Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp5g24310 Schrenkiella parvula HOM05D003810 ORTHO05D004416 0.0e+00 1160.6 592 100.0
BcaB05g24435 Brassica carinata HOM05D003810 ORTHO05D004416 8.1e-312 1073.2 592 92.1
BcaC03g15064 Brassica carinata HOM05D003810 ORTHO05D004416 8.3e-308 1059.7 593 91.4
C02p26210 Brassica napus HOM05D003810 ORTHO05D004416 1.2e-306 1055.8 593 91.1
BolC2t08687H Brassica oleracea HOM05D003810 ORTHO05D004416 1.2e-306 1055.8 593 91.1
A02p15760 Brassica napus HOM05D003810 ORTHO05D004416 1.6e-303 1045.4 594 90.6
BraA02t06637Z Brassica rapa HOM05D003810 ORTHO05D004416 1.4e-302 1042.3 594 90.1
AL1G63840 Arabidopsis lyrata HOM05D003810 ORTHO05D004416 2.4e-302 1041.6 588 91.2
Thhalv10011333m.g Eutrema salsugineum HOM05D003810 ORTHO05D004416 1.9e-299 1031.9 589 90.2
Carub.0001s4426 Capsella rubella HOM05D003810 ORTHO05D004416 2.7e-298 1028.1 588 89.5
CARHR045410 Cardamine hirsuta HOM05D003810 ORTHO05D004416 6.0e-298 1026.9 588 89.3
Aa31LG10G490 Aethionema arabicum HOM05D003810 ORTHO05D004416 1.2e-293 1012.7 588 87.8
AT3G61420 Arabidopsis thaliana HOM05D003810 ORTHO05D004416 1.5e-288 995.7 574 87.8
AL5G43720 Arabidopsis lyrata HOM05D003810 ORTHO05D004416 9.9e-277 956.4 574 86.2
AT1G55750 Arabidopsis thaliana HOM05D003810 ORTHO05D004416 3.1e-270 934.9 516 91.9
THA.LOC104815683 Tarenaya hassleriana HOM05D003810 ORTHO05D004416 3.6e-258 894.8 590 78.6
Thecc.09G267400 Theobroma cacao HOM05D003810 ORTHO05D004416 1.2e-210 736.9 591 64.1
Cpa.g.sc181.12 Carica papaya HOM05D003810 ORTHO05D004416 1.6e-210 736.5 553 68.5
Gohir.D07G118250 Gossypium hirsutum HOM05D003810 ORTHO05D004416 5.8e-208 728.0 594 62.6
Duzib150G1314 Durio zibethinus HOM05D003810 ORTHO05D004416 2.9e-207 725.7 594 63.6
Gorai.001G127200 Gossypium raimondii HOM05D003810 ORTHO05D004416 7.0e-206 721.1 595 62.4
COL.COLO4_25217 Corchorus olitorius HOM05D003810 ORTHO05D004416 4.0e-201 705.3 588 62.1
Ciclev10007802m.g Citrus clementina HOM05D003810 ORTHO05D004416 5.2e-201 704.9 596 61.7
RcHm_v2.0_Chr7g0221221 Rosa chinensis HOM05D003810 ORTHO05D004416 1.2e-200 703.7 587 63.2
CANSAT11G0157 Cannabis sativa HOM05D003810 ORTHO05D004416 7.5e-200 701.0 596 61.9
GSVIVG01014785001 Vitis vinifera HOM05D003810 ORTHO05D004416 2.2e-199 699.5 600 62.0
Eucgr.J01409 Eucalyptus grandis HOM05D003810 ORTHO05D004416 1.3e-196 690.3 580 60.7
Cfa016940 Carpinus fangiana HOM05D003810 ORTHO05D004416 5.6e-195 684.9 606 60.1
MELO3C020474.2 Cucumis melo HOM05D003810 ORTHO05D004416 1.2e-194 683.7 593 61.2
CSS0024914 Camellia sinensis var. sinensis HOM05D003810 ORTHO05D004416 1.6e-194 683.3 599 60.9
Sed0019869 Sechium edule HOM05D003810 ORTHO05D004416 3.6e-194 682.2 596 60.4
