Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR362G0339 Trochodendron aralioides HOM05D004093 ORTHO05D415190 1.1e-30 136.0 68 100.0
TAR362G0437 Trochodendron aralioides HOM05D004093 ORTHO05D415399 1.1e-30 136.0 68 100.0
TAR159G0001 Trochodendron aralioides HOM05D004093 ORTHO05D004981 5.0e-15 84.0 65 67.7
Nn6g32059 Nelumbo nucifera HOM05D004093 ORTHO05D004981 7.2e-14 80.1 65 63.1
FvH4_2g03040 Fragaria vesca HOM05D004093 ORTHO05D004981 1.2e-13 79.3 63 65.1
FAN15G0664 Fragaria x ananassa HOM05D004093 ORTHO05D004981 1.2e-13 79.3 63 65.1
FAN24G1787 Fragaria x ananassa HOM05D004093 ORTHO05D004981 1.2e-13 79.3 63 65.1
FAN27G3135 Fragaria x ananassa HOM05D004093 ORTHO05D004981 3.6e-13 77.8 63 63.5
PSO210G2081 Papaver somniferum HOM05D004093 ORTHO05D004981 4.7e-13 77.4 68 63.2
RcHm_v2.0_Chr6g0247831 Rosa chinensis HOM05D004093 ORTHO05D004981 6.1e-13 77.0 60 66.7
PGSC0003DMG402005133 Solanum tuberosum HOM05D004093 ORTHO05D004981 8.0e-13 76.6 65 60.0
PSO447G0184 Papaver somniferum HOM05D004093 ORTHO05D004981 1.0e-12 76.3 65 61.5
Peaxi162Scf00016g03248 Petunia axillaris HOM05D004093 ORTHO05D004981 1.0e-12 76.3 65 60.0
GSVIVG01037036001 Vitis vinifera HOM05D004093 ORTHO05D004981 1.4e-12 75.9 65 58.5
QL11p028820 Quercus lobata HOM05D004093 ORTHO05D004981 1.8e-12 75.5 60 63.3
Cfa004713 Carpinus fangiana HOM05D004093 ORTHO05D004981 2.3e-12 75.1 60 61.7
Hma1.2p1_1758F.1_g301170 Hydrangea macrophylla HOM05D004093 ORTHO05D004981 2.3e-12 75.1 65 60.0
Sed0024148 Sechium edule HOM05D004093 ORTHO05D004981 2.3e-12 75.1 68 58.8
Solyc01g106740.4 Solanum lycopersicum HOM05D004093 ORTHO05D004981 2.3e-12 75.1 65 58.5
Sopen01g049060 Solanum pennellii HOM05D004093 ORTHO05D004981 2.3e-12 75.1 65 58.5
arahy.Tifrunner.gnm1.ann1.K8EMZF Arachis hypogaea HOM05D004093 ORTHO05D004981 3.0e-12 74.7 68 52.9
CsaV3_4G000020 Cucumis sativus L. HOM05D004093 ORTHO05D004981 6.8e-12 73.6 65 58.5
CSS0001341 Camellia sinensis var. sinensis HOM05D004093 ORTHO05D004981 8.8e-12 73.2 59 64.4
ClCG10G009970 Citrullus lanatus HOM05D004093 ORTHO05D004981 8.8e-12 73.2 64 60.9
MBI16_g34665_MAGBIO Magnolia biondii HOM05D004093 ORTHO05D004981 8.8e-12 73.2 65 56.9
Gohir.A01G180900 Gossypium hirsutum HOM05D004093 ORTHO05D004981 1.2e-11 72.8 65 56.9
Gohir.D01G172000 Gossypium hirsutum HOM05D004093 ORTHO05D004981 1.2e-11 72.8 65 55.4
Gorai.002G213600 Gossypium raimondii HOM05D004093 ORTHO05D004981 1.2e-11 72.8 65 55.4
Nitab4.5_0000772g0040 Nicotiana tabacum HOM05D004093 ORTHO05D004981 1.2e-11 72.8 61 60.7
Haze_10324 Corylus avellana HOM05D004093 ORTHO05D004981 1.5e-11 72.4 60 60.0
