Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR367G0002 Trochodendron aralioides HOM05D005745 ORTHO05D006857 1.6e-255 885.6 442 100.0
Nn6g33496 Nelumbo nucifera HOM05D005745 ORTHO05D006857 3.4e-165 585.5 432 68.5
Hma1.2p1_0001F.1_g001520 Hydrangea macrophylla HOM05D005745 ORTHO05D006857 7.4e-160 567.8 416 68.0
Actinidia10034 Actinidia chinensis HOM05D005745 ORTHO05D006857 1.1e-158 563.9 433 67.0
GSVIVG01026870001 Vitis vinifera HOM05D005745 ORTHO05D006857 3.1e-158 562.4 453 66.0
Dinv43791 Davidia involucrata HOM05D005745 ORTHO05D006857 1.5e-157 560.1 431 67.5
Actinidia20926 Actinidia chinensis HOM05D005745 ORTHO05D006857 2.6e-157 559.3 429 66.4
QL08p049437 Quercus lobata HOM05D005745 ORTHO05D006857 2.5e-155 552.7 419 67.5
CSS0024424 Camellia sinensis var. sinensis HOM05D005745 ORTHO05D006857 2.1e-154 549.7 433 67.0
CSS0038489 Camellia sinensis var. sinensis HOM05D005745 ORTHO05D006857 2.3e-153 546.2 433 66.5
Manes.01G259400 Manihot esculenta HOM05D005745 ORTHO05D006857 2.0e-149 533.1 424 63.7
vmacro13297 Vaccinium macrocarpon HOM05D005745 ORTHO05D006857 7.2e-147 524.6 440 63.9
Aqoxy7G00357 Aquilegia oxysepala HOM05D005745 ORTHO05D006857 8.0e-146 521.2 415 64.3
CiPaw.02G029400 Carya illinoinensis HOM05D005745 ORTHO05D006857 2.0e-144 516.5 416 64.4
Lsat_1_v5_gn_7_5060 Lactuca sativa HOM05D005745 ORTHO05D006857 2.6e-144 516.2 417 64.7
PSO478G4474 Papaver somniferum HOM05D005745 ORTHO05D006857 4.4e-144 515.4 442 61.8
CANSAT56G0536 Cannabis sativa HOM05D005745 ORTHO05D006857 8.3e-143 511.1 433 62.4
PSO782G5186 Papaver somniferum HOM05D005745 ORTHO05D006857 1.8e-142 510.0 439 60.8
TWI23G0914 Tripterygium wilfordii HOM05D005745 ORTHO05D006857 9.1e-142 507.7 459 59.0
MD01G1055100 Malus domestica HOM05D005745 ORTHO05D006857 1.2e-141 507.3 430 62.6
FAN06G1549 Fragaria x ananassa HOM05D005745 ORTHO05D006857 1.6e-141 506.9 430 62.1
FAN10G4182 Fragaria x ananassa HOM05D005745 ORTHO05D006857 3.5e-141 505.8 423 61.9
ECA236G3051 Erigeron canadensis HOM05D005745 ORTHO05D006857 4.5e-141 505.4 417 62.8
Sopen05g028140 Solanum pennellii HOM05D005745 ORTHO05D006857 1.3e-140 503.8 419 62.3
Rhsim07G0017300 Rhododendron simsii HOM05D000683 ORTHO05D000507 2.9e-140 502.7 428 63.8
DCAR_015932 Daucus carota HOM05D005745 ORTHO05D006857 5.0e-140 501.9 433 60.5
Cpa.g.sc18.234 Carica papaya HOM05D005745 ORTHO05D006857 1.9e-139 500.0 433 61.4
Solyc05g048810.4 Solanum lycopersicum HOM05D005745 ORTHO05D006857 7.2e-139 498.0 419 62.1
Ciclev10020429m.g Citrus clementina HOM05D005745 ORTHO05D006857 9.4e-139 497.7 408 64.5
Lj7C516G5 Lonicera japonica HOM05D005745 ORTHO05D006857 8.0e-138 494.6 376 67.6
Sabra14G0059300 Salix brachista HOM05D005745 ORTHO05D006857 1.0e-137 494.2 425 60.2
VMungo0331G1900 Vigna mungo HOM05D005745 ORTHO05D006857 2.6e-136 489.6 424 60.6
Cfa003949 Carpinus fangiana HOM05D000683 ORTHO05D000507 4.4e-136 488.8 385 65.7
PGSC0003DMG400021653 Solanum tuberosum HOM05D005745 ORTHO05D006857 1.1e-134 484.2 419 60.4
