Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR365G0888 Trochodendron aralioides HOM05D000880 ORTHO05D007053 2.2e-94 349.0 177 100.0
GSVIVG01028027001 Vitis vinifera HOM05D000880 ORTHO05D007053 4.7e-49 198.4 134 75.4
vmacro02446 Vaccinium macrocarpon HOM05D000880 ORTHO05D007053 4.0e-48 195.3 161 62.7
Atru.chr5.1139 Acer truncatum HOM05D000880 ORTHO05D007053 1.5e-47 193.4 138 71.0
Actinidia01490 Actinidia chinensis HOM05D000880 ORTHO05D007053 1.5e-47 193.4 134 73.1
PSO384G2678 Papaver somniferum HOM05D000880 ORTHO05D007053 2.9e-46 189.1 128 77.3
PSO339G1812 Papaver somniferum HOM05D000880 ORTHO05D007053 3.8e-46 188.7 128 76.6
Rhsim13G0009800 Rhododendron simsii HOM05D000880 ORTHO05D007053 3.8e-46 188.7 138 69.6
TWI59G0706 Tripterygium wilfordii HOM05D000880 ORTHO05D007053 4.9e-46 188.3 138 69.6
Rhsim13G0043200 Rhododendron simsii HOM05D000880 ORTHO05D007053 8.4e-46 187.6 138 68.8
CDE01G0629 Ceratophyllum demersum HOM05D000880 ORTHO05D007053 1.9e-45 186.4 134 70.9
Gohir.D11G119200 Gossypium hirsutum HOM05D000880 ORTHO05D007053 4.2e-45 185.3 138 67.4
Gorai.007G127700 Gossypium raimondii HOM05D000880 ORTHO05D007053 4.2e-45 185.3 138 67.4
CAN.G472.10 Capsicum annuum HOM05D000880 ORTHO05D007053 7.1e-45 184.5 129 74.4
Dinv33058 Davidia involucrata HOM05D000880 ORTHO05D007053 1.6e-44 183.3 123 76.4
Eucgr.K03489 Eucalyptus grandis HOM05D000880 ORTHO05D007053 1.6e-44 183.3 134 70.9
Gohir.A11G114100 Gossypium hirsutum HOM05D000880 ORTHO05D007053 1.6e-44 183.3 138 66.7
Solyc09g075190.3 Solanum lycopersicum HOM05D000880 ORTHO05D007053 1.6e-44 183.3 140 68.6
COL.COLO4_23337 Corchorus olitorius HOM05D000880 ORTHO05D007053 2.1e-44 183.0 138 67.4
Thecc.01G301400 Theobroma cacao HOM05D000880 ORTHO05D007053 2.1e-44 183.0 138 67.4
Sopen09g030010 Solanum pennellii HOM05D000880 ORTHO05D007053 3.5e-44 182.2 140 67.9
Cc01_g20910 Coffea canephora HOM05D000880 ORTHO05D007053 4.6e-44 181.8 124 75.8
Migut.D00148 Erythranthe guttata HOM05D000880 ORTHO05D007053 6.0e-44 181.4 134 67.9
CSS0009761 Camellia sinensis var. sinensis HOM05D000880 ORTHO05D007053 1.0e-43 180.6 120 75.0
PGR044G2013 Punica granatum HOM05D000880 ORTHO05D007053 2.3e-43 179.5 138 65.9
SGA_v2.0_scaffold1G00361 Striga asiatica HOM05D000880 ORTHO05D007053 3.9e-43 178.7 138 63.8
Peaxi162Scf00001g42030 Petunia axillaris HOM05D000880 ORTHO05D007053 5.1e-43 178.3 138 65.2
Nitab4.5_0002433g0080 Nicotiana tabacum HOM05D000880 ORTHO05D007053 3.3e-42 175.6 140 65.0
