Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR365G0727 Trochodendron aralioides HOM05D005810 ORTHO05D007279 1.7e-257 892.1 449 100.0
GSVIVG01021833001 Vitis vinifera HOM05D005810 ORTHO05D007279 8.9e-177 624.0 492 66.3
CSS0027419 Camellia sinensis var. sinensis HOM05D005810 ORTHO05D007279 1.3e-172 610.1 493 65.5
CSS0013071 Camellia sinensis var. sinensis HOM05D005810 ORTHO05D007279 6.6e-172 607.8 501 64.5
QL03p024871 Quercus lobata HOM05D005810 ORTHO05D007279 1.9e-171 606.3 496 65.3
Cfa006452 Carpinus fangiana HOM05D005810 ORTHO05D007279 5.8e-168 594.7 493 64.1
Ciclev10003382m.g Citrus clementina HOM05D005810 ORTHO05D007279 2.2e-167 592.8 492 64.6
Prupe.6G340900 Prunus persica HOM05D005810 ORTHO05D007279 2.9e-167 592.4 492 64.4
PSO210G1835 Papaver somniferum HOM05D005810 ORTHO05D007279 3.7e-167 592.0 492 64.0
Aqoxy5G00419 Aquilegia oxysepala HOM05D005810 ORTHO05D007279 1.1e-166 590.5 490 63.5
Duzib177G1000 Durio zibethinus HOM05D005810 ORTHO05D007279 2.1e-165 586.3 493 62.7
Thecc.05G287300 Theobroma cacao HOM05D005810 ORTHO05D007279 3.5e-165 585.5 493 63.3
PSO832G3650 Papaver somniferum HOM05D005810 ORTHO05D007279 4.6e-165 585.1 498 62.4
CANSAT54G2140 Cannabis sativa HOM05D005810 ORTHO05D007279 3.3e-163 578.9 494 62.8
COL.COLO4_15299 Corchorus olitorius HOM05D005810 ORTHO05D007279 4.7e-162 575.1 502 61.8
Potri.005G051400 Populus trichocarpa HOM05D005810 ORTHO05D007279 4.7e-162 575.1 493 62.7
RcHm_v2.0_Chr3g0451831 Rosa chinensis HOM05D005810 ORTHO05D007279 1.8e-161 573.2 501 61.9
Gohir.A11G254200 Gossypium hirsutum HOM05D005810 ORTHO05D007279 8.9e-161 570.9 492 61.8
MD04G1221700 Malus domestica HOM05D005810 ORTHO05D007279 5.8e-160 568.2 494 63.0
FvH4_6g03330 Fragaria vesca HOM05D005810 ORTHO05D007279 1.3e-159 567.0 500 60.8
Gorai.007G284000 Gossypium raimondii HOM05D005810 ORTHO05D007279 1.3e-159 567.0 492 61.6
Gohir.D11G264000 Gossypium hirsutum HOM05D005810 ORTHO05D007279 3.2e-158 562.4 492 61.4
CAN.G134.120 Capsicum annuum HOM05D005810 ORTHO05D007279 3.9e-156 555.4 492 62.0
MELO3C024669.2 Cucumis melo HOM05D005810 ORTHO05D007279 5.6e-155 551.6 496 60.9
Aa31LG5G15210 Aethionema arabicum HOM05D005810 ORTHO05D007279 1.5e-152 543.5 488 58.4
THA.LOC104821678 Tarenaya hassleriana HOM05D005810 ORTHO05D007279 4.4e-152 542.0 496 58.3
Sp3g03650 Schrenkiella parvula HOM05D005810 ORTHO05D007279 1.7e-151 540.0 491 57.4
AL3G14980 Arabidopsis lyrata HOM05D005810 ORTHO05D007279 4.9e-151 538.5 491 58.0
AT3G04820 Arabidopsis thaliana HOM05D005810 ORTHO05D007279 1.9e-150 536.6 490 57.3
arahy.Tifrunner.gnm1.ann1.BBX725 Arachis hypogaea HOM05D005810 ORTHO05D007279 4.2e-150 535.4 495 59.4
CARHR079070 Cardamine hirsuta HOM05D005810 ORTHO05D007279 9.2e-150 534.3 491 56.8