Lj3g0021692 Lotus japonicus HOM05D005745 ORTHO05D006857 7.0e-134 481.5 426 60.8
CiPaw.02G029100 Carya illinoinensis HOM05D005745 ORTHO05D006857 1.6e-133 480.3 416 61.3
Lalb_Chr04g0256771 Lupinus albus HOM05D005745 ORTHO05D006857 1.6e-133 480.3 428 59.8
MSTRG.17255 Avicennia marina HOM05D005745 ORTHO05D006857 2.0e-133 479.9 423 59.1
CAN.G1535.1 Capsicum annuum HOM05D005745 ORTHO05D006857 5.9e-133 478.4 417 59.2
Gohir.D12G109300 Gossypium hirsutum HOM05D005745 ORTHO05D006857 1.3e-132 477.2 417 59.7
arahy.Tifrunner.gnm1.ann1.5YG8M2 Arachis hypogaea HOM05D005745 ORTHO05D006857 1.7e-132 476.9 435 58.4
EL10Ac1g00543 Beta vulgaris HOM05D005745 ORTHO05D006857 1.7e-132 476.9 417 59.5
SGA_v2.0_scaffold277G46666 Striga asiatica HOM05D005745 ORTHO05D006857 3.8e-132 475.7 419 59.7
PGR042G0923 Punica granatum HOM05D005745 ORTHO05D006857 5.0e-132 475.3 422 61.4
MBI17_g21972_MAGBIO Magnolia biondii HOM05D005745 ORTHO05D006857 1.1e-131 474.2 375 65.6
Gorai.008G118400 Gossypium raimondii HOM05D005745 ORTHO05D006857 1.5e-131 473.8 420 59.8
arahy.Tifrunner.gnm1.ann1.JLYP5G Arachis hypogaea HOM05D005745 ORTHO05D006857 1.9e-131 473.4 421 59.1
Cc02_g37770 Coffea canephora HOM05D005745 ORTHO05D006857 2.5e-131 473.0 420 59.0
Medtr8g031440 Medicago truncatula HOM05D005745 ORTHO05D006857 2.5e-131 473.0 413 59.1
Oeu056358.1 Olea europaea HOM05D005745 ORTHO05D006857 4.2e-131 472.2 384 64.3
Nitab4.5_0007346g0010 Nicotiana tabacum HOM05D005745 ORTHO05D006857 5.5e-131 471.9 431 58.7
Sc26g0000960 Simmondsia chinensis HOM05D005745 ORTHO05D006857 5.5e-131 471.9 419 59.9
Peaxi162Scf00191g01322 Petunia axillaris HOM05D005745 ORTHO05D006857 1.2e-130 470.7 414 60.1
AUR62033312 Chenopodium quinoa HOM05D005745 ORTHO05D006857 2.1e-130 469.9 416 59.4
CsaV3_6G000430 Cucumis sativus L. HOM05D005745 ORTHO05D006857 2.8e-130 469.5 415 58.1
Haze_15472 Corylus avellana HOM05D005745 ORTHO05D006857 3.6e-130 469.2 413 61.3
Gohir.A12G105400 Gossypium hirsutum HOM05D005745 ORTHO05D006857 3.6e-130 469.2 415 59.0
AUR62033347 Chenopodium quinoa HOM05D005745 ORTHO05D006857 3.0e-129 466.1 419 58.5
Eucgr.E00173 Eucalyptus grandis HOM05D005745 ORTHO05D006857 8.3e-127 458.0 419 57.5
Hund27291 Selenicereus undatus HOM05D005745 ORTHO05D006857 1.8e-126 456.8 432 57.2
Eucgr.E00169 Eucalyptus grandis HOM05D005745 ORTHO05D006857 3.2e-126 456.1 419 57.3
HanXRQChr04g0121611 Helianthus annuus HOM05D005745 ORTHO05D006857 3.9e-124 449.1 357 65.5
AL1G10580 Arabidopsis lyrata HOM05D005745 ORTHO05D006857 5.0e-124 448.7 430 55.6
BcaB03g13612 Brassica carinata HOM05D005745 ORTHO05D006857 1.9e-123 446.8 416 57.7
Duzib138G1514 Durio zibethinus HOM05D005745 ORTHO05D006857 9.5e-123 444.5 360 63.9
Lalb_Chr10g0097191 Lupinus albus HOM05D005745 ORTHO05D006857 9.5e-123 444.5 428 54.7
CARHR000560 Cardamine hirsuta HOM05D005745 ORTHO05D006857 1.2e-122 444.1 420 55.0
Thhalv10007725m.g Eutrema salsugineum HOM05D005745 ORTHO05D006857 2.1e-122 443.4 417 56.1
A10p00280 Brassica napus HOM05D005745 ORTHO05D006857 1.0e-121 441.0 419 56.6