Nitab4.5_0001879g0170 Nicotiana tabacum HOM05D000880 ORTHO05D007053 4.3e-42 175.3 140 65.7
Aqoxy2G02934 Aquilegia oxysepala HOM05D000880 ORTHO05D007053 5.6e-42 174.9 139 67.6
Ciclev10018978m.g Citrus clementina HOM05D000880 ORTHO05D007053 9.6e-42 174.1 138 64.5
Lj2C1196G7 Lonicera japonica HOM05D000880 ORTHO05D007053 1.6e-41 173.3 138 64.5
SalBow3G0448 Salvia bowleyana HOM05D000880 ORTHO05D007053 2.8e-41 172.6 138 62.3
Manes.05G061800 Manihot esculenta HOM05D000880 ORTHO05D007053 4.8e-41 171.8 138 63.0
DCAR_018329 Daucus carota HOM05D000880 ORTHO05D007053 6.2e-41 171.4 139 64.0
Gohir.D08G086000 Gossypium hirsutum HOM05D000880 ORTHO05D007053 6.2e-41 171.4 138 63.0
Lsat_1_v5_gn_9_43261 Lactuca sativa HOM05D000880 ORTHO05D007053 6.2e-41 171.4 138 64.5
MSTRG.9184 Avicennia marina HOM05D000880 ORTHO05D007053 8.1e-41 171.0 138 60.9
Oeu054121.1 Olea europaea HOM05D000880 ORTHO05D007053 8.1e-41 171.0 138 62.3
Hund05431 Selenicereus undatus HOM05D000880 ORTHO05D007053 1.1e-40 170.6 138 61.6
Ah.15g093160 Amaranthus hybridus HOM05D000880 ORTHO05D007053 2.4e-40 169.5 140 63.6
Lsat_1_v5_gn_8_164240 Lactuca sativa HOM05D000880 ORTHO05D007053 2.4e-40 169.5 138 64.5
HanXRQChr10g0285001 Helianthus annuus HOM05D000880 ORTHO05D007053 1.2e-39 167.2 138 63.8
THA.LOC104802176 Tarenaya hassleriana HOM05D000880 ORTHO05D007053 1.2e-39 167.2 139 64.0
AUR62008670 Chenopodium quinoa HOM05D000880 ORTHO05D007053 2.0e-39 166.4 140 62.9
Aa31LG10G9270 Aethionema arabicum HOM05D000880 ORTHO05D007053 2.6e-39 166.0 139 64.0
MELO3C026912.2 Cucumis melo HOM05D000880 ORTHO05D007053 2.6e-39 166.0 139 64.0
CsaV3_1G043050 Cucumis sativus L. HOM05D000880 ORTHO05D007053 2.6e-39 166.0 139 64.0
MELO3C015161.2 Cucumis melo HOM05D000880 ORTHO05D007053 5.8e-39 164.9 139 64.0
AL5G34740 Arabidopsis lyrata HOM05D000880 ORTHO05D007053 1.7e-38 163.3 140 62.9
AT3G53760 Arabidopsis thaliana HOM05D000880 ORTHO05D007053 1.7e-38 163.3 140 62.9
AUR62025574 Chenopodium quinoa HOM05D000880 ORTHO05D007053 1.7e-38 163.3 140 62.1
Sed0026689 Sechium edule HOM05D000880 ORTHO05D007053 2.9e-38 162.5 139 62.6
MBI14_g32928_MAGBIO Magnolia biondii HOM05D000880 ORTHO05D007053 3.8e-38 162.2 134 64.9
Carub.0005s2034 Capsella rubella HOM05D000880 ORTHO05D007053 6.4e-38 161.4 140 62.1
Prupe.8G262200 Prunus persica HOM05D000880 ORTHO05D007053 6.4e-38 161.4 138 63.8
EL10Ac7g17514 Beta vulgaris HOM05D000880 ORTHO05D007053 8.4e-38 161.0 140 60.7
ClCG03G013010 Citrullus lanatus HOM05D000880 ORTHO05D007053 1.1e-37 160.6 139 62.6
