Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp4g20310 Schrenkiella parvula HOM05D004156 ORTHO05D005259 1.5e-173 612.8 319 100.0
Thhalv10016958m.g Eutrema salsugineum HOM05D004156 ORTHO05D005259 9.8e-162 573.5 317 93.1
A03p21000 Brassica napus HOM05D004156 ORTHO05D005259 2.7e-159 565.5 319 91.8
BraA03t11339Z Brassica rapa HOM05D004156 ORTHO05D005259 2.7e-159 565.5 319 91.8
A04p29140 Brassica napus HOM05D004156 ORTHO05D005259 1.3e-158 563.1 319 91.8
C04p66350 Brassica napus HOM05D004156 ORTHO05D005259 1.1e-157 560.1 319 91.5
BraA04t18383Z Brassica rapa HOM05D004156 ORTHO05D005259 1.1e-157 560.1 319 91.5
BcaC02g12926 Brassica carinata HOM05D004156 ORTHO05D005259 1.5e-157 559.7 319 91.2
BcaNung06518 Brassica carinata HOM05D004156 ORTHO05D005259 1.9e-157 559.3 319 90.9
BcaC01g05579 Brassica carinata HOM05D004156 ORTHO05D005259 2.1e-156 555.8 317 90.5
BolC3t14862H Brassica oleracea HOM05D004156 ORTHO05D005259 2.1e-156 555.8 317 90.5
BcaNung06338 Brassica carinata HOM05D004156 ORTHO05D005259 2.0e-154 549.3 319 90.0
BolC4t28140H Brassica oleracea HOM05D004156 ORTHO05D005259 2.0e-154 549.3 321 90.3
BcaB01g03735 Brassica carinata HOM05D004156 ORTHO05D005259 6.3e-153 544.3 337 85.5
AT2G37990 Arabidopsis thaliana HOM05D004156 ORTHO05D005259 2.3e-150 535.8 321 87.5
AL4G34970 Arabidopsis lyrata HOM05D004156 ORTHO05D005259 2.9e-150 535.4 327 86.2
Carub.0004s1996 Capsella rubella HOM05D004156 ORTHO05D005259 5.6e-149 531.2 315 87.3
CARHR132550 Cardamine hirsuta HOM05D004156 ORTHO05D005259 3.7e-145 518.5 323 83.9
Aa31LG5G23180 Aethionema arabicum HOM05D004156 ORTHO05D005259 2.4e-144 515.8 320 83.8
THA.LOC104806527 Tarenaya hassleriana HOM05D004156 ORTHO05D005259 7.1e-136 487.6 317 78.9
THA.LOC104805714 Tarenaya hassleriana HOM05D004156 ORTHO05D005259 8.3e-129 464.2 318 77.0
Gohir.D07G039500 Gossypium hirsutum HOM05D004156 ORTHO05D005259 3.6e-124 448.7 320 74.1
BraA05t19767Z Brassica rapa HOM05D004156 ORTHO05D005259 3.1e-123 445.7 319 76.8
C03p24730 Brassica napus HOM05D004156 ORTHO05D005259 6.8e-123 444.5 317 77.0
Gorai.001G041600 Gossypium raimondii HOM05D004156 ORTHO05D005259 8.9e-123 444.1 320 73.4
Gohir.A07G035500 Gossypium hirsutum HOM05D004156 ORTHO05D005259 1.5e-122 443.4 320 73.1
Gorai.009G018400 Gossypium raimondii HOM05D004156 ORTHO05D005259 4.9e-121 438.3 329 70.8
A05p08010 Brassica napus HOM05D004156 ORTHO05D005259 8.4e-121 437.6 315 76.8
Gohir.A05G017100 Gossypium hirsutum HOM05D004156 ORTHO05D005259 4.2e-120 435.3 321 72.3
COL.COLO4_05789 Corchorus olitorius HOM05D004156 ORTHO05D005259 5.4e-120 434.9 321 71.3
Thecc.09G124800 Theobroma cacao HOM05D004156 ORTHO05D005259 1.1e-117 427.2 317 71.0
Ciclev10008881m.g Citrus clementina HOM05D004156 ORTHO05D005259 3.3e-117 425.6 316 71.2