CsaV3_4G027560 Cucumis sativus L. HOM05D003810 ORTHO05D004416 1.4e-193 680.2 593 60.7
FAN04G0096 Fragaria x ananassa HOM05D003810 ORTHO05D004416 3.1e-193 679.1 587 62.9
QL08p001596 Quercus lobata HOM05D003810 ORTHO05D004416 6.8e-193 677.9 611 60.1
Atru.chr2.3847 Acer truncatum HOM05D003810 ORTHO05D004416 1.5e-192 676.8 598 60.0
Rhsim04G0009500 Rhododendron simsii HOM05D003810 ORTHO05D004416 5.8e-192 674.9 600 60.2
Sc14g0003560 Simmondsia chinensis HOM05D003810 ORTHO05D004416 4.6e-189 665.2 598 58.9
Hma1.2p1_0193F.1_g084130 Hydrangea macrophylla HOM05D003810 ORTHO05D004416 7.8e-189 664.5 620 58.5
HanXRQChr05g0160211 Helianthus annuus HOM05D003810 ORTHO05D004416 1.7e-188 663.3 588 59.7
MSTRG.13036 Avicennia marina HOM05D003810 ORTHO05D004416 1.9e-187 659.8 598 59.4
Atru.chr12.1053 Acer truncatum HOM05D003810 ORTHO05D004416 3.3e-187 659.1 584 59.6
PGR042G2745 Punica granatum HOM05D003810 ORTHO05D004416 2.1e-186 656.4 584 59.2
MD15G1441400 Malus domestica HOM05D003810 ORTHO05D004416 4.0e-185 652.1 587 60.1
Nitab4.5_0001622g0070 Nicotiana tabacum HOM05D003810 ORTHO05D004416 2.2e-183 646.4 594 58.2
Nitab4.5_0000611g0250 Nicotiana tabacum HOM05D003810 ORTHO05D004416 2.4e-182 642.9 594 57.9
FAN08G2973 Fragaria x ananassa HOM05D003810 ORTHO05D004416 3.2e-182 642.5 587 60.1
Peaxi162Scf00212g00616 Petunia axillaris HOM05D003810 ORTHO05D004416 4.2e-182 642.1 597 57.3
FAN18G3759 Fragaria x ananassa HOM05D003810 ORTHO05D004416 7.1e-182 641.3 710 52.4
Dinv40895 Davidia involucrata HOM05D003810 ORTHO05D004416 1.2e-181 640.6 574 59.8
Cc00_g20590 Coffea canephora HOM05D003810 ORTHO05D004416 2.3e-180 636.3 595 58.5
BcaB07g33855 Brassica carinata HOM05D003810 ORTHO05D004416 3.9e-180 635.6 562 63.9
CAN.G492.44 Capsicum annuum HOM05D003810 ORTHO05D004416 3.9e-180 635.6 597 57.3
TPR.G13386 Trifolium pratense HOM05D003810 ORTHO05D004416 5.1e-180 635.2 585 57.6
Haze_09895 Corylus avellana HOM05D003810 ORTHO05D004416 1.1e-179 634.0 631 56.1
Prupe.1G583500 Prunus persica HOM05D003810 ORTHO05D004416 1.5e-179 633.6 607 57.2
Sopen10g001850 Solanum pennellii HOM05D003810 ORTHO05D004416 5.6e-179 631.7 597 57.1
CiPaw.11G208700 Carya illinoinensis HOM05D003810 ORTHO05D004416 9.6e-179 630.9 598 56.7
PSO063G0853 Papaver somniferum HOM05D003810 ORTHO05D004416 9.6e-179 630.9 600 56.2
Medtr1g090110 Medicago truncatula HOM05D003810 ORTHO05D004416 1.2e-178 630.6 594 56.7
Solyc10g005900.3 Solanum lycopersicum HOM05D003810 ORTHO05D004416 1.2e-178 630.6 597 57.0
PSO782G5597 Papaver somniferum HOM05D003810 ORTHO05D004416 3.6e-178 629.0 600 55.8
Actinidia00838 Actinidia chinensis HOM05D003810 ORTHO05D004416 4.7e-178 628.6 555 60.4