CARHR163650 Cardamine hirsuta HOM05D000880 ORTHO05D007053 1.9e-37 159.8 140 62.9
SHI15144 Sapria himalayana HOM05D000880 ORTHO05D007053 1.9e-37 159.8 138 57.2
A09p46740 Brassica napus HOM05D000880 ORTHO05D007053 4.2e-37 158.7 137 65.0
BolC8t50508H Brassica oleracea HOM05D000880 ORTHO05D007053 5.4e-37 158.3 143 62.2
BcaB01g00245 Brassica carinata HOM05D000880 ORTHO05D007053 7.1e-37 157.9 142 62.7
MD03G1288900 Malus domestica HOM05D000880 ORTHO05D007053 1.6e-36 156.8 138 60.1
Sp5g08620 Schrenkiella parvula HOM05D000880 ORTHO05D007053 2.7e-36 156.0 140 62.9
BcaC07g39735 Brassica carinata HOM05D000880 ORTHO05D007053 3.5e-36 155.6 143 61.5
C08p29070 Brassica napus HOM05D000880 ORTHO05D007053 3.5e-36 155.6 143 61.5
Thhalv10010145m.g Eutrema salsugineum HOM05D000880 ORTHO05D007053 3.5e-36 155.6 140 62.1
FAN15G1023 Fragaria x ananassa HOM05D000880 ORTHO05D007053 3.5e-36 155.6 138 58.7
Gorai.004G090500 Gossypium raimondii HOM05D000880 ORTHO05D007053 3.5e-36 155.6 130 60.8
ATR0057G121 Amborella trichopoda HOM05D000880 ORTHO05D007053 4.6e-36 155.2 134 60.4
FAN20G0148 Fragaria x ananassa HOM05D000880 ORTHO05D007053 4.6e-36 155.2 138 58.7
FvH4_2g25810 Fragaria vesca HOM05D000880 ORTHO05D007053 1.0e-35 154.1 138 58.0
Lalb_Chr21g0309241 Lupinus albus HOM05D000880 ORTHO05D007053 1.3e-35 153.7 136 61.0
RcHm_v2.0_Chr6g0294121 Rosa chinensis HOM05D000880 ORTHO05D007053 1.1e-34 150.6 138 58.7
Sc05g0003770 Simmondsia chinensis HOM05D000880 ORTHO05D007053 1.1e-34 150.6 141 57.4
Cfa005905 Carpinus fangiana HOM05D000880 ORTHO05D007053 1.9e-34 149.8 138 59.4
Gohir.A08G076500 Gossypium hirsutum HOM05D000880 ORTHO05D007053 1.9e-34 149.8 118 63.6
Potri.014G128400 Populus trichocarpa HOM05D000880 ORTHO05D007053 1.9e-34 149.8 139 61.2
Haze_04945 Corylus avellana HOM05D000880 ORTHO05D007053 2.5e-34 149.4 138 59.4
ECA247G4025 Erigeron canadensis HOM05D000880 ORTHO05D007053 4.3e-34 148.7 138 57.2
Lalb_Chr02g0146401 Lupinus albus HOM05D000880 ORTHO05D007053 1.6e-33 146.7 136 58.1
HanXRQChr04g0114151 Helianthus annuus HOM05D000880 ORTHO05D007053 2.8e-33 146.0 138 58.0
FAN24G3174 Fragaria x ananassa HOM05D000880 ORTHO05D007053 2.6e-31 139.4 120 60.0
VMungo0720G1277 Vigna mungo HOM05D000880 ORTHO05D007053 3.4e-31 139.0 138 53.6
Glyma.02G017400 Glycine max HOM05D000880 ORTHO05D007053 4.5e-31 138.7 138 55.8
Phvul.007G147200 Phaseolus vulgaris HOM05D000880 ORTHO05D007053 5.8e-31 138.3 138 53.6
arahy.Tifrunner.gnm1.ann1.JXQ8LX Arachis hypogaea HOM05D000880 ORTHO05D007053 2.2e-30 136.3 138 53.6