Duzib150G1332 Durio zibethinus HOM05D004156 ORTHO05D005259 1.3e-116 423.7 330 69.7
Nn8g39422 Nelumbo nucifera HOM05D004156 ORTHO05D005259 1.6e-116 423.3 306 72.2
Cpa.g.sc1199.3 Carica papaya HOM05D004156 ORTHO05D005259 2.8e-116 422.5 311 72.0
Atru.chr7.278 Acer truncatum HOM05D004156 ORTHO05D005259 8.1e-116 421.0 286 75.5
Dinv36535 Davidia involucrata HOM05D004156 ORTHO05D003047 4.4e-114 415.2 322 68.9
GSVIVG01027422001 Vitis vinifera HOM05D004156 ORTHO05D005259 5.8e-114 414.8 308 71.4
Manes.14G131500 Manihot esculenta HOM05D004156 ORTHO05D005259 2.9e-113 412.5 320 69.1
Prupe.7G241100 Prunus persica HOM05D004156 ORTHO05D005259 4.9e-113 411.8 319 69.3
GSVIVG01027072001 Vitis vinifera HOM05D004156 ORTHO05D005259 1.1e-112 410.6 317 70.0
MD15G1174800 Malus domestica HOM05D004156 ORTHO05D005259 1.4e-112 410.2 325 67.4
Actinidia35394 Actinidia chinensis HOM05D004156 ORTHO05D005259 2.4e-112 409.5 297 71.0
CsaV3_1G042300 Cucumis sativus L. HOM05D004156 ORTHO05D005259 2.4e-112 409.5 316 68.7
Hma1.2p1_0018F.1_g012530 Hydrangea macrophylla HOM05D004156 ORTHO05D005259 2.4e-112 409.5 323 69.7
TAR625G0545 Trochodendron aralioides HOM05D004156 ORTHO05D005259 3.2e-112 409.1 305 70.5
Nitab4.5_0005139g0050 Nicotiana tabacum HOM05D004156 ORTHO05D005259 5.4e-112 408.3 317 68.5
Lj7C630T1 Lonicera japonica HOM05D004156 ORTHO05D005259 7.1e-112 407.9 333 65.8
Solyc12g006550.2 Solanum lycopersicum HOM05D004156 ORTHO05D005259 7.1e-112 407.9 320 68.8
Nitab4.5_0010819g0030 Nicotiana tabacum HOM05D004156 ORTHO05D005259 1.2e-111 407.1 317 68.8
Peaxi162Scf00274g00336 Petunia axillaris HOM05D004156 ORTHO05D005259 1.2e-111 407.1 312 68.9
Sopen12g002500 Solanum pennellii HOM05D004156 ORTHO05D005259 2.1e-111 406.4 320 68.4
CAN.G594.20 Capsicum annuum HOM05D004156 ORTHO05D005259 4.6e-111 405.2 308 69.8
PGSC0003DMG400018964 Solanum tuberosum HOM05D004156 ORTHO05D005259 7.9e-111 404.4 320 67.8
MD02G1034000 Malus domestica HOM05D004156 ORTHO05D005259 1.0e-110 404.1 316 67.7
Eucgr.E02428 Eucalyptus grandis HOM05D004156 ORTHO05D005259 1.3e-110 403.7 308 68.2
TWI32G0547 Tripterygium wilfordii HOM05D004156 ORTHO05D005259 3.9e-110 402.1 294 71.4
PGR102G0554 Punica granatum HOM05D004156 ORTHO05D005259 6.6e-110 401.4 308 68.2
CSS0011304 Camellia sinensis var. sinensis HOM05D004156 ORTHO05D005259 8.7e-110 401.0 327 67.6
MELO3C015663.2 Cucumis melo HOM05D004156 ORTHO05D005259 3.3e-109 399.1 317 67.2
Cfa002719 Carpinus fangiana HOM05D004156 ORTHO05D005259 5.6e-109 398.3 311 67.2
ClCG03G013780 Citrullus lanatus HOM05D004156 ORTHO05D005259 7.3e-109 397.9 326 66.0
Sed0021765 Sechium edule HOM05D004156 ORTHO05D005259 1.3e-108 397.1 323 65.9
CANSAT11G1878 Cannabis sativa HOM05D004156 ORTHO05D005259 2.1e-108 396.4 324 65.7
