Gene: Ah.11g041180

General Information

Structural Information

  • Species Amaranthus hybridus
  • Gene Identifier Ah.11g041180
  • Transcript Identifier Ah.11g041180-v1.1.a1
  • Gene Type Coding gene
  • Location AmaHy_arrow1_Scaffold_11 : 5688473-5691020 : negative

Gene Family Information

  • ID HOM05D006705
  • #Genes/#Species 120/92
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Ah.11g041180-v1.1.a1

Descriptions

  • Description Pentatricopeptide repeat-containing protein At5g42310, chloroplastic (Protein CRP1 homolog) (AtCRP1)
  • note Pentatricopeptide repeat-containing protein At5g42310, chloroplastic (Protein CRP1 homolog) (AtCRP1)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0045727
ISO
PLAZA Integrative Orthologypositive regulation of translation Zm00001eb323580
GO:0010239
ISO
PLAZA Integrative Orthologychloroplast mRNA processing AT5G42310
GO:0009658
ISO
PLAZA Integrative Orthologychloroplast organization AT5G42310

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding
GO:0003727
ISO
PLAZA Integrative Orthologysingle-stranded RNA binding AT5G42310
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding Zm00001eb323580

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009570
ISO
PLAZA Integrative Orthologychloroplast stroma Zm00001eb323580
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT5G42310
GO:0042651
ISO
PLAZA Integrative Orthologythylakoid membrane AT5G42310
GO:0042644
ISO
PLAZA Integrative Orthologychloroplast nucleoid AT5G42310

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR011990 Tetratricopeptide-like helical domain superfamily
IPR002885 Pentatricopeptide repeat
Mapman id Description
16.11.5.2 RNA processing.organelle machinery.post-transcriptional gene expression regulation.plastidial mRNA processing factor (CRP1)