Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR065G0002 Trochodendron aralioides HOM05D003639 ORTHO05D004246 2.0e-89 332.8 221 100.0
TAR369G0628 Trochodendron aralioides HOM05D003639 ORTHO05D004246 5.9e-41 171.8 170 84.7
CSS0048368 Camellia sinensis var. sinensis HOM05D003639 ORTHO05D004246 1.7e-16 90.5 159 56.6
QL07p005224 Quercus lobata HOM05D003639 ORTHO05D004246 1.7e-16 90.5 154 51.3
Lj4C34T1 Lonicera japonica HOM05D003639 ORTHO05D004246 2.3e-16 90.1 153 42.5
CiPaw.09G042100 Carya illinoinensis HOM05D003639 ORTHO05D004246 5.1e-16 89.0 154 55.8
CSS0037940 Camellia sinensis var. sinensis HOM05D003639 ORTHO05D004246 6.6e-16 88.6 173 45.7
Haze_19749 Corylus avellana HOM05D003639 ORTHO05D004246 1.6e-14 84.0 155 54.8
PGSC0003DMG400012703 Solanum tuberosum HOM05D003639 ORTHO05D004246 2.3e-13 80.1 154 55.8
Nn7g37752 Nelumbo nucifera HOM05D003639 ORTHO05D004246 3.1e-13 79.7 152 53.3
ClCG08G008940 Citrullus lanatus HOM05D003639 ORTHO05D004246 4.0e-13 79.3 154 42.2
Dinv30299 Davidia involucrata HOM05D003639 ORTHO05D004246 1.2e-12 77.8 151 54.3
Solyc04g016510.3 Solanum lycopersicum HOM05D003639 ORTHO05D004246 3.4e-12 76.3 154 53.2
Sopen04g008580 Solanum pennellii HOM05D003639 ORTHO05D004246 3.4e-12 76.3 154 53.9
Potri.006G045800 Populus trichocarpa HOM05D003639 ORTHO05D004246 2.2e-11 73.6 150 45.3
Actinidia39194 Actinidia chinensis HOM05D003639 ORTHO05D004246 3.8e-11 72.8 157 66.9
CANSAT80G2101 Cannabis sativa HOM05D003639 ORTHO05D004246 3.8e-11 72.8 144 59.0
CAN.G1237.4 Capsicum annuum HOM05D003639 ORTHO05D004246 3.8e-11 72.8 151 55.0
MELO3C019777.2 Cucumis melo HOM05D003639 ORTHO05D004246 3.8e-11 72.8 165 34.5
Duzib132G0222 Durio zibethinus HOM05D003639 ORTHO05D004246 6.4e-11 72.0 154 51.3
Thecc.02G139000 Theobroma cacao HOM05D003639 ORTHO05D004246 6.4e-11 72.0 154 50.0
CsaV3_6G036200 Cucumis sativus L. HOM05D003639 ORTHO05D004246 1.1e-10 71.2 154 43.5
Sabra06G0031300 Salix brachista HOM05D003639 ORTHO05D004246 1.1e-10 71.2 179 44.7
MELO3C026433.2 Cucumis melo HOM05D003639 ORTHO05D004246 1.4e-10 70.9 154 43.5
CANSAT80G0359 Cannabis sativa HOM05D003639 ORTHO05D004246 2.4e-10 70.1 144 58.3
Hma1.2p1_2162F.1_g315680 Hydrangea macrophylla HOM05D003639 ORTHO05D004246 3.2e-10 69.7 154 53.9
Ciclev10006458m.g Citrus clementina HOM05D003639 ORTHO05D004246 4.1e-10 69.3 153 53.6
Medtr0012s0110 Medicago truncatula HOM05D003639 ORTHO05D004246 7.1e-10 68.6 150 37.3
Duzib248G1450 Durio zibethinus HOM05D003639 ORTHO05D004246 1.2e-09 67.8 151 50.3
Ah.13g076790 Amaranthus hybridus HOM05D003639 ORTHO05D004246 2.1e-09 67.0 155 45.2
COL.COLO4_24957 Corchorus olitorius HOM05D003639 ORTHO05D004246 2.7e-09 66.6 151 48.3