arahy.Tifrunner.gnm1.ann1.14EEYB Arachis hypogaea HOM05D004093 ORTHO05D004981 2.0e-11 72.0 65 53.8
Glyma.05G236700 Glycine max HOM05D004093 ORTHO05D004981 2.0e-11 72.0 64 56.2
MD10G1112200 Malus domestica HOM05D004093 ORTHO05D004981 2.0e-11 72.0 60 58.3
Rhsim11G0149600 Rhododendron simsii HOM05D004093 ORTHO05D004981 2.6e-11 71.6 65 55.4
TWI59G0012 Tripterygium wilfordii HOM05D004093 ORTHO05D004981 2.6e-11 71.6 65 52.3
COL.COLO4_17799 Corchorus olitorius HOM05D004093 ORTHO05D004981 3.4e-11 71.2 65 56.9
Dinv16064 Davidia involucrata HOM05D004093 ORTHO05D004981 3.4e-11 71.2 60 60.0
Duzib052G0943 Durio zibethinus HOM05D004093 ORTHO05D004981 4.4e-11 70.9 65 55.4
Potri.009G084300 Populus trichocarpa HOM05D004093 ORTHO05D004981 4.4e-11 70.9 65 55.4
Aqoxy2G01432 Aquilegia oxysepala HOM05D004093 ORTHO05D004981 5.7e-11 70.5 65 53.8
Glyma.08G043900 Glycine max HOM05D004093 ORTHO05D004981 5.7e-11 70.5 64 54.7
Thecc.02G031600 Theobroma cacao HOM05D004093 ORTHO05D004981 5.7e-11 70.5 65 53.8
Atru.chr5.2252 Acer truncatum HOM05D004093 ORTHO05D004981 9.8e-11 69.7 63 60.3
A01p04580 Brassica napus HOM05D004093 ORTHO05D004981 9.8e-11 69.7 64 53.1
BraA01t00441Z Brassica rapa HOM05D004093 ORTHO05D004981 9.8e-11 69.7 64 53.1
ECA233G6085 Erigeron canadensis HOM05D004093 ORTHO05D004981 9.8e-11 69.7 60 55.0
Migut.N01121 Erythranthe guttata HOM05D004093 ORTHO05D004981 9.8e-11 69.7 60 58.3
Lalb_Chr16g0387791 Lupinus albus HOM05D004093 ORTHO05D004981 9.8e-11 69.7 65 53.8
Oeu018200.1 Olea europaea HOM05D004093 ORTHO05D004981 9.8e-11 69.7 60 56.7
unitig_62.g23638 Utricularia gibba HOM05D004093 ORTHO05D004981 9.8e-11 69.7 61 52.5
VMungo0251G2341 Vigna mungo HOM05D004093 ORTHO05D004981 9.8e-11 69.7 65 52.3
AL7G17710 Arabidopsis lyrata HOM05D004093 ORTHO05D004981 1.3e-10 69.3 61 59.0
AT4G33760 Arabidopsis thaliana HOM05D004093 ORTHO05D004981 1.3e-10 69.3 61 59.0
BcaB03g11876 Brassica carinata HOM05D004093 ORTHO05D004981 1.3e-10 69.3 61 57.4
BcaNung04674 Brassica carinata HOM05D004093 ORTHO05D004981 1.3e-10 69.3 61 55.7
A08p17410 Brassica napus HOM05D004093 ORTHO05D004981 1.3e-10 69.3 61 57.4
CAN.G606.83 Capsicum annuum HOM05D004093 ORTHO05D004981 1.3e-10 69.3 65 56.9
Lsat_1_v5_gn_9_113901 Lactuca sativa HOM05D004093 ORTHO05D004981 1.3e-10 69.3 60 56.7
Sabra09G0065000 Salix brachista HOM05D004093 ORTHO05D004981 1.3e-10 69.3 65 53.8
TWI14G0771 Tripterygium wilfordii HOM05D004093 ORTHO05D004981 1.3e-10 69.3 65 52.3
CARHR241850 Cardamine hirsuta HOM05D004093 ORTHO05D004981 1.7e-10 68.9 61 57.4
ECA240G1647 Erigeron canadensis HOM05D004093 ORTHO05D004981 1.7e-10 68.9 60 55.0