TWI23G0485 Tripterygium wilfordii HOM05D003810 ORTHO05D004416 3.1e-177 625.9 590 57.3
vmacro22299 Vaccinium macrocarpon HOM05D003810 ORTHO05D004416 5.3e-177 625.2 732 50.1
Ca_10408_v3 Cicer arietinum L. HOM05D003810 ORTHO05D004416 1.7e-175 620.2 615 54.1
Migut.H01729 Erythranthe guttata HOM05D003810 ORTHO05D004416 2.2e-175 619.8 584 56.7
Manes.02G224100 Manihot esculenta HOM05D003810 ORTHO05D004416 2.9e-175 619.4 550 60.4
Lj5g0018758 Lotus japonicus HOM05D003810 ORTHO05D004416 6.4e-175 618.2 586 56.1
AUR62017624 Chenopodium quinoa HOM05D003810 ORTHO05D004416 1.1e-174 617.5 586 58.2
MBI15_g00877_MAGBIO Magnolia biondii HOM05D003810 ORTHO05D004416 1.9e-174 616.7 604 56.5
ClCG04G003010 Citrullus lanatus HOM05D003810 ORTHO05D004416 5.4e-174 615.1 594 56.9
Thhalv10011448m.g Eutrema salsugineum HOM05D003810 ORTHO05D004416 1.6e-173 613.6 543 65.6
ECA246G2898 Erigeron canadensis HOM05D003810 ORTHO05D004416 2.1e-173 613.2 592 55.4
Phvul.007G134900 Phaseolus vulgaris HOM05D003810 ORTHO05D004416 2.1e-173 613.2 594 55.7
Psat6g170400 Pisum sativum HOM05D003810 ORTHO05D004416 6.0e-173 611.7 594 56.2
FvH4_5g28910 Fragaria vesca HOM05D003810 ORTHO05D004416 3.9e-172 609.0 528 61.7
Sabra07G0088100 Salix brachista HOM05D003810 ORTHO05D004416 5.1e-172 608.6 660 52.4
VMungo0720G2836 Vigna mungo HOM05D003810 ORTHO05D004416 1.9e-171 606.7 594 55.7
ATR0751G036 Amborella trichopoda HOM05D003810 ORTHO05D004416 4.3e-171 605.5 601 53.2
arahy.Tifrunner.gnm1.ann1.KKS8QY Arachis hypogaea HOM05D003810 ORTHO05D004416 8.1e-170 601.3 586 56.0
Glyma.20G197500 Glycine max HOM05D003810 ORTHO05D004416 2.4e-169 599.7 586 54.3
Lsat_1_v5_gn_1_66020 Lactuca sativa HOM05D003810 ORTHO05D004416 6.4e-167 591.7 595 55.5
DCAR_017597 Daucus carota HOM05D003810 ORTHO05D004416 1.9e-166 590.1 603 54.1
vmacro09609 Vaccinium macrocarpon HOM05D003810 ORTHO05D004416 1.9e-166 590.1 699 49.5
Aqoxy3G00950 Aquilegia oxysepala HOM05D003810 ORTHO05D004416 5.4e-166 588.6 591 53.3
Ah.01g013210 Amaranthus hybridus HOM05D003810 ORTHO05D004416 9.3e-166 587.8 542 59.8
Medtr6g071555 Medicago truncatula HOM05D003810 ORTHO05D004416 9.3e-166 587.8 595 54.8
Oeu062684.4 Olea europaea HOM05D003810 ORTHO05D004416 2.7e-165 586.3 695 50.4
Nn2g14662 Nelumbo nucifera HOM05D003810 ORTHO05D004416 1.8e-164 583.6 602 54.2
CARHR219980 Cardamine hirsuta HOM05D003810 ORTHO05D004416 8.1e-162 574.7 369 81.3
EL10Ac9g22878 Beta vulgaris HOM05D003810 ORTHO05D004416 2.9e-159 566.2 608 52.8
Os08g0338200 Oryza sativa ssp. japonica HOM05D003810 ORTHO05D004416 8.4e-159 564.7 601 50.2
arahy.Tifrunner.gnm1.ann1.60T2A8 Arachis hypogaea HOM05D003810 ORTHO05D004416 1.1e-158 564.3 586 53.8
