Gene: Solyc05g015310.3

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc05g015310.3
  • Transcript Identifier Solyc05g015310.3.1
  • Gene Type Coding gene
  • Location SL4.0ch05 : 10396156-10399955 : positive

Gene Family Information

  • ID HOM05D005856
  • #Genes/#Species 134/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc05g015310.3.1
  • uniprot A0A3Q7GDU0
  • gene_id Solyc05g015310

Descriptions

  • Description Small ribosomal subunit biogenesis GTPase RsgA (AHRD V3.3 *** B2J3J5_NOSP7)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0042254
IEA
GOA Databaseribosome biogenesis
GO:0000028
ISO
PLAZA Integrative Orthologyribosomal small subunit assembly AT1G67440
GO:0009658
ISO
PLAZA Integrative Orthologychloroplast organization AT1G67440

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003924
IEA
GOA DatabaseGTPase activity
GO:0003924
IEA
InterProGTPase activity
GO:0005525
IEA
GOA DatabaseGTP binding
GO:0005525
IEA
InterProGTP binding
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0003723
IEA
GOA DatabaseRNA binding
GO:0000166
IEA
GOA Databasenucleotide binding
GO:0016787
IEA
GOA Databasehydrolase activity
GO:0019843
IEA
GOA DatabaserRNA binding

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR004881 Ribosome biogenesis GTPase RsgA
IPR010914 RsgA GTPase domain
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR012340 Nucleic acid-binding, OB-fold
Mapman id Description
17.7.2.3.4 Protein biosynthesis.organelle machinery.plastidial ribosome.plastidial ribosome-associated proteins.ribosome biogenesis factor (RsgA)