Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp7g08260 Schrenkiella parvula HOM05D006705 ORTHO05D008179 2.0e-162 577.0 310 100.0
Thhalv10027665m.g Eutrema salsugineum HOM05D006705 ORTHO05D008179 5.7e-146 522.3 311 91.3
A03p65890 Brassica napus HOM05D006705 ORTHO05D008179 3.6e-140 503.1 311 85.5
BraA03t15643Z Brassica rapa HOM05D006705 ORTHO05D008179 3.6e-140 503.1 311 85.5
BcaC02g10761 Brassica carinata HOM05D006705 ORTHO05D008179 6.1e-140 502.3 310 86.5
C04p25410 Brassica napus HOM05D006705 ORTHO05D008179 6.1e-140 502.3 310 86.5
BolC4t24049H Brassica oleracea HOM05D006705 ORTHO05D008179 6.1e-140 502.3 310 86.5
AT5G42310 Arabidopsis thaliana HOM05D006705 ORTHO05D008179 3.1e-131 473.4 313 83.4
BcaC06g31759 Brassica carinata HOM05D006705 ORTHO05D008179 2.6e-130 470.3 310 84.2
Aa31LG9G12430 Aethionema arabicum HOM05D006705 ORTHO05D008179 1.3e-126 458.0 320 78.8
AL8G19290 Arabidopsis lyrata HOM05D006705 ORTHO05D008179 8.6e-126 455.3 316 82.0
Carub.0008s0687 Capsella rubella HOM05D006705 ORTHO05D008179 3.3e-125 453.4 312 82.4
CARHR284920 Cardamine hirsuta HOM05D006705 ORTHO05D008179 1.4e-123 448.0 310 79.0
THA.LOC104825423 Tarenaya hassleriana HOM05D006705 ORTHO05D008179 3.5e-111 406.8 316 69.9
Cpa.g.sc26.199 Carica papaya HOM05D006705 ORTHO05D008179 6.0e-103 379.4 310 66.1
ClCG08G009460 Citrullus lanatus HOM05D006705 ORTHO05D008179 5.1e-94 349.7 331 60.1
Manes.05G134500 Manihot esculenta HOM05D006705 ORTHO05D008179 9.6e-93 345.5 248 71.8
Haze_22772 Corylus avellana HOM05D006705 ORTHO05D008179 1.3e-92 345.1 317 62.8
Dinv05535 Davidia involucrata HOM05D006705 ORTHO05D008179 1.3e-92 345.1 313 62.3
QL02p014030 Quercus lobata HOM05D006705 ORTHO05D008179 1.3e-92 345.1 315 62.9
Cfa014075 Carpinus fangiana HOM05D006705 ORTHO05D008179 2.1e-92 344.4 314 62.4
CsaV3_6G031600 Cucumis sativus L. HOM05D006705 ORTHO05D008179 2.8e-92 344.0 335 60.0
Atru.chr13.134 Acer truncatum HOM05D006705 ORTHO05D008179 8.1e-92 342.4 292 65.8
Sabra05G0193800 Salix brachista HOM05D006705 ORTHO05D008179 1.1e-91 342.0 315 61.3
Gorai.002G117100 Gossypium raimondii HOM05D006705 ORTHO05D008179 4.0e-91 340.1 237 73.8
Thecc.08G058800 Theobroma cacao HOM05D006705 ORTHO05D008179 1.5e-90 338.2 237 74.3
Sed0011006 Sechium edule HOM05D006705 ORTHO05D008179 2.0e-90 337.8 232 73.3
COL.COLO4_06661 Corchorus olitorius HOM05D006705 ORTHO05D008179 4.5e-90 336.7 314 65.6
Gohir.D01G092000 Gossypium hirsutum HOM05D006705 ORTHO05D008179 4.5e-90 336.7 237 73.0
CiPaw.08G072900 Carya illinoinensis HOM05D006705 ORTHO05D008179 1.3e-89 335.1 317 61.2
MELO3C026541.2 Cucumis melo HOM05D006705 ORTHO05D008179 3.8e-89 333.6 333 57.4
