA | InterPro | electron transport chain | |
| GO:1902600 | IEA | GOA Database | proton transmembrane transport |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005507 | IEA | GOA Database | copper ion binding | |
| GO:0005507 | IEA | InterPro | copper ion binding | |
| GO:0016491 | IEA | GOA Database | oxidoreductase activity | |
| GO:0016491 | IEA | InterPro | oxidoreductase activity | |
| GO:0004129 | IEA | GOA Database | cytochrome-c oxidase activity | |
| GO:0004129 | IEA | InterPro | cytochrome-c oxidase activity | |
| GO:0046872 | IEA | GOA Database | metal ion binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005751 | ISO | PLAZA Integrative Orthology | mitochondrial respiratory chain complex IV | ATMG01280 |
| GO:0016020 | IEA | GOA Database | membrane | |
| GO:0016020 | IEA | InterPro | membrane | |
| GO:0016021 | IEA | GOA Database | integral component of membrane | |
| GO:0016021 | IEA | InterPro | integral component of membrane | |
| GO:0005739 | IEA | GOA Database | mitochondrion | |
| GO:0070469 | IEA | GOA Database | respirasome | |
| GO:0005743 | IEA | GOA Database | mitochondrial inner membrane |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR011759 | Cytochrome C oxidase subunit II, transmembrane domain |
| IPR002429 | Cytochrome c oxidase subunit II-like C-terminal |
| IPR036257 | Cytochrome C oxidase subunit II, transmembrane domain superfamily |
| IPR014222 | Cytochrome c oxidase, subunit II |
| IPR034210 | Cytochrome c oxidase subunit 2, C-terminal |
| IPR008972 | Cupredoxin |
| Mapman id | Description |
|---|---|
| 2.4.5.1.2 | Cellular respiration.oxidative phosphorylation.cytochrome c oxidase complex.core components.component COX2 |