Aqoxy2G00893 Aquilegia oxysepala HOM05D003810 ORTHO05D004416 1.9e-158 563.5 593 53.3
Lj3A773G17 Lonicera japonica HOM05D003810 ORTHO05D004416 9.3e-158 561.2 608 53.6
unitig_61.g26129 Utricularia gibba HOM05D003810 ORTHO05D004416 4.3e-155 552.4 579 54.1
HPP92_028601 Vanilla planifolia HOM05D003810 ORTHO05D004416 9.6e-155 551.2 597 51.3
AUR62015172 Chenopodium quinoa HOM05D003810 ORTHO05D004416 1.3e-154 550.8 586 54.3
Glyma.10G193000 Glycine max HOM05D003810 ORTHO05D004416 2.1e-154 550.1 586 51.9
Potri.007G107400 Populus trichocarpa HOM05D003810 ORTHO05D004416 2.1e-154 550.1 529 56.5
CDE04G2581 Ceratophyllum demersum HOM05D003810 ORTHO05D004416 1.6e-149 533.9 604 51.0
SGA_v2.0_scaffold42G15939 Striga asiatica HOM05D003810 ORTHO05D004416 8.7e-148 528.1 649 48.7
Duzib168G0397 Durio zibethinus HOM05D003810 ORTHO05D004416 5.7e-147 525.4 427 63.7
Lsat_1_v5_gn_9_33460 Lactuca sativa HOM05D003810 ORTHO05D004416 1.6e-146 523.9 474 60.3
BcaC08g42928 Brassica carinata HOM05D003810 ORTHO05D004416 6.3e-146 521.9 482 63.1
FAN14G4445 Fragaria x ananassa HOM05D003810 ORTHO05D004416 2.4e-145 520.0 594 50.7
Lj3C711T10 Lonicera japonica HOM05D003810 ORTHO05D004416 2.4e-145 520.0 475 59.4
Dinv10375 Davidia involucrata HOM05D003810 ORTHO05D004416 5.5e-134 482.3 602 48.7
SGA_v2.0_scaffold146G36126 Striga asiatica HOM05D003810 ORTHO05D004416 2.1e-133 480.3 583 47.5
Aqoxy7G03331 Aquilegia oxysepala HOM05D003810 ORTHO05D004416 3.0e-132 476.5 474 53.6
Mapoly0009s0093 Marchantia polymorpha HOM05D003810 ORTHO05D004416 9.7e-131 471.5 593 45.4
Gohir.A07G114448 Gossypium hirsutum HOM05D003810 ORTHO05D004416 5.0e-127 459.1 354 65.0
Pp3c26_14480 Physcomitrium patens HOM05D003810 ORTHO05D004416 4.2e-126 456.1 588 42.0
FvH4_6g25000 Fragaria vesca HOM05D003810 ORTHO05D004416 3.6e-125 453.0 398 60.1
Lj1A897G41 Lonicera japonica HOM05D003810 ORTHO05D004416 1.1e-121 441.4 402 60.0
TAR629G3163 Trochodendron aralioides HOM05D003810 ORTHO05D004416 1.7e-119 434.1 438 56.4
AagrBONN_evm.TU.Sc2ySwM_117.3105 Anthoceros agrestis HOM05D003810 ORTHO05D004416 2.9e-119 433.3 598 43.3
Zm00001eb172700 Zea mays HOM05D003810 ORTHO05D004416 2.7e-117 426.8 465 49.7
Lalb_Chr06g0169751 Lupinus albus HOM05D003810 ORTHO05D004416 8.8e-116 421.8 388 57.7
TAR627G1185 Trochodendron aralioides HOM05D003810 ORTHO05D004416 3.1e-113 413.3 359 61.0
BolC6t35297H Brassica oleracea HOM05D003810 ORTHO05D004416 2.5e-110 403.7 312 69.9
Prupe.5G213500 Prunus persica HOM05D003810 ORTHO05D004416 1.2e-109 401.4 456 51.5
Potri.005G061432 Populus trichocarpa HOM05D003810 ORTHO05D004416 1.4e-105 387.9 356 59.3