BcaB04g19298 Brassica carinata HOM05D005810 ORTHO05D007279 1.2e-149 533.9 486 58.0
Sed0015078 Sechium edule HOM05D005810 ORTHO05D007279 2.1e-149 533.1 503 58.4
BcaC01g04347 Brassica carinata HOM05D005810 ORTHO05D007279 7.8e-149 531.2 485 58.1
BolC3t16404H Brassica oleracea HOM05D005810 ORTHO05D007279 1.0e-148 530.8 485 58.1
Eucgr.B01694 Eucalyptus grandis HOM05D005810 ORTHO05D007279 1.0e-148 530.8 493 58.8
Lalb_Chr18g0045021 Lupinus albus HOM05D005810 ORTHO05D007279 1.0e-148 530.8 489 60.1
arahy.Tifrunner.gnm1.ann1.E80190 Arachis hypogaea HOM05D005810 ORTHO05D007279 1.7e-148 530.0 495 59.0
C03p41160 Brassica napus HOM05D005810 ORTHO05D007279 1.7e-148 530.0 485 57.9
Thhalv10022286m.g Eutrema salsugineum HOM05D005810 ORTHO05D007279 3.0e-148 529.3 485 57.5
ClCG06G009190 Citrullus lanatus HOM05D005810 ORTHO05D007279 1.9e-147 526.6 491 58.5
Glyma.03G245900 Glycine max HOM05D005810 ORTHO05D007279 4.3e-147 525.4 493 58.6
Rhsim05G0160900 Rhododendron simsii HOM05D005810 ORTHO05D007279 4.3e-147 525.4 509 56.6
Migut.B01074 Erythranthe guttata HOM05D005810 ORTHO05D007279 5.6e-147 525.0 490 56.9
Glyma.19G243400 Glycine max HOM05D005810 ORTHO05D007279 7.3e-147 524.6 494 59.1
Carub.0003s0400 Capsella rubella HOM05D005810 ORTHO05D007279 1.2e-146 523.9 490 56.7
ECA232G3974 Erigeron canadensis HOM05D005810 ORTHO05D007279 1.2e-146 523.9 490 58.2
Lj1g0027742 Lotus japonicus HOM05D005810 ORTHO05D007279 2.8e-146 522.7 490 58.4
Nitab4.5_0005059g0010 Nicotiana tabacum HOM05D005810 ORTHO05D007279 8.1e-146 521.2 469 61.4
EL10Ac4g09107 Beta vulgaris HOM05D005810 ORTHO05D007279 4.0e-145 518.8 493 57.4
A03p33850 Brassica napus HOM05D005810 ORTHO05D007279 9.0e-145 517.7 502 55.6
BraA03t12559Z Brassica rapa HOM05D005810 ORTHO05D007279 9.0e-145 517.7 502 55.6
CDE05G3473 Ceratophyllum demersum HOM05D005810 ORTHO05D007279 9.0e-145 517.7 492 57.9
MD12G1237800 Malus domestica HOM05D005810 ORTHO05D007279 2.6e-144 516.2 439 61.3
Ca_09411_v3 Cicer arietinum L. HOM05D005810 ORTHO05D007279 1.7e-143 513.5 495 57.0
Phvul.006G100200 Phaseolus vulgaris HOM05D005810 ORTHO05D007279 2.2e-143 513.1 494 57.7
Ah.06g192190 Amaranthus hybridus HOM05D005810 ORTHO05D007279 6.4e-143 511.5 506 55.9
SalBow8G0563 Salvia bowleyana HOM05D005810 ORTHO05D007279 6.4e-143 511.5 499 56.3
PGR031G1118 Punica granatum HOM05D005810 ORTHO05D007279 1.4e-142 510.4 493 56.6
Psat3g008040 Pisum sativum HOM05D005810 ORTHO05D007279 3.2e-142 509.2 495 56.6
VMungo0222G0001 Vigna mungo HOM05D005810 ORTHO05D007279 2.1e-141 506.5 500 56.4
Medtr7g114850 Medicago truncatula HOM05D005810 ORTHO05D007279 6.0e-141 505.0 473 58.4
ATR0665G477 Amborella trichopoda HOM05D005810 ORTHO05D007279 2.3e-140 503.1 462 60.0
DCAR_006618 Daucus carota HOM05D005810 ORTHO05D007279 1.5e-139 500.4 475 56.0