HanXRQChr06g0181321 Helianthus annuus HOM05D004156 ORTHO05D005259 2.1e-108 396.4 321 65.1
FAN23G0721 Fragaria x ananassa HOM05D004156 ORTHO05D005259 4.8e-108 395.2 317 65.0
Potri.005G231000 Populus trichocarpa HOM05D004156 ORTHO05D005259 4.8e-108 395.2 300 68.7
FvH4_1g03500 Fragaria vesca HOM05D004156 ORTHO05D005259 6.2e-108 394.8 317 65.0
FAN19G1880 Fragaria x ananassa HOM05D004156 ORTHO05D005259 6.2e-108 394.8 317 65.0
FAN28G2743 Fragaria x ananassa HOM05D004156 ORTHO05D005259 6.2e-108 394.8 317 65.0
VMungo1309G1108 Vigna mungo HOM05D004156 ORTHO05D005259 2.4e-107 392.9 318 65.7
FAN26G1774 Fragaria x ananassa HOM05D004156 ORTHO05D005259 3.1e-107 392.5 317 64.7
Haze_24995 Corylus avellana HOM05D004156 ORTHO05D005259 4.0e-107 392.1 308 67.2
MBI01_g37801_MAGBIO Magnolia biondii HOM05D004156 ORTHO05D005259 5.3e-107 391.7 310 68.1
Aqoxy2G02204 Aquilegia oxysepala HOM05D004156 ORTHO05D005259 6.9e-107 391.3 295 67.5
HanXRQChr07g0187411 Helianthus annuus HOM05D004156 ORTHO05D005259 9.0e-107 391.0 323 65.0
MSTRG.12622 Avicennia marina HOM05D004156 ORTHO05D005259 1.2e-106 390.6 303 67.7
CiPaw.07G232300 Carya illinoinensis HOM05D004156 ORTHO05D005259 1.2e-106 390.6 302 68.9
Gohir.D05G018000 Gossypium hirsutum HOM05D004156 ORTHO05D005259 1.2e-106 390.6 259 76.1
Cc06_g08630 Coffea canephora HOM05D004156 ORTHO05D005259 1.5e-106 390.2 320 65.6
PSO210G0875 Papaver somniferum HOM05D004156 ORTHO05D005259 2.6e-106 389.4 309 66.3
Sc14g0000240 Simmondsia chinensis HOM05D004156 ORTHO05D005259 4.5e-106 388.7 291 67.4
Sabra05G0178400 Salix brachista HOM05D004156 ORTHO05D000382 7.6e-106 387.9 346 62.1
Glyma.13G167900 Glycine max HOM05D004156 ORTHO05D005259 2.2e-105 386.3 318 65.4
Phvul.009G258100 Phaseolus vulgaris HOM05D004156 ORTHO05D005259 2.2e-105 386.3 319 64.9
Glyma.17G115500 Glycine max HOM05D004156 ORTHO05D005259 6.4e-105 384.8 317 65.0
VMungo1215G1862 Vigna mungo HOM05D004156 ORTHO05D005259 1.1e-104 384.0 314 65.0
DCAR_014878 Daucus carota HOM05D004156 ORTHO05D005259 1.4e-104 383.6 291 68.4
Ah.14g087130 Amaranthus hybridus HOM05D004156 ORTHO05D005259 1.9e-104 383.3 292 66.1
Aqoxy6G01405 Aquilegia oxysepala HOM05D004156 ORTHO05D005259 1.9e-104 383.3 289 67.5
Lsat_1_v5_gn_9_120581 Lactuca sativa HOM05D004156 ORTHO05D005259 2.4e-104 382.9 319 63.9
PSO832G0272 Papaver somniferum HOM05D004156 ORTHO05D005259 2.4e-104 382.9 309 65.7
Phvul.003G163900 Phaseolus vulgaris HOM05D004156 ORTHO05D005259 5.4e-104 381.7 307 65.8
Psat2g006920 Pisum sativum HOM05D004156 ORTHO05D005259 7.1e-104 381.3 316 63.6
SGA_v2.0_scaffold35G14133 Striga asiatica HOM05D004156 ORTHO05D005259 1.2e-103 380.6 320 65.3
AUR62013371 Chenopodium quinoa HOM05D004156 ORTHO05D005259 2.1e-103 379.8 286 67.5