arahy.Tifrunner.gnm1.ann1.VZZJ8Q Arachis hypogaea HOM05D000880 ORTHO05D007053 2.2e-30 136.3 138 53.6
Glyma.10G017800 Glycine max HOM05D000880 ORTHO05D007053 2.9e-30 136.0 138 53.6
TPR.G33956 Trifolium pratense HOM05D000880 ORTHO05D007053 2.9e-30 136.0 126 59.5
Medtr1g088410 Medicago truncatula HOM05D000880 ORTHO05D007053 4.9e-30 135.2 126 59.5
Psat6g165160 Pisum sativum HOM05D000880 ORTHO05D007053 6.4e-30 134.8 126 60.3
HPP92_007056 Vanilla planifolia HOM05D000880 ORTHO05D007053 6.4e-30 134.8 134 55.2
QL12p028391 Quercus lobata HOM05D000880 ORTHO05D007053 3.2e-29 132.5 140 56.4
Lj5g0001867 Lotus japonicus HOM05D000880 ORTHO05D007053 4.2e-29 132.1 134 55.2
Zm00001eb282720 Zea mays HOM05D000880 ORTHO05D007053 7.1e-29 131.3 139 52.5
Ca_10329_v3 Cicer arietinum L. HOM05D000880 ORTHO05D007053 9.3e-29 131.0 126 58.7
ECA236G1870 Erigeron canadensis HOM05D000880 ORTHO05D007053 1.6e-28 130.2 133 53.4
unitig_32.g10658 Utricularia gibba HOM05D000880 ORTHO05D007053 2.3e-27 126.3 207 38.6
Os05g0154500 Oryza sativa ssp. japonica HOM05D000880 ORTHO05D007053 1.5e-26 123.6 139 49.6
SMO364G0941 Selaginella moellendorffii HOM05D000880 ORTHO05D007053 9.6e-26 120.9 142 47.9
Mapoly0009s0235 Marchantia polymorpha HOM05D000880 ORTHO05D007053 1.6e-25 120.2 141 46.1
Cpa.g.sc9.255 Carica papaya HOM05D000880 ORTHO05D007053 4.5e-23 112.1 138 49.3
Pp3c14_20420 Physcomitrium patens HOM05D000880 ORTHO05D007053 6.5e-22 108.2 151 41.1
AagrBONN_evm.TU.Sc2ySwM_117.410 Anthoceros agrestis HOM05D000880 ORTHO05D007053 2.5e-21 106.3 142 43.0
AUR62018540 Chenopodium quinoa HOM05D000880 ORTHO05D007053 1.8e-19 100.1 138 42.8
AUR62039138 Chenopodium quinoa HOM05D000880 ORTHO05D043363 3.7e-17 92.4 83 59.0
BcaB01g00241 Brassica carinata HOM05D000880 ORTHO05D007053 6.9e-16 88.2 114 49.1
MD11G1309000 Malus domestica HOM05D000880 ORTHO05D007053 3.4e-15 85.9 134 45.5
BraA09t40136Z Brassica rapa HOM05D000880 ORTHO05D007053 5.8e-15 85.1 110 50.0
Lsat_1_v5_gn_9_5381 Lactuca sativa HOM05D000880 ORTHO05D007053 2.2e-14 83.2 70 57.1
CBR_g8603 Chara braunii HOM05D000880 ORTHO05D007053 7.4e-10 68.2 122 35.2
MCO03G526 Micromonas commoda HOM05D000880 ORTHO05D007053 4.1e-08 62.4 149 31.5
SEGI_14411 Sequoiadendron giganteum HOM05D000807 ORTHO05D000662 1.2e-07 60.8 75 46.7
Cre01.g019150 Chlamydomonas reinhardtii HOM05D000880 ORTHO05D007053 3.4e-07 59.3 136 30.1


User provided reference genes

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