Actinidia15490 Actinidia chinensis HOM05D006705 ORTHO05D008179 1.1e-88 332.0 313 60.1
Gohir.A01G105700 Gossypium hirsutum HOM05D006705 ORTHO05D008179 3.2e-88 330.5 237 71.7
arahy.Tifrunner.gnm1.ann1.1DQJ64 Arachis hypogaea HOM05D006705 ORTHO05D008179 5.5e-88 329.7 230 71.3
CANSAT25G1831 Cannabis sativa HOM05D006705 ORTHO05D008179 7.1e-88 329.3 234 73.5
RcHm_v2.0_Chr6g0304261 Rosa chinensis HOM05D006705 ORTHO05D008179 9.3e-88 328.9 246 71.5
GSVIVG01013362001 Vitis vinifera HOM05D006705 ORTHO05D008179 1.2e-87 328.6 317 59.0
arahy.Tifrunner.gnm1.ann1.A2XG10 Arachis hypogaea HOM05D006705 ORTHO05D008179 1.6e-87 328.2 230 72.6
Prupe.1G354600 Prunus persica HOM05D006705 ORTHO05D008179 2.7e-87 327.4 232 72.8
Ciclev10000451m.g Citrus clementina HOM05D006705 ORTHO05D008179 3.5e-87 327.0 319 58.6
Potri.005G250200 Populus trichocarpa HOM05D006705 ORTHO05D008179 3.5e-87 327.0 318 59.4
FAN27G0286 Fragaria x ananassa HOM05D006705 ORTHO05D008179 1.3e-86 325.1 316 60.1
CSS0004504 Camellia sinensis var. sinensis HOM05D006705 ORTHO05D008179 2.3e-86 324.3 250 68.0
CSS0019684 Camellia sinensis var. sinensis HOM05D006705 ORTHO05D008179 2.3e-86 324.3 250 68.0
Glyma.06G018300 Glycine max HOM05D006705 ORTHO05D008179 2.3e-86 324.3 239 68.6
FvH4_2g37460 Fragaria vesca HOM05D006705 ORTHO05D008179 5.1e-86 323.2 316 59.5
FAN15G2229 Fragaria x ananassa HOM05D006705 ORTHO05D008179 6.7e-86 322.8 321 58.6
Nitab4.5_0025577g0010 Nicotiana tabacum HOM05D006705 ORTHO05D008179 1.1e-85 322.0 312 57.1
Nn5g30939 Nelumbo nucifera HOM05D006705 ORTHO05D008179 1.9e-85 321.2 309 57.9
Nitab4.5_0000337g0230 Nicotiana tabacum HOM05D006705 ORTHO05D008179 1.9e-85 321.2 312 56.7
TAR376G0550 Trochodendron aralioides HOM05D006705 ORTHO05D008179 2.5e-85 320.9 235 70.2
VMungo1309G2580 Vigna mungo HOM05D006705 ORTHO05D008179 2.5e-85 320.9 231 70.1
Phvul.009G010700 Phaseolus vulgaris HOM05D006705 ORTHO05D008179 5.6e-85 319.7 255 65.5
Potri.002G010900 Populus trichocarpa HOM05D006705 ORTHO05D008179 1.6e-84 318.2 316 56.0
Hma1.2p1_0507F.1_g168450 Hydrangea macrophylla HOM05D006705 ORTHO05D008179 2.1e-84 317.8 240 67.5
MD12G1003200 Malus domestica HOM05D006705 ORTHO05D008179 2.1e-84 317.8 253 67.2
Medtr3g115270 Medicago truncatula HOM05D006705 ORTHO05D008179 4.8e-84 316.6 316 55.4
Psat5g159080 Pisum sativum HOM05D006705 ORTHO05D008179 6.2e-84 316.2 244 66.8
Hund05113 Selenicereus undatus HOM05D006705 ORTHO05D008179 1.4e-83 315.1 294 58.8
Glyma.04G018000 Glycine max HOM05D006705 ORTHO05D008179 3.1e-83 313.9 242 67.8
Lalb_Chr11g0061641 Lupinus albus HOM05D006705 ORTHO05D008179 3.1e-83 313.9 231 68.8
CAN.G985.2 Capsicum annuum HOM05D006705 ORTHO05D008179 4.0e-83 313.5 315 56.8