RcHm_v2.0_Chr2g0088711 Rosa chinensis HOM05D004156 ORTHO05D005259 1.3e-102 377.1 309 63.8
TWI34G0257 Tripterygium wilfordii HOM05D004156 ORTHO05D005259 2.3e-102 376.3 355 60.6
EL10Ac8g18639 Beta vulgaris HOM05D004156 ORTHO05D005259 8.7e-102 374.4 320 61.9
ECA247G0053 Erigeron canadensis HOM05D004156 ORTHO05D005259 8.7e-102 374.4 314 63.4
Lj4g0019515 Lotus japonicus HOM05D004156 ORTHO05D005259 8.7e-102 374.4 315 61.9
QL02p088083 Quercus lobata HOM05D004156 ORTHO05D005259 1.5e-101 373.6 292 65.8
Rhsim03G0247600 Rhododendron simsii HOM05D004156 ORTHO05D005259 2.5e-101 372.9 395 55.9
DCAR_017823 Daucus carota HOM05D004156 ORTHO05D005259 5.6e-101 371.7 345 59.4
AUR62011120 Chenopodium quinoa HOM05D004156 ORTHO05D005259 1.3e-100 370.5 296 64.9
vmacro22115 Vaccinium macrocarpon HOM05D004156 ORTHO05D005259 1.3e-100 370.5 321 64.8
BcaB02g09228 Brassica carinata HOM05D004156 ORTHO05D005259 1.6e-100 370.2 223 91.0
BolC4t22574H Brassica oleracea HOM05D004156 ORTHO05D005259 2.1e-100 369.8 267 75.3
arahy.Tifrunner.gnm1.ann1.KP5LKI Arachis hypogaea HOM05D004156 ORTHO05D005259 6.2e-100 368.2 309 63.4
Os04g0685100 Oryza sativa ssp. japonica HOM05D004156 ORTHO05D005259 8.1e-100 367.9 316 63.0
HPP92_015694 Vanilla planifolia HOM05D004156 ORTHO05D005259 8.1e-100 367.9 286 67.5
ATR0730G095 Amborella trichopoda HOM05D004156 ORTHO05D005259 3.1e-99 365.9 315 63.5
ClCG06G011000 Citrullus lanatus HOM05D004156 ORTHO05D005259 3.1e-99 365.9 324 61.1
TPR.G25243 Trifolium pratense HOM05D004156 ORTHO05D005259 3.1e-99 365.9 315 62.5
unitig_21.g20656 Utricularia gibba HOM05D004156 ORTHO05D005259 4.0e-99 365.5 317 62.8
arahy.Tifrunner.gnm1.ann1.FDU8BE Arachis hypogaea HOM05D004156 ORTHO05D005259 9.0e-99 364.4 303 63.7
Lalb_Chr12g0197861 Lupinus albus HOM05D004156 ORTHO05D005259 9.0e-99 364.4 308 63.3
Migut.L01695 Erythranthe guttata HOM05D004156 ORTHO05D005259 5.8e-98 361.7 285 65.3
Sed0019954 Sechium edule HOM05D004156 ORTHO05D005259 7.6e-98 361.3 311 63.0
Oeu055874.1 Olea europaea HOM05D004156 ORTHO05D005259 4.9e-97 358.6 312 64.1
Medtr2g008870 Medicago truncatula HOM05D004156 ORTHO05D005259 1.6e-95 353.6 319 59.9
BcaC02g11942 Brassica carinata HOM05D004156 ORTHO05D005259 2.7e-95 352.8 258 77.1
SalBow5G0058 Salvia bowleyana HOM05D004156 ORTHO05D005259 2.7e-95 352.8 394 52.5
SGA_v2.0_scaffold224G42948 Striga asiatica HOM05D004156 ORTHO05D005259 4.6e-95 352.1 340 60.6
Zm00001eb122260 Zea mays HOM05D004156 ORTHO05D005259 1.5e-93 347.1 309 61.8
Lalb_Chr07g0178901 Lupinus albus HOM05D004156 ORTHO05D005259 2.8e-92 342.8 304 63.8
CDE04G1546 Ceratophyllum demersum HOM05D004156 ORTHO05D005259 1.4e-91 340.5 294 60.9
Gohir.D08G025232 Gossypium hirsutum HOM05D004156 ORTHO05D005259 1.4e-91 340.5 371 56.1
