Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp5g22430 Schrenkiella parvula HOM05D005856 ORTHO05D007264 3.7e-274 947.6 473 100.0
AL2G26030 Arabidopsis lyrata HOM05D005856 ORTHO05D007264 1.1e-172 610.5 436 71.6
CARHR059980 Cardamine hirsuta HOM05D005856 ORTHO05D007264 7.2e-169 597.8 482 66.8
BcaB03g15198 Brassica carinata HOM05D005856 ORTHO05D007264 1.2e-168 597.0 483 67.3
Carub.0002s1377 Capsella rubella HOM05D005856 ORTHO05D007264 1.5e-166 590.1 483 66.3
AL2G26010 Arabidopsis lyrata HOM05D005856 ORTHO05D007264 2.2e-165 586.3 482 66.6
BraA07t31027Z Brassica rapa HOM05D005856 ORTHO05D007264 3.7e-165 585.5 485 66.0
Aa31sc1092G20 Aethionema arabicum HOM05D005856 ORTHO05D007264 4.8e-165 585.1 482 66.0
A07p34000 Brassica napus HOM05D005856 ORTHO05D007264 5.3e-164 581.6 485 66.2
BcaC08g46160 Brassica carinata HOM05D005856 ORTHO05D007264 6.9e-164 581.3 487 65.7
AT1G67440 Arabidopsis thaliana HOM05D005856 ORTHO05D007264 2.7e-160 569.3 483 65.0
THA.LOC104807593 Tarenaya hassleriana HOM05D005856 ORTHO05D007264 1.4e-159 567.0 482 64.5
Sp5g22410 Schrenkiella parvula HOM05D005856 ORTHO05D007264 1.7e-154 550.1 404 72.0
Thhalv10019531m.g Eutrema salsugineum HOM05D005856 ORTHO05D007264 3.0e-151 539.3 404 69.8
C06p42840 Brassica napus HOM05D005856 ORTHO05D007264 4.1e-148 528.9 487 61.2
BolC6t39153H Brassica oleracea HOM05D005856 ORTHO05D007264 5.3e-148 528.5 485 61.4
Cfa009330 Carpinus fangiana HOM05D005856 ORTHO05D007264 4.4e-142 508.8 490 56.1
CARHR068030 Cardamine hirsuta HOM05D005856 ORTHO05D007264 7.5e-142 508.1 465 60.4
Manes.13G018400 Manihot esculenta HOM05D005856 ORTHO05D007264 1.7e-141 506.9 450 59.8
Actinidia20701 Actinidia chinensis HOM05D005856 ORTHO05D007264 1.6e-139 500.4 488 56.4
CSS0025471 Camellia sinensis var. sinensis HOM05D005856 ORTHO05D007264 2.0e-139 500.0 493 55.2
Sopen05g010580 Solanum pennellii HOM05D005856 ORTHO05D007264 2.3e-138 496.5 451 58.1
ClCG08G010110 Citrullus lanatus HOM05D005856 ORTHO05D007264 3.8e-138 495.7 503 54.9
PGSC0003DMG400015053 Solanum tuberosum HOM05D005856 ORTHO05D007264 6.5e-138 495.0 446 57.8
Haze_12395 Corylus avellana HOM05D005856 ORTHO05D007264 1.9e-137 493.4 466 56.4
Solyc05g015310.3 Solanum lycopersicum HOM05D005856 ORTHO05D007264 1.9e-137 493.4 451 57.9
CsaV3_6G032280 Cucumis sativus L. HOM05D005856 ORTHO05D007264 2.5e-137 493.0 504 55.2
Thecc.02G210800 Theobroma cacao HOM05D005856 ORTHO05D007264 3.3e-137 492.7 487 55.6
CANSAT01G0688 Cannabis sativa HOM05D005856 ORTHO05D007264 7.2e-137 491.5 451 58.5
COL.COLO4_20381 Corchorus olitorius HOM05D005856 ORTHO05D007264 1.6e-136 490.3 493 54.8
MELO3C011452.2 Cucumis melo HOM05D005856 ORTHO05D007264 1.6e-136 490.3 503 54.5
Thhalv10019423m.g Eutrema salsugineum HOM05D005856 ORTHO05D007264 4.7e-136 488.8 345 71.9
Sed0007662 Sechium edule HOM05D005856 ORTHO05D007264 1.0e-135 487.6 503 53.7