Lj1g0004605 Lotus japonicus HOM05D006705 ORTHO05D008179 4.0e-83 313.5 247 66.8
Ca_15434_v3 Cicer arietinum L. HOM05D006705 ORTHO05D008179 5.3e-83 313.2 243 66.3
Ca_15459_v3 Cicer arietinum L. HOM05D006705 ORTHO05D008179 5.3e-83 313.2 243 66.3
MD15G1002100 Malus domestica HOM05D006705 ORTHO05D008179 4.5e-82 310.1 232 69.8
Aqoxy5G01043 Aquilegia oxysepala HOM05D006705 ORTHO05D008179 1.7e-81 308.1 319 58.3
AUR62036875 Chenopodium quinoa HOM05D006705 ORTHO05D008179 1.7e-81 308.1 236 66.9
Lsat_1_v5_gn_9_45140 Lactuca sativa HOM05D006705 ORTHO05D008179 1.7e-81 308.1 311 57.2
Sabra02G0008200 Salix brachista HOM05D006705 ORTHO05D008179 2.2e-81 307.8 230 66.5
Peaxi162Scf00400g00113 Petunia axillaris HOM05D006705 ORTHO05D008179 2.9e-81 307.4 244 65.2
PGSC0003DMG400011663 Solanum tuberosum HOM05D006705 ORTHO05D008179 2.9e-81 307.4 246 65.4
PSO170G2138 Papaver somniferum HOM05D006705 ORTHO05D008179 8.4e-81 305.8 241 65.1
vmacro21812 Vaccinium macrocarpon HOM05D006705 ORTHO05D008179 1.1e-80 305.4 314 55.1
DCAR_013913 Daucus carota HOM05D006705 ORTHO05D008179 1.4e-80 305.1 312 56.1
Rhsim06G0007500 Rhododendron simsii HOM05D006705 ORTHO05D008179 4.2e-80 303.5 250 63.6
AUR62043173 Chenopodium quinoa HOM05D006705 ORTHO05D008179 5.5e-80 303.1 236 66.1
PSO210G3824 Papaver somniferum HOM05D006705 ORTHO05D008179 5.5e-80 303.1 241 63.9
TPR.G38137 Trifolium pratense HOM05D006705 ORTHO05D008179 9.3e-80 302.4 243 65.4
EL10Ac1g01967 Beta vulgaris HOM05D006705 ORTHO05D008179 2.7e-79 300.8 245 63.7
Cc10_g00680 Coffea canephora HOM05D006705 ORTHO05D008179 7.9e-79 299.3 312 55.1
MSTRG.1107 Avicennia marina HOM05D006705 ORTHO05D008179 3.9e-78 297.0 252 61.1
HanXRQChr05g0146791 Helianthus annuus HOM05D006705 ORTHO05D008179 3.9e-78 297.0 242 64.0
Migut.C00960 Erythranthe guttata HOM05D006705 ORTHO05D008179 5.1e-78 296.6 249 62.2
Oeu007482.1 Olea europaea HOM05D006705 ORTHO05D008179 6.7e-78 296.2 245 62.9
Solyc08g045850.3 Solanum lycopersicum HOM05D006705 ORTHO05D008179 8.7e-78 295.8 232 66.4
Sopen08g014170 Solanum pennellii HOM05D006705 ORTHO05D008179 1.1e-77 295.4 231 66.7
CDE02G1751 Ceratophyllum demersum HOM05D006705 ORTHO05D008179 5.7e-77 293.1 208 70.2
Lsat_1_v5_gn_8_26180 Lactuca sativa HOM05D006705 ORTHO05D008179 1.1e-75 288.9 260 60.4
SalBow7G0522 Salvia bowleyana HOM05D006705 ORTHO05D008179 6.9e-75 286.2 243 61.7
PGR031G2749 Punica granatum HOM05D006705 ORTHO05D008179 9.0e-75 285.8 315 54.9
SGA_v2.0_scaffold108G30860 Striga asiatica HOM05D006705 ORTHO05D008179 2.6e-74 284.3 230 63.0
Ah.11g041180 Amaranthus hybridus HOM05D006705 ORTHO05D008179 1.7e-73 281.6 246 61.4