TPR.G6991 Trifolium pratense HOM05D005810 ORTHO05D007279 5.6e-139 498.4 510 54.5
Cpa.g.sc117.72 Carica papaya HOM05D005810 ORTHO05D007279 2.8e-138 496.1 506 56.5
Peaxi162Scf00282g00136 Petunia axillaris HOM05D005810 ORTHO05D007279 3.6e-138 495.7 480 58.5
HanXRQChr12g0379621 Helianthus annuus HOM05D005810 ORTHO05D007279 4.8e-138 495.4 498 55.4
AUR62001034 Chenopodium quinoa HOM05D005810 ORTHO05D007279 1.8e-137 493.4 536 53.2
MBI11_g10322_MAGBIO Magnolia biondii HOM05D005810 ORTHO05D007279 2.4e-137 493.0 465 61.3
HPP92_028013 Vanilla planifolia HOM05D005810 ORTHO05D007279 2.2e-135 486.5 465 56.3
vmacro14215 Vaccinium macrocarpon HOM05D005810 ORTHO05D007279 1.6e-133 480.3 573 49.4
AUR62004921 Chenopodium quinoa HOM05D005810 ORTHO05D007279 2.1e-130 469.9 479 55.9
Zm00001eb328420 Zea mays HOM05D005810 ORTHO05D007279 1.5e-128 463.8 480 52.7
Eucgr.B02108 Eucalyptus grandis HOM05D005810 ORTHO05D007279 8.2e-122 441.4 486 51.2
CiPaw.07G064800 Carya illinoinensis HOM05D005810 ORTHO05D007279 9.0e-121 438.0 339 66.1
Lj7C488G4 Lonicera japonica HOM05D005810 ORTHO05D007279 9.0e-121 438.0 501 51.3
Manes.08G132300 Manihot esculenta HOM05D005810 ORTHO05D007279 1.2e-120 437.6 339 66.4
Hund06958 Selenicereus undatus HOM05D005810 ORTHO05D007279 3.8e-119 432.6 481 54.1
CsaV3_1G045590 Cucumis sativus L. HOM05D005810 ORTHO05D007279 1.5e-115 420.6 328 66.5
Lsat_1_v5_gn_5_37760 Lactuca sativa HOM05D005810 ORTHO05D007279 4.3e-115 419.1 373 59.0
FAN05G1843 Fragaria x ananassa HOM05D005810 ORTHO05D007279 1.2e-112 411.0 484 51.0
Dinv13660 Davidia involucrata HOM05D005810 ORTHO05D007279 4.6e-109 399.1 303 66.7
unitig_37.g12634 Utricularia gibba HOM05D005810 ORTHO05D007279 1.8e-108 397.1 480 48.5
Sc09g0003830 Simmondsia chinensis HOM05D005810 ORTHO05D007279 3.7e-106 389.4 324 61.4
Pp3c18_8560 Physcomitrium patens HOM05D005810 ORTHO05D007279 1.1e-105 387.9 493 43.2
Mapoly0092s0013 Marchantia polymorpha HOM05D005810 ORTHO05D007279 2.7e-101 373.2 496 43.1
Manes.09G154600 Manihot esculenta HOM05D005810 ORTHO05D007279 6.1e-101 372.1 296 66.2
SMO351G0210 Selaginella moellendorffii HOM05D005810 ORTHO05D007279 4.1e-97 359.4 506 41.7
Cc02_g31830 Coffea canephora HOM05D005810 ORTHO05D007279 7.7e-96 355.1 303 64.0
Atru.chr2.784 Acer truncatum HOM05D005810 ORTHO05D007279 1.7e-90 337.4 248 69.4
MCO09G788 Micromonas commoda HOM05D005810 ORTHO05D007279 2.4e-73 280.4 490 37.1
Haze_04340 Corylus avellana HOM05D005810 ORTHO05D007279 9.1e-73 278.5 259 59.5
CBR_g36821 Chara braunii HOM05D005810 ORTHO05D007279 1.2e-69 268.1 544 33.5
Oeu060673.3 Olea europaea HOM05D005810 ORTHO05D007279 2.3e-68 263.8 394 42.6
SMO364G0521 Selaginella moellendorffii HOM05D005810 ORTHO05D007279 1.2e-67 261.5 493 37.1
Haze_04339 Corylus avellana HOM05D005810 ORTHO05D007279 8.3e-66 255.4 143 85.3