Eucgr.H04651 Eucalyptus grandis HOM05D005856 ORTHO05D007264 1.8e-135 486.9 488 56.4
Duzib248G0543 Durio zibethinus HOM05D005856 ORTHO05D007264 3.0e-135 486.1 495 53.5
Atru.chr11.2307 Acer truncatum HOM05D005856 ORTHO05D007264 8.9e-135 484.6 477 55.1
Nitab4.5_0000379g0010 Nicotiana tabacum HOM05D005856 ORTHO05D007264 8.9e-135 484.6 463 56.6
Potri.006G025300 Populus trichocarpa HOM05D005856 ORTHO05D007264 3.4e-134 482.6 439 56.9
Oeu036879.1 Olea europaea HOM05D005856 ORTHO05D007264 4.4e-134 482.3 443 58.0
Rhsim12G0099000 Rhododendron simsii HOM05D005856 ORTHO05D007264 4.4e-134 482.3 448 57.8
SalBow1G2377 Salvia bowleyana HOM05D005856 ORTHO05D007264 1.3e-133 480.7 440 57.5
Ciclev10031347m.g Citrus clementina HOM05D005856 ORTHO05D007264 2.8e-133 479.6 480 55.2
QL03p053723 Quercus lobata HOM05D005856 ORTHO05D007264 3.7e-133 479.2 425 60.0
Nitab4.5_0000367g0010 Nicotiana tabacum HOM05D005856 ORTHO05D007264 4.9e-133 478.8 463 55.9
CAN.G43.18 Capsicum annuum HOM05D005856 ORTHO05D007264 6.3e-133 478.4 446 56.7
Gorai.012G175300 Gossypium raimondii HOM05D005856 ORTHO05D007264 1.8e-132 476.9 451 56.3
PGR119G1218 Punica granatum HOM05D005856 ORTHO05D007264 1.8e-132 476.9 450 57.1
arahy.Tifrunner.gnm1.ann1.E9QWSH Arachis hypogaea HOM05D005856 ORTHO05D007264 7.0e-132 474.9 426 60.1
Gohir.A04G139000 Gossypium hirsutum HOM05D005856 ORTHO05D007264 7.0e-132 474.9 444 56.8
arahy.Tifrunner.gnm1.ann1.ID6EX5 Arachis hypogaea HOM05D005856 ORTHO05D007264 9.2e-132 474.6 425 60.2
Cpa.g.sc351.3 Carica papaya HOM05D005856 ORTHO05D007264 9.2e-132 474.6 480 54.0
Psat5g095080 Pisum sativum HOM05D005856 ORTHO05D007264 9.2e-132 474.6 439 56.3
CSS0003803 Camellia sinensis var. sinensis HOM05D005856 ORTHO05D007264 1.2e-131 474.2 538 50.2
Peaxi162Scf00128g01130 Petunia axillaris HOM05D005856 ORTHO05D007264 4.5e-131 472.2 454 55.1
Prupe.1G228400 Prunus persica HOM05D005856 ORTHO05D007264 5.9e-131 471.9 485 54.0
SGA_v2.0_scaffold135G34936 Striga asiatica HOM05D005856 ORTHO05D007264 2.3e-130 469.9 481 54.3
Sc04g0010050 Simmondsia chinensis HOM05D005856 ORTHO05D007264 3.8e-130 469.2 445 56.0
TPR.G28278 Trifolium pratense HOM05D005856 ORTHO05D007264 3.8e-130 469.2 482 53.9
Medtr3g085550 Medicago truncatula HOM05D005856 ORTHO05D007264 1.9e-129 466.8 485 53.4
Glyma.11G249500 Glycine max HOM05D005856 ORTHO05D007264 1.6e-128 463.8 434 56.7
Glyma.18G007700 Glycine max HOM05D005856 ORTHO05D007264 1.6e-128 463.8 479 53.2
MD13G1117100 Malus domestica HOM05D005856 ORTHO05D007264 2.1e-128 463.4 436 57.3
TAR622G1129 Trochodendron aralioides HOM05D005856 ORTHO05D007264 2.8e-128 463.0 497 52.7
Potri.016G023500 Populus trichocarpa HOM05D005856 ORTHO05D007264 3.6e-128 462.6 403 58.6
TWI36G0309 Tripterygium wilfordii HOM05D005856 ORTHO05D007264 1.0e-127 461.1 432 57.2
Aqoxy5G03410 Aquilegia oxysepala HOM05D005856 ORTHO05D007264 6.8e-127 458.4 437 56.3
Lsat_1_v5_gn_8_149340 Lactuca sativa HOM05D005856 ORTHO05D007264 6.8e-127 458.4 477 52.8