ClCG06G003860 Citrullus lanatus HOM05D005745 ORTHO05D006857 2.3e-121 439.9 391 59.8
Aa31LG1G11130 Aethionema arabicum HOM05D005745 ORTHO05D006857 4.0e-121 439.1 454 52.2
BraA10t42305Z Brassica rapa HOM05D005745 ORTHO05D006857 1.3e-119 434.1 441 54.6
MBI18_g01486_MAGBIO Magnolia biondii HOM05D005745 ORTHO05D006857 2.9e-119 433.0 389 60.2
Potri.014G081400 Populus trichocarpa HOM05D005745 ORTHO05D006857 3.7e-119 432.6 360 61.7
Carub.0001s0045 Capsella rubella HOM05D005745 ORTHO05D006857 4.9e-119 432.2 419 54.9
Sp1g00540 Schrenkiella parvula HOM05D005745 ORTHO05D006857 4.9e-119 432.2 439 54.7
Ca_23656_v3 Cicer arietinum L. HOM05D005745 ORTHO05D006857 2.4e-118 429.9 376 59.6
AUR62004330 Chenopodium quinoa HOM05D005745 ORTHO05D006857 1.6e-117 427.2 422 55.2
AT1G01760 Arabidopsis thaliana HOM05D005745 ORTHO05D006857 2.7e-117 426.4 395 56.2
BolC5t28819H Brassica oleracea HOM05D005745 ORTHO05D006857 4.6e-117 425.6 427 55.3
THA.LOC104817020 Tarenaya hassleriana HOM05D005745 ORTHO05D006857 6.0e-117 425.2 389 57.1
FAN03G1898 Fragaria x ananassa HOM05D005745 ORTHO05D006857 7.8e-117 424.9 413 55.4
C05p00290 Brassica napus HOM05D005745 ORTHO05D006857 3.0e-116 422.9 444 52.3
Sed0009525 Sechium edule HOM05D005745 ORTHO05D006857 3.0e-116 422.9 363 62.5
CiPaw.02G029200 Carya illinoinensis HOM05D005745 ORTHO05D006857 3.4e-112 409.5 352 61.9
RcHm_v2.0_Chr1g0354081 Rosa chinensis HOM05D005745 ORTHO05D006857 2.9e-111 406.4 444 52.7
Ah.05g176680 Amaranthus hybridus HOM05D005745 ORTHO05D006857 8.3e-111 404.8 395 55.9
Prupe.2G164800 Prunus persica HOM05D005745 ORTHO05D006857 7.3e-107 391.7 336 62.8
Nitab4.5_0002262g0010 Nicotiana tabacum HOM05D005745 ORTHO05D006857 4.0e-105 386.0 420 52.9
Gohir.A12G105450 Gossypium hirsutum HOM05D005745 ORTHO05D006857 9.9e-104 381.3 355 57.5
FvH4_7g13861 Fragaria vesca HOM05D005745 ORTHO05D006857 7.1e-102 375.2 335 59.7
HPP92_001499 Vanilla planifolia HOM05D005745 ORTHO05D006857 2.1e-101 373.6 379 53.6
CDE06G1611 Ceratophyllum demersum HOM05D005745 ORTHO05D006857 2.4e-94 350.1 426 47.9
Zm00001eb067600 Zea mays HOM05D005745 ORTHO05D006857 3.2e-94 349.7 427 46.8
Glyma.07G073300 Glycine max HOM05D005745 ORTHO05D006857 2.5e-91 340.1 322 58.1
MELO3C021221.2 Cucumis melo HOM05D005745 ORTHO05D006857 5.8e-88 328.9 417 46.5
Psat4g154320 Pisum sativum HOM05D005745 ORTHO05D006857 4.6e-85 319.3 279 59.9
Mapoly0023s0060 Marchantia polymorpha HOM05D005745 ORTHO05D006857 3.0e-84 316.6 525 39.4
Phvul.010G096200 Phaseolus vulgaris HOM05D005745 ORTHO05D006857 4.8e-82 309.3 278 58.3
TPR.G39633 Trifolium pratense HOM05D005745 ORTHO05D006857 1.8e-81 307.4 220 68.6
FAN06G0933 Fragaria x ananassa HOM05D005745 ORTHO05D006857 9.0e-81 305.1 302 56.0
Atru.BG.56.p Acer truncatum HOM05D005745 ORTHO05D006857 1.9e-78 297.4 350 50.6
Pp3c4_14060 Physcomitrium patens HOM05D005745 ORTHO05D006857 4.3e-75 286.2 520 36.0
ATR0594G105 Amborella trichopoda HOM05D005745 ORTHO05D006857 9.3e-70 268.5 222 62.2