HanXRQChr16g0510261 Helianthus annuus HOM05D004093 ORTHO05D004981 1.7e-10 68.9 65 50.8
Lj4g0018571 Lotus japonicus HOM05D004093 ORTHO05D004981 1.7e-10 68.9 65 53.8
Nitab4.5_0010657g0010 Nicotiana tabacum HOM05D004093 ORTHO05D004981 1.7e-10 68.9 60 60.0
Phvul.002G318600 Phaseolus vulgaris HOM05D004093 ORTHO05D004981 1.7e-10 68.9 65 52.3
Sp7g31500 Schrenkiella parvula HOM05D004093 ORTHO05D004981 1.7e-10 68.9 61 57.4
AUR62023346 Chenopodium quinoa HOM05D004093 ORTHO05D004981 2.2e-10 68.6 65 53.8
Ciclev10028050m.g Citrus clementina HOM05D004093 ORTHO05D004981 2.2e-10 68.6 65 53.8
Eucgr.I02505 Eucalyptus grandis HOM05D004093 ORTHO05D004981 2.2e-10 68.6 59 59.3
Actinidia04397 Actinidia chinensis HOM05D004093 ORTHO05D004981 2.8e-10 68.2 60 58.3
MSTRG.27768 Avicennia marina HOM05D004093 ORTHO05D004981 2.8e-10 68.2 61 52.5
A08p17440 Brassica napus HOM05D004093 ORTHO05D004981 2.8e-10 68.2 60 58.3
Cpa.g.sc4140.1 Carica papaya HOM05D004093 ORTHO05D004981 2.8e-10 68.2 60 56.7
Thhalv10024609m.g Eutrema salsugineum HOM05D004093 ORTHO05D004981 2.8e-10 68.2 61 55.7
HanXRQChr03g0069101 Helianthus annuus HOM05D004093 ORTHO05D004981 2.8e-10 68.2 60 55.0
Lj5C222T15 Lonicera japonica HOM05D004093 ORTHO05D004981 2.8e-10 68.2 60 58.3
ATR0767G039 Amborella trichopoda HOM05D004093 ORTHO05D004981 3.7e-10 67.8 65 49.2
BcaC01g00967 Brassica carinata HOM05D004093 ORTHO05D004981 3.7e-10 67.8 60 56.7
C03p86430 Brassica napus HOM05D004093 ORTHO05D004981 3.7e-10 67.8 60 56.7
BolC3t20936H Brassica oleracea HOM05D004093 ORTHO05D004981 3.7e-10 67.8 60 56.7
CiPaw.06G163100 Carya illinoinensis HOM05D004093 ORTHO05D004981 3.7e-10 67.8 60 53.3
Manes.07G052300 Manihot esculenta HOM05D004093 ORTHO05D004981 3.7e-10 67.8 60 58.3
Prupe.8G151800 Prunus persica HOM05D004093 ORTHO05D004981 3.7e-10 67.8 60 51.7
TPR.G32673 Trifolium pratense HOM05D004093 ORTHO05D004981 3.7e-10 67.8 65 50.8
EL10Ac1g00697 Beta vulgaris HOM05D004093 ORTHO05D004981 4.8e-10 67.4 65 50.8
Carub.0007s0667 Capsella rubella HOM05D004093 ORTHO05D004981 4.8e-10 67.4 61 55.7
AUR62013810 Chenopodium quinoa HOM05D004093 ORTHO05D004981 4.8e-10 67.4 65 52.3
THA.LOC104807205 Tarenaya hassleriana HOM05D004093 ORTHO05D004981 4.8e-10 67.4 60 56.7
Cc02_g20210 Coffea canephora HOM05D004093 ORTHO05D004981 6.3e-10 67.0 60 56.7
DCAR_021934 Daucus carota HOM05D004093 ORTHO05D004981 6.3e-10 67.0 65 49.2
BcaC09g52186 Brassica carinata HOM05D004093 ORTHO05D004981 8.3e-10 66.6 61 54.1
BolC1t00478H Brassica oleracea HOM05D004093 ORTHO05D004981 8.3e-10 66.6 61 54.1
Ca_17297_v3 Cicer arietinum L. HOM05D004093 ORTHO05D004981 1.1e-09 66.2 65 49.2