Sabra06G0018600 Salix brachista HOM05D005856 ORTHO05D007264 1.2e-126 457.6 465 52.9
Hund06082 Selenicereus undatus HOM05D005856 ORTHO05D007264 1.2e-126 457.6 493 51.5
CDE05G3252 Ceratophyllum demersum HOM05D005856 ORTHO05D007264 1.5e-126 457.2 435 54.7
VMungo1383G1560 Vigna mungo HOM05D005856 ORTHO05D007264 2.0e-126 456.8 463 54.2
DCAR_031194 Daucus carota HOM05D005856 ORTHO05D007264 2.6e-126 456.4 433 56.1
ECA233G1277 Erigeron canadensis HOM05D005856 ORTHO05D007264 2.6e-126 456.4 466 53.4
Lalb_Chr11g0075741 Lupinus albus HOM05D005856 ORTHO05D007264 9.8e-126 454.5 508 50.4
RcHm_v2.0_Chr4g0430601 Rosa chinensis HOM05D005856 ORTHO05D007264 1.3e-125 454.1 441 55.8
Phvul.001G260800 Phaseolus vulgaris HOM05D005856 ORTHO05D007264 3.7e-125 452.6 459 54.0
Nn4g22353 Nelumbo nucifera HOM05D005856 ORTHO05D007264 4.9e-125 452.2 459 55.6
CiPaw.05G111700 Carya illinoinensis HOM05D005856 ORTHO05D007264 1.1e-124 451.1 380 62.4
FAN07G1943 Fragaria x ananassa HOM05D005856 ORTHO05D007264 2.4e-124 449.9 495 51.5
Lj3g0022861 Lotus japonicus HOM05D005856 ORTHO05D007264 2.4e-124 449.9 424 56.1
FvH4_4g23940 Fragaria vesca HOM05D005856 ORTHO05D007264 4.1e-124 449.1 439 54.9
Lj3A1066G66 Lonicera japonica HOM05D005856 ORTHO05D007264 5.4e-124 448.7 397 58.7
FAN22G0691 Fragaria x ananassa HOM05D005856 ORTHO05D007264 2.0e-123 446.8 439 54.7
FAN17G0012 Fragaria x ananassa HOM05D005856 ORTHO05D007264 1.0e-122 444.5 495 51.5
PSO782G2456 Papaver somniferum HOM05D005856 ORTHO05D007264 3.0e-122 443.0 444 52.7
GSVIVG01010446001 Vitis vinifera HOM05D005856 ORTHO05D007264 6.2e-120 435.3 386 59.1
Migut.H00051 Erythranthe guttata HOM05D005856 ORTHO05D007264 4.0e-119 432.6 403 57.8
unitig_88.g27631 Utricularia gibba HOM05D005856 ORTHO05D007264 3.4e-118 429.5 493 49.9
Carub.0002s1379 Capsella rubella HOM05D005856 ORTHO05D007264 2.9e-117 426.4 459 52.7
EL10Ac6g13483 Beta vulgaris HOM05D005856 ORTHO05D007264 3.7e-117 426.0 404 55.4
Manes.12G012850 Manihot esculenta HOM05D005856 ORTHO05D007264 1.9e-116 423.7 411 56.7
HanXRQChr08g0207721 Helianthus annuus HOM05D005856 ORTHO05D007264 3.2e-116 422.9 464 50.9
AUR62005603 Chenopodium quinoa HOM05D005856 ORTHO05D007264 2.7e-115 419.9 526 47.1
ATR0561G073 Amborella trichopoda HOM05D005856 ORTHO05D007264 3.0e-114 416.4 367 58.0
AUR62024126 Chenopodium quinoa HOM05D005856 ORTHO05D007264 4.7e-112 409.1 401 54.1
SEGI_12163 Sequoiadendron giganteum HOM05D005856 ORTHO05D007264 8.1e-112 408.3 396 54.0
Os04g0381600 Oryza sativa ssp. japonica HOM05D005856 ORTHO05D007264 2.7e-107 393.3 394 53.0
Dinv14826 Davidia involucrata HOM05D005856 ORTHO05D007264 3.5e-107 392.9 359 58.5
HPP92_024239 Vanilla planifolia HOM05D005856 ORTHO05D007264 9.5e-105 384.8 408 50.2
Gohir.D04G181900 Gossypium hirsutum HOM05D005856 ORTHO05D007264 4.6e-99 365.9 445 47.9