CDE04G2934 Ceratophyllum demersum HOM05D006705 ORTHO05D008179 1.7e-73 281.6 283 56.9
Sc15g0004450 Simmondsia chinensis HOM05D006705 ORTHO05D008179 1.4e-72 278.5 309 51.1
ECA232G0132 Erigeron canadensis HOM05D006705 ORTHO05D008179 1.6e-71 275.0 233 60.5
HanXRQChr12g0367581 Helianthus annuus HOM05D006705 ORTHO05D008179 1.5e-69 268.5 262 55.7
ECA233G5787 Erigeron canadensis HOM05D006705 ORTHO05D008179 2.8e-68 264.2 260 55.0
Lj4A11G70 Lonicera japonica HOM05D006705 ORTHO05D008179 2.2e-60 238.0 154 77.3
Eucgr.F03553 Eucalyptus grandis HOM05D006705 ORTHO05D008179 6.5e-57 226.5 163 73.6
FAN20G2687 Fragaria x ananassa HOM05D000148 ORTHO05D008179 1.6e-47 195.3 149 65.1
MBI08_g41522_MAGBIO Magnolia biondii HOM05D006705 ORTHO05D008179 8.0e-47 193.0 249 49.8
HPP92_000875 Vanilla planifolia HOM05D006705 ORTHO05D008179 7.7e-42 176.4 241 43.6
ATR0661G389 Amborella trichopoda HOM05D006705 ORTHO05D008179 7.0e-35 153.3 197 43.7
SEGI_04333 Sequoiadendron giganteum HOM05D006705 ORTHO05D000002 5.5e-32 143.7 189 45.0
AagrBONN_evm.TU.Sc2ySwM_362.1316 Anthoceros agrestis HOM05D006705 ORTHO05D008179 2.3e-22 111.7 185 34.1
Mapoly0048s0090 Marchantia polymorpha HOM05D006705 ORTHO05D008179 2.3e-22 111.7 201 35.3
Zm00001eb323580 Zea mays HOM05D006705 ORTHO05D008179 7.5e-21 106.7 242 33.9
SMO180G0012 Selaginella moellendorffii HOM05D006705 ORTHO05D008179 4.9e-20 104.0 172 35.5
Os07g0548300 Oryza sativa ssp. japonica HOM05D006705 ORTHO05D008179 1.4e-19 102.4 237 32.9
Eucgr.F03554 Eucalyptus grandis HOM05D006705 ORTHO05D008179 3.2e-11 74.7 41 85.4
BcaNung05253 Brassica carinata HOM05D006705 ORTHO05D008179 4.6e-10 70.9 43 83.7
FvH4_5g30181 Fragaria vesca HOM05D006705 ORTHO05D008179 1.3e-09 69.3 58 56.9
Gohir.D06G036701 Gossypium hirsutum HOM05D006705 ORTHO05D008179 1.3e-09 69.3 41 75.6
Gorai.010G041000 Gossypium raimondii HOM05D006705 ORTHO05D008179 1.3e-09 69.3 41 75.6
Nitab4.5_0002710g0130 Nicotiana tabacum HOM05D006705 ORTHO05D008179 1.3e-09 69.3 40 75.0
CDE02G4098 Ceratophyllum demersum HOM05D006705 ORTHO05D008179 8.6e-09 66.6 39 76.9
Pp3c11_21930 Physcomitrium patens HOM05D006705 ORTHO05D008179 1.2e-07 62.8 199 26.6
Gohir.D05G336850 Gossypium hirsutum HOM05D006705 ORTHO05D008179 2.1e-07 62.0 37 75.7
Nn6g35263 Nelumbo nucifera HOM05D000001 ORTHO05D000003 5.2e-06 57.4 181 28.2
Gohir.D06G157800 Gossypium hirsutum HOM05D000485 ORTHO05D000341 6.8e-06 57.0 37 70.3
AUR62037373 Chenopodium quinoa HOM05D002479 ORTHO05D002675 8.9e-06 56.6 104 31.7
AUR62038945 Chenopodium quinoa HOM05D002479 ORTHO05D002675 8.9e-06 56.6 104 31.7


User provided reference genes

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