Ca_17304_v3 Cicer arietinum L. HOM05D004093 ORTHO05D004981 1.1e-09 66.2 65 49.2
Medtr4g120810 Medicago truncatula HOM05D004093 ORTHO05D004981 1.1e-09 66.2 69 47.8
Medtr8g104740 Medicago truncatula HOM05D004093 ORTHO05D004981 1.1e-09 66.2 69 47.8
Phvul.011G054700 Phaseolus vulgaris HOM05D004093 ORTHO05D004981 1.1e-09 66.2 65 49.2
Potri.001G289001 Populus trichocarpa HOM05D004093 ORTHO05D004981 1.1e-09 66.2 65 53.8
Sed0011100 Sechium edule HOM05D004093 ORTHO05D004981 1.1e-09 66.2 58 56.9
Aa31sc178G40 Aethionema arabicum HOM05D004093 ORTHO05D004981 1.4e-09 65.9 60 55.0
C01p04970 Brassica napus HOM05D004093 ORTHO05D004981 1.4e-09 65.9 61 54.1
CiPaw.05G021800 Carya illinoinensis HOM05D004093 ORTHO05D004981 1.4e-09 65.9 60 56.7
Oeu037299.1 Olea europaea HOM05D004093 ORTHO05D004981 1.4e-09 65.9 60 53.3
PGR119G0904 Punica granatum HOM05D004093 ORTHO05D004981 1.8e-09 65.5 60 60.0
ECA233G4634 Erigeron canadensis HOM05D004093 ORTHO05D004981 2.4e-09 65.1 60 53.3
SGA_v2.0_scaffold219G42544 Striga asiatica HOM05D004093 ORTHO05D004981 2.4e-09 65.1 59 55.9
vmacro01935 Vaccinium macrocarpon HOM05D004093 ORTHO05D004981 2.4e-09 65.1 59 55.9
Aqoxy7G02734 Aquilegia oxysepala HOM05D004093 ORTHO05D004981 4.1e-09 64.3 57 54.4
SEGI_06015 Sequoiadendron giganteum HOM05D004093 ORTHO05D004981 5.4e-09 63.9 65 47.7
SEGI_18816 Sequoiadendron giganteum HOM05D004093 ORTHO05D004981 5.4e-09 63.9 65 47.7
SEGI_21269 Sequoiadendron giganteum HOM05D004093 ORTHO05D004981 5.4e-09 63.9 65 47.7
SEGI_31310 Sequoiadendron giganteum HOM05D004093 ORTHO05D004981 5.4e-09 63.9 65 47.7
Sabra16G0180800 Salix brachista HOM05D004093 ORTHO05D004981 7.0e-09 63.5 65 52.3
Os01g0153400 Oryza sativa ssp. japonica HOM05D004093 ORTHO05D004981 1.2e-08 62.8 59 52.5
HPP92_001209 Vanilla planifolia HOM05D004093 ORTHO05D004981 1.2e-08 62.8 63 54.0
Ah.05g177500 Amaranthus hybridus HOM05D004093 ORTHO05D004981 2.0e-08 62.0 65 47.7
Sc20g0001830 Simmondsia chinensis HOM05D004093 ORTHO05D004981 4.5e-08 60.8 65 47.7
CDE04G3016 Ceratophyllum demersum HOM05D004093 ORTHO05D004981 7.7e-08 60.1 59 49.2
MELO3C018029.2 Cucumis melo HOM05D004093 ORTHO05D004981 1.3e-07 59.3 62 51.6
CDE07G1203 Ceratophyllum demersum HOM05D004093 ORTHO05D004981 2.3e-07 58.5 59 47.5
Zm00001eb124020 Zea mays HOM05D004093 ORTHO05D004981 2.3e-07 58.5 59 50.8
CANSAT25G3849 Cannabis sativa HOM05D004093 ORTHO05D004981 8.6e-07 56.6 60 43.3
CSS0016143 Camellia sinensis var. sinensis HOM05D004093 ORTHO05D004981 3.3e-06 54.7 47 59.6


User provided reference genes

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