Prupe.7G050300 Prunus persica HOM05D003639 ORTHO05D004246 2.7e-09 66.6 60 63.3
Lj5g0008946 Lotus japonicus HOM05D003639 ORTHO05D004246 3.5e-09 66.2 152 44.7
Atru.chr1.1191 Acer truncatum HOM05D003639 ORTHO05D004246 4.6e-09 65.9 154 49.4
Sc19g0008460 Simmondsia chinensis HOM05D003639 ORTHO05D004246 1.0e-08 64.7 150 53.3
Glyma.02G190600 Glycine max HOM05D003639 ORTHO05D004246 1.3e-08 64.3 154 39.0
Nitab4.5_0000826g0140 Nicotiana tabacum HOM05D003639 ORTHO05D004246 1.3e-08 64.3 151 53.6
vmacro06312 Vaccinium macrocarpon HOM05D003639 ORTHO05D004246 2.3e-08 63.5 150 38.0
EL10Ac3g07157 Beta vulgaris HOM05D003639 ORTHO05D004246 3.0e-08 63.2 53 67.9
Peaxi162Scf00130g00929 Petunia axillaris HOM05D003639 ORTHO05D004246 3.9e-08 62.8 58 65.5
DCAR_014011 Daucus carota HOM05D003639 ORTHO05D004246 5.1e-08 62.4 57 61.4
MBI13_g04793_MAGBIO Magnolia biondii HOM05D003639 ORTHO05D004246 6.6e-08 62.0 157 58.0
Hund19126 Selenicereus undatus HOM05D003639 ORTHO05D004246 6.6e-08 62.0 53 64.2
Medtr3g045130 Medicago truncatula HOM05D003639 ORTHO05D004246 8.6e-08 61.6 150 36.0
PGR004G0521 Punica granatum HOM05D003639 ORTHO05D004246 8.6e-08 61.6 57 63.2
Nitab4.5_0001618g0260 Nicotiana tabacum HOM05D003639 ORTHO05D004246 1.1e-07 61.2 53 67.9
TWI74G0834 Tripterygium wilfordii HOM05D003639 ORTHO05D004246 1.5e-07 60.8 60 61.7
Gohir.A12G015000 Gossypium hirsutum HOM05D003639 ORTHO05D004246 3.3e-07 59.7 151 46.4
arahy.Tifrunner.gnm1.ann1.Y8CJQK Arachis hypogaea HOM05D003639 ORTHO05D004246 4.3e-07 59.3 151 55.6
Ca_25791_v3 Cicer arietinum L. HOM05D003639 ORTHO05D004246 4.3e-07 59.3 82 53.7
MD12G1086300 Malus domestica HOM05D003639 ORTHO05D004246 4.3e-07 59.3 60 60.0
Cpa.g.sc120.6 Carica papaya HOM05D003639 ORTHO05D004246 5.6e-07 58.9 157 38.2
Rhsim03G0032000 Rhododendron simsii HOM05D003639 ORTHO05D004246 7.3e-07 58.5 157 45.2
Migut.J01707 Erythranthe guttata HOM05D003639 ORTHO05D004246 9.6e-07 58.2 61 59.0
MSTRG.6401 Avicennia marina HOM05D003639 ORTHO05D004246 1.2e-06 57.8 143 35.7
Potri.016G042250 Populus trichocarpa HOM05D003639 ORTHO05D004246 1.2e-06 57.8 150 32.7
AUR62024528 Chenopodium quinoa HOM05D003639 ORTHO05D004246 1.6e-06 57.4 157 36.9
TPR.G1512 Trifolium pratense HOM05D003639 ORTHO05D004246 2.1e-06 57.0 59 61.0
arahy.Tifrunner.gnm1.ann1.6W6BYV Arachis hypogaea HOM05D003639 ORTHO05D004246 2.8e-06 56.6 151 55.6
Gorai.008G015500 Gossypium raimondii HOM05D003639 ORTHO05D004246 4.7e-06 55.8 142 46.5
AUR62026120 Chenopodium quinoa HOM05D003639 ORTHO05D004246 8.1e-06 55.1 159 47.2
Gohir.D12G015400 Gossypium hirsutum HOM05D003639 ORTHO05D004246 8.1e-06 55.1 150 47.3
Psat6g009840 Pisum sativum HOM05D003639 ORTHO05D004246 8.1e-06 55.1 153 49.7


User provided reference genes

Program Settings