CiPaw.14G066900 Carya illinoinensis HOM05D003810 ORTHO05D004416 4.4e-99 366.3 353 57.2
Prupe.5G046900 Prunus persica HOM05D003810 ORTHO05D004416 4.9e-98 362.8 460 47.4
SMO228G0023 Selaginella moellendorffii HOM05D003810 ORTHO05D004416 3.9e-95 353.2 596 37.6
QL04p000617 Quercus lobata HOM05D003810 ORTHO05D004416 2.5e-94 350.5 419 49.9
FAN02G0111 Fragaria x ananassa HOM05D003810 ORTHO05D004416 7.1e-81 305.8 473 42.7
MD08G1246300 Malus domestica HOM05D003810 ORTHO05D004416 7.8e-80 302.4 237 67.5
FAN02G0356 Fragaria x ananassa HOM05D003810 ORTHO05D004416 1.6e-77 294.7 438 43.2
FAN02G2818 Fragaria x ananassa HOM05D003810 ORTHO05D004416 2.6e-67 260.8 300 51.0
Gohir.A07G114432 Gossypium hirsutum HOM05D003810 ORTHO05D004416 8.4e-66 255.8 221 59.3
FAN05G0299 Fragaria x ananassa HOM05D003810 ORTHO05D010162 1.6e-64 251.5 208 65.4
Lj1A897G42 Lonicera japonica HOM05D003810 ORTHO05D004416 3.0e-63 247.3 201 65.7
FAN09G2262 Fragaria x ananassa HOM05D003810 ORTHO05D004416 6.6e-63 246.1 376 41.8
Lj3g0026478 Lotus japonicus HOM05D003810 ORTHO05D004416 5.8e-59 233.0 289 45.7
Potri.005G061366 Populus trichocarpa HOM05D003810 ORTHO05D004416 1.7e-58 231.5 204 57.4
RcHm_v2.0_Chr2g0090241 Rosa chinensis HOM05D003810 ORTHO05D004416 2.2e-58 231.1 498 37.6
SHI21694 Sapria himalayana HOM05D003810 ORTHO05D004416 4.9e-58 229.9 184 60.3
TAR627G1127 Trochodendron aralioides HOM05D003810 ORTHO05D004416 6.2e-53 213.0 163 65.0
Lalb_Chr06g0169761 Lupinus albus HOM05D003810 ORTHO05D004416 7.6e-51 206.1 198 54.0
CBR_g28523 Chara braunii HOM05D000019 ORTHO05D000002 2.9e-50 204.1 231 45.0
Hma1.2p1_2995F.1_g331440 Hydrangea macrophylla HOM05D003810 ORTHO05D004416 2.9e-50 204.1 355 41.4
CiPaw.14G066700 Carya illinoinensis HOM05D003810 ORTHO05D004416 3.7e-45 187.2 203 47.8
Rhsim05G0134800 Rhododendron simsii HOM05D003492 ORTHO05D005115 2.6e-43 181.0 303 41.3
CAN.G306.3 Capsicum annuum HOM05D003810 ORTHO05D004416 2.5e-41 174.5 166 56.6
MD08G1246400 Malus domestica HOM05D003810 ORTHO05D004416 2.5e-41 174.5 163 55.2
CAN.G306.2 Capsicum annuum HOM05D003810 ORTHO05D004416 1.6e-40 171.8 166 56.0
HPP92_016056 Vanilla planifolia HOM05D003810 ORTHO05D004416 3.9e-39 167.2 119 69.7
ECA233G1945 Erigeron canadensis HOM05D000449 ORTHO05D003939 5.7e-38 163.3 234 42.7
Hund17709 Selenicereus undatus HOM05D003810 ORTHO05D004416 5.9e-35 153.3 221 43.0
Hma1.2p1_2995F.1_g331430 Hydrangea macrophylla HOM05D003810 ORTHO05D004416 5.0e-34 150.2 197 47.7
Actinidia03659 Actinidia chinensis HOM05D003810 ORTHO05D004416 1.1e-25 122.5 134 50.0
SMO031G0001 Selaginella moellendorffii HOM05D003810 ORTHO05D004416 1.0e-23 115.9 128 41.4