Os04g0683500 Oryza sativa ssp. japonica HOM05D005745 ORTHO05D006857 9.3e-70 268.5 313 49.2
Thecc.01G362500 Theobroma cacao HOM05D005745 ORTHO05D006857 1.0e-68 265.0 270 54.8
Prupe.2G165000 Prunus persica HOM05D005745 ORTHO05D006857 9.6e-67 258.5 424 41.3
AagrBONN_evm.TU.Sc2ySwM_362.160 Anthoceros agrestis HOM05D005745 ORTHO05D006857 6.2e-66 255.8 443 38.1
Zm00001eb420790 Zea mays HOM05D005745 ORTHO05D006857 5.3e-65 252.7 220 55.9
Glyma.03G013600 Glycine max HOM05D005745 ORTHO05D006857 5.8e-64 249.2 278 51.1
AUR62003100 Chenopodium quinoa HOM05D005745 ORTHO05D006857 5.0e-63 246.1 181 68.0
AUR62034353 Chenopodium quinoa HOM05D005745 ORTHO05D006857 8.4e-63 245.4 190 65.3
SHI13462 Sapria himalayana HOM05D005745 ORTHO05D006857 3.5e-61 240.0 425 39.5
MD07G1140200 Malus domestica HOM05D005745 ORTHO05D006857 6.9e-57 225.7 307 47.6
unitig_26.g9734 Utricularia gibba HOM05D005745 ORTHO05D006857 5.9e-56 222.6 349 41.5
Zm00001eb191880 Zea mays HOM05D009386 ORTHO05D006857 5.7e-51 206.1 235 48.1
Oeu056357.1 Olea europaea HOM05D005745 ORTHO05D006857 2.2e-50 204.1 154 66.2
TPR.G4413 Trifolium pratense HOM05D005745 ORTHO05D006857 1.3e-47 194.9 179 57.0
SEGI_32011 Sequoiadendron giganteum HOM05D005745 ORTHO05D006857 3.6e-45 186.8 194 49.0
SMO266G0032 Selaginella moellendorffii HOM05D005745 ORTHO05D006857 6.7e-44 182.6 301 38.2
MCO02G004 Micromonas commoda HOM05D005745 ORTHO05D006857 1.7e-34 151.4 456 31.1
Prupe.2G164500 Prunus persica HOM05D005745 ORTHO05D006857 1.4e-33 148.3 148 58.1
Atru.chr5.475 Acer truncatum HOM05D005745 ORTHO05D006857 3.1e-33 147.1 89 84.3
Zm00001eb442120 Zea mays HOM05D009386 ORTHO05D006857 5.3e-33 146.4 128 56.2
PRCOL_00000230 Prasinoderma coloniale HOM05D005745 ORTHO05D006857 9.1e-33 145.6 429 28.4
AUR62034238 Chenopodium quinoa HOM05D002177 ORTHO05D002257 1.6e-32 144.8 112 65.2
CBR_g12518 Chara braunii HOM05D004914 ORTHO05D006512 2.2e-31 141.0 821 23.1
SEGI_32349 Sequoiadendron giganteum HOM05D005745 ORTHO05D006857 2.9e-31 140.6 415 27.0
AUR62019766 Chenopodium quinoa HOM05D005745 ORTHO05D006857 6.5e-31 139.4 109 62.4
Glyma.03G013550 Glycine max HOM05D005745 ORTHO05D006857 3.2e-30 137.1 94 72.3
Oeu056356.1 Olea europaea HOM05D005745 ORTHO05D006857 1.2e-27 128.6 84 75.0
EL10Ac7g17708 Beta vulgaris HOM05D005745 ORTHO05D006857 9.8e-27 125.6 86 69.8
FAN01G0854 Fragaria x ananassa HOM05D005745 ORTHO05D006857 1.4e-25 121.7 173 42.2
COL.COLO4_12683 Corchorus olitorius HOM05D000683 ORTHO05D000507 1.6e-21 108.2 136 47.1
MCO15G493 Micromonas commoda HOM05D005745 ORTHO05D006857 1.3e-15 88.6 345 27.5
Cre14.g629283 Chlamydomonas reinhardtii HOM05D005745 ORTHO05D006857 2.3e-15 87.8 96 51.0
MCO14G396 Micromonas commoda HOM05D005745 ORTHO05D006857 2.3e-15 87.8 299 27.8
PRCOL_00001873 Prasinoderma coloniale HOM05D005745 ORTHO05D006857 4.7e-13 80.1 291 28.2
ATR0594G209 Amborella trichopoda HOM05D005745 ORTHO05D006857 9.5e-06 55.8 32 81.2


User provided reference genes

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