PRCOL_00005025 Prasinoderma coloniale HOM05D005810 ORTHO05D007279 5.9e-64 249.2 527 32.8
Zm00001eb352870 Zea mays HOM05D005810 ORTHO05D007279 1.1e-62 245.0 206 60.2
Solyc01g097600.2 Solanum lycopersicum HOM05D005810 ORTHO05D007279 2.5e-62 243.8 149 79.9
Sopen01g041230 Solanum pennellii HOM05D005810 ORTHO05D007279 2.5e-62 243.8 149 79.9
Nitab4.5_0005729g0070 Nicotiana tabacum HOM05D005810 ORTHO05D007279 2.0e-59 234.2 248 53.2
Os05g0509300 Oryza sativa ssp. japonica HOM05D005810 ORTHO05D007279 2.6e-59 233.8 149 73.8
AagrBONN_evm.TU.Sc2ySwM_362.2882 Anthoceros agrestis HOM05D005810 ORTHO05D007279 1.6e-56 224.6 304 42.8
CsaV3_UNG004080 Cucumis sativus L. HOM05D005810 ORTHO05D007279 2.3e-55 220.7 237 51.5
FAN05G0700 Fragaria x ananassa HOM05D005810 ORTHO05D007279 6.2e-53 212.6 149 70.5
FAN14G4259 Fragaria x ananassa HOM05D005810 ORTHO05D007279 1.1e-52 211.8 149 69.8
FAN02G1150 Fragaria x ananassa HOM05D005810 ORTHO05D007279 1.8e-52 211.1 149 69.8
Nitab4.5_0005729g0080 Nicotiana tabacum HOM05D005810 ORTHO05D007279 3.1e-52 210.3 129 79.8
Dinv13659 Davidia involucrata HOM05D005810 ORTHO05D007279 2.6e-51 207.2 121 84.3
Atru.chr2.785 Acer truncatum HOM05D005810 ORTHO05D007279 1.4e-49 201.4 154 66.9
Cc02_g31840 Coffea canephora HOM05D005810 ORTHO05D007279 1.2e-45 188.3 196 54.6
Zm00001eb054900 Zea mays HOM05D005810 ORTHO05D007279 2.1e-45 187.6 161 59.6
Os01g0773000 Oryza sativa ssp. japonica HOM05D005810 ORTHO05D007279 3.6e-45 186.8 121 76.0
Cre01.g007651 Chlamydomonas reinhardtii HOM05D005810 ORTHO05D007279 4.7e-45 186.4 629 27.0
AagrBONN_evm.TU.Sc2ySwM_362.2883 Anthoceros agrestis HOM05D005810 ORTHO05D007279 5.8e-43 179.5 121 69.4
Zm00001eb281050 Zea mays HOM05D005810 ORTHO05D007279 1.2e-40 171.8 163 55.2
HPP92_018612 Vanilla planifolia HOM05D005810 ORTHO05D007279 2.5e-38 164.1 153 56.2
Sopen01g041220 Solanum pennellii HOM05D005810 ORTHO05D007279 2.2e-26 124.4 139 54.0
ClCG06G009160 Citrullus lanatus HOM05D005810 ORTHO05D007279 3.2e-25 120.6 151 46.4
Hma1.2p1_0083F.1_g042850 Hydrangea macrophylla HOM05D005810 ORTHO05D007279 4.2e-25 120.2 136 53.7
FAN09G1409 Fragaria x ananassa HOM05D005810 ORTHO05D007279 7.1e-25 119.4 152 50.7
CsaV3_1G045610 Cucumis sativus L. HOM05D005810 ORTHO05D007279 1.3e-21 108.6 143 48.3
CsaV3_UNG004060 Cucumis sativus L. HOM05D005810 ORTHO05D007279 1.3e-21 108.6 143 48.3
SHI07783 Sapria himalayana HOM05D000023 ORTHO05D000014 3.3e-14 84.0 75 54.7
MBI11_g02497_MAGBIO Magnolia biondii HOM05D005810 ORTHO05D007279 8.1e-13 79.3 81 59.3
Mapoly0081s0042 Marchantia polymorpha HOM05D005810 ORTHO05D007279 9.3e-09 65.9 51 56.9
Mapoly0027s0098 Marchantia polymorpha HOM05D005810 ORTHO05D007279 3.5e-08 63.9 76 44.7


User provided reference genes

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