TPR.G30194 Trifolium pratense HOM05D003810 ORTHO05D004416 1.7e-21 108.6 175 41.1
SGA_v2.0_scaffold126G33829 Striga asiatica HOM05D003810 ORTHO05D004416 3.1e-20 104.4 180 38.3
QL12p013194 Quercus lobata HOM05D003810 ORTHO05D004416 5.3e-20 103.6 184 39.1
CAN.G790.44 Capsicum annuum HOM05D000872 ORTHO05D000777 9.1e-20 102.8 80 62.5
PRCOL_00004489 Prasinoderma coloniale HOM05D003810 ORTHO05D004416 2.0e-19 101.7 541 23.8
SalBow3G3831 Salvia bowleyana HOM05D003810 ORTHO05D004416 1.7e-18 98.6 131 44.3
SHI21692 Sapria himalayana HOM05D003810 ORTHO05D004416 3.8e-18 97.4 94 51.1
MCO14G434 Micromonas commoda HOM05D003810 ORTHO05D004416 5.0e-18 97.1 627 22.8
TAR629G2180 Trochodendron aralioides HOM05D003810 ORTHO05D004416 5.0e-18 97.1 65 69.2
CAN.G1328.7 Capsicum annuum HOM05D003810 ORTHO05D004416 6.5e-18 96.7 76 63.2
CAN.G312.5 Capsicum annuum HOM05D003810 ORTHO05D000001 8.5e-18 96.3 73 64.4
Oeu005536.2 Olea europaea HOM05D003810 ORTHO05D004416 8.5e-18 96.3 164 37.2
CAN.G1057.19 Capsicum annuum HOM05D000222 ORTHO05D004416 4.2e-17 94.0 77 59.7
SHI21696 Sapria himalayana HOM05D003810 ORTHO05D004416 5.5e-17 93.6 116 45.7
CAN.G289.45 Capsicum annuum HOM05D002177 ORTHO05D004416 2.1e-16 91.7 80 56.2
ClCG09G022970 Citrullus lanatus HOM05D003810 ORTHO05D004416 5.1e-15 87.0 71 64.8
A07p35570 Brassica napus HOM05D003810 ORTHO05D004416 2.6e-14 84.7 67 70.1
Sabra05G0051600 Salix brachista HOM05D003810 ORTHO05D004416 5.7e-14 83.6 201 33.3
BraA07t31145Z Brassica rapa HOM05D003810 ORTHO05D004416 1.3e-13 82.4 61 73.8
SalBow3G0229 Salvia bowleyana HOM05D003810 ORTHO05D004416 1.1e-09 69.3 75 48.0
CAN.G479.68 Capsicum annuum HOM05D000222 ORTHO05D004387 1.5e-09 68.9 53 64.2
CAN.G11.19 Capsicum annuum HOM05D003810 ORTHO05D004416 2.5e-09 68.2 56 58.9
Hund08475 Selenicereus undatus HOM05D000185 ORTHO05D000105 3.2e-09 67.8 58 60.3
Thhalv10012232m.g Eutrema salsugineum HOM05D004280 ORTHO05D005059 1.2e-08 65.9 40 82.5
Cre10.g466550 Chlamydomonas reinhardtii HOM05D003810 ORTHO05D004416 2.7e-08 64.7 210 27.6
MD08G1246200 Malus domestica HOM05D003810 ORTHO05D004416 3.6e-08 64.3 77 44.2
Nitab4.5_0001303g0160 Nicotiana tabacum HOM05D003810 ORTHO05D004416 8.0e-08 63.2 75 46.7
Lsat_1_v5_gn_2_75840 Lactuca sativa HOM05D001134 ORTHO05D004416 1.4e-07 62.4 95 43.2
TPR.G30768 Trifolium pratense HOM05D003810 ORTHO05D004416 1.8e-07 62.0 62 51.6
CDE07G1690 Ceratophyllum demersum HOM05D003810 ORTHO05D004416 6.7e-07 60.1 125 37.6
Hund17711 Selenicereus undatus HOM05D003810 ORTHO05D004416 8.8e-07 59.7 44 65.9
MD08G1246500 Malus domestica HOM05D003810 ORTHO05D004416 2.0e-06 58.5 46 65.2


User provided reference genes

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