Gene: Sopen05g010580

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen05g010580
  • Transcript Identifier Sopen05g010580.1
  • Gene Type Coding gene
  • Location Spenn-ch05 : 11247606-11251376 : positive

Gene Family Information

  • ID HOM05D005856
  • #Genes/#Species 134/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen05g010580.1

Descriptions

  • Description embryo defective 1688 (emb1688) | FUNCTIONS IN: GTP binding, GTPase activity | INVOLVED IN: embryo development ending in seed dormancy | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like , EngC GTPase , GTPase EngC | BEST Arabidopsis thaliana protein match is: Minichromosome maintenance (MCM2/3/5) family protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000028
ISO
PLAZA Integrative Orthologyribosomal small subunit assembly AT1G67440
GO:0009658
ISO
PLAZA Integrative Orthologychloroplast organization AT1G67440

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003924
IEA
InterProGTPase activity
GO:0005525
IEA
InterProGTP binding

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR012340 Nucleic acid-binding, OB-fold
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR004881 Ribosome biogenesis GTPase RsgA
IPR010914 RsgA GTPase domain
Mapman id Description
17.7.2.3.4 Protein biosynthesis.organelle machinery.plastidial ribosome.plastidial ribosome-associated proteins.ribosome biogenesis factor (RsgA)