AT1G67460 Arabidopsis thaliana HOM05D005856 ORTHO05D007264 1.3e-98 364.4 286 66.8
PSO063G1304 Papaver somniferum HOM05D005856 ORTHO05D007264 5.1e-98 362.5 443 46.7
Ca_16469_v3 Cicer arietinum L. HOM05D005856 ORTHO05D007264 5.6e-97 359.0 338 57.1
Zm00001eb420890 Zea mays HOM05D005856 ORTHO05D007264 1.1e-95 354.8 347 53.6
AagrBONN_evm.TU.Sc2ySwM_344.2476 Anthoceros agrestis HOM05D005856 ORTHO05D007264 5.1e-90 335.9 394 48.0
Pp3c14_19540 Physcomitrium patens HOM05D005856 ORTHO05D007264 2.8e-88 330.1 358 50.8
HPP92_013615 Vanilla planifolia HOM05D005856 ORTHO05D007264 2.8e-88 330.1 357 51.5
SMO236G0063 Selaginella moellendorffii HOM05D005856 ORTHO05D007264 3.6e-88 329.7 382 48.2
Mapoly0076s0016 Marchantia polymorpha HOM05D005856 ORTHO05D007264 8.1e-88 328.6 436 44.7
Cc11_g00900 Coffea canephora HOM05D005856 ORTHO05D007264 2.6e-86 323.6 290 57.6
Ah.03g136240 Amaranthus hybridus HOM05D005856 ORTHO05D007264 3.9e-82 309.7 281 58.0
Actinidia26816 Actinidia chinensis HOM05D005856 ORTHO05D007264 3.2e-76 290.0 283 56.9
CBR_g49528 Chara braunii HOM05D005856 ORTHO05D007264 3.5e-75 286.6 379 41.7
MCO13G068 Micromonas commoda HOM05D005856 ORTHO05D007264 1.4e-68 264.6 363 43.3
FAN12G0203 Fragaria x ananassa HOM05D005856 ORTHO05D007264 2.5e-65 253.8 250 52.4
AUR62005602 Chenopodium quinoa HOM05D005856 ORTHO05D007264 3.2e-60 236.9 314 44.9
PRCOL_00004669 Prasinoderma coloniale HOM05D005856 ORTHO05D007264 1.1e-55 221.9 388 36.9
Cre10.g436600 Chlamydomonas reinhardtii HOM05D005856 ORTHO05D007264 3.9e-50 203.4 439 31.2
ECA240G4225 Erigeron canadensis HOM05D005856 ORTHO05D007264 8.5e-45 185.7 291 39.5
MD07G1133300 Malus domestica HOM05D005856 ORTHO05D007264 1.2e-27 128.6 115 59.1
SMO199G0052 Selaginella moellendorffii HOM05D005856 ORTHO05D007264 7.0e-23 112.8 190 37.4
Cfa005743 Carpinus fangiana HOM05D005856 ORTHO05D007264 1.5e-20 105.1 126 45.2
SMO199G0068 Selaginella moellendorffii HOM05D005856 ORTHO05D007264 1.0e-18 99.0 202 32.2
Haze_12396 Corylus avellana HOM05D005856 ORTHO05D007264 1.5e-17 95.1 115 45.2
AL2G26330 Arabidopsis lyrata HOM05D001487 ORTHO05D001365 7.5e-17 92.8 70 61.4
SMO361G0803 Selaginella moellendorffii HOM05D005856 ORTHO05D007264 6.3e-16 89.7 102 48.0
BcaB03g15197 Brassica carinata HOM05D063035 ORTHO05D093409 1.4e-15 88.6 105 57.1
Dinv17562 Davidia involucrata HOM05D005856 ORTHO05D015634 3.1e-15 87.4 92 47.8
SMO199G0090 Selaginella moellendorffii HOM05D005856 ORTHO05D007264 9.2e-15 85.9 88 50.0
Medtr3g085580 Medicago truncatula HOM05D005856 ORTHO05D007264 1.2e-14 85.5 161 34.2
VMungo0464G1347 Vigna mungo HOM05D005856 ORTHO05D007264 1.8e-10 71.6 121 43.8
Cc02_g32220 Coffea canephora HOM05D005856 ORTHO05D007264 7.5e-09 66.2 102 41.2
Migut.O00545 Erythranthe guttata HOM05D005856 ORTHO05D007264 2.7e-06 57.8 126 31.7
SMO364G0554 Selaginella moellendorffii HOM05D005827 ORTHO05D005864 2.7e-06 57.8 277 24.5


User provided reference genes

Program Settings