C04p09670 Brassica napus HOM05D004156 ORTHO05D005259 1.4e-88 330.5 238 77.7
CiPaw.15G031800 Carya illinoinensis HOM05D004156 ORTHO05D005259 1.2e-87 327.4 315 58.7
Hund09135 Selenicereus undatus HOM05D004156 ORTHO05D005259 1.2e-87 327.4 345 55.1
Atru.chr7.1220 Acer truncatum HOM05D004156 ORTHO05D005259 2.7e-87 326.2 319 57.1
SEGI_31652 Sequoiadendron giganteum HOM05D004156 ORTHO05D005259 1.0e-86 324.3 315 56.5
Mapoly0036s0028 Marchantia polymorpha HOM05D004156 ORTHO05D005259 1.3e-84 317.4 296 57.1
Actinidia26780 Actinidia chinensis HOM05D004156 ORTHO05D005259 5.3e-83 312.0 330 57.6
Ca_00137_v3 Cicer arietinum L. HOM05D004156 ORTHO05D000741 3.4e-82 309.3 285 59.3
BcaC02g11940 Brassica carinata HOM05D004156 ORTHO05D005259 3.6e-79 299.3 177 91.0
Zm00001eb337040 Zea mays HOM05D004156 ORTHO05D005259 1.4e-78 297.4 308 55.2
C03p24670 Brassica napus HOM05D004156 ORTHO05D005259 3.9e-78 295.8 158 92.4
AagrBONN_evm.TU.Sc2ySwM_368.2845 Anthoceros agrestis HOM05D004156 ORTHO05D005259 8.2e-76 288.1 300 54.0
Sc18g0000640 Simmondsia chinensis HOM05D004156 ORTHO05D005259 8.2e-76 288.1 291 54.0
SMO351G0347 Selaginella moellendorffii HOM05D004156 ORTHO05D005259 2.6e-69 266.5 252 56.0
CBR_g18768 Chara braunii HOM05D004156 ORTHO05D005259 1.7e-68 263.8 288 50.3
Pp3c3_32550 Physcomitrium patens HOM05D004156 ORTHO05D005259 1.4e-67 260.8 318 51.9
TAR626G0974 Trochodendron aralioides HOM05D004156 ORTHO05D005259 5.9e-66 255.4 176 74.4
HanXRQChr06g0181331 Helianthus annuus HOM05D004156 ORTHO05D005259 7.2e-56 221.9 166 69.3
BcaC09g49789 Brassica carinata HOM05D004156 ORTHO05D005259 4.0e-54 216.1 139 85.6
Oeu045226.1 Olea europaea HOM05D004156 ORTHO05D005259 4.8e-52 209.1 317 44.2
Gohir.A08G014600 Gossypium hirsutum HOM05D004156 ORTHO05D005259 3.8e-49 199.5 143 76.9
Cre01.g020950 Chlamydomonas reinhardtii HOM05D004156 ORTHO05D005259 1.5e-45 187.6 303 41.3
TAR383G1033 Trochodendron aralioides HOM05D004156 ORTHO05D005259 5.6e-40 169.1 169 62.1
Nitab4.5_0002556g0050 Nicotiana tabacum HOM05D004156 ORTHO05D005259 1.0e-38 164.9 187 55.6
BcaNung06017 Brassica carinata HOM05D004156 ORTHO05D005259 3.7e-36 156.4 83 89.2
Os06g0142050 Oryza sativa ssp. japonica HOM05D004156 ORTHO05D005259 6.6e-33 145.6 163 57.7
PRCOL_00002162 Prasinoderma coloniale HOM05D004156 ORTHO05D005259 1.5e-29 134.4 316 35.1
C01p32910 Brassica napus HOM05D004156 ORTHO05D005259 1.4e-27 127.9 99 71.7
MCO03G226 Micromonas commoda HOM05D004156 ORTHO05D005259 7.8e-26 122.1 306 34.3
Actinidia37158 Actinidia chinensis HOM05D004156 ORTHO05D005259 8.6e-25 118.6 115 64.3
Nn8g39426 Nelumbo nucifera HOM05D004156 ORTHO05D005259 5.8e-21 105.9 71 64.8
AagrBONN_evm.TU.Sc2ySwM_228.5043 Anthoceros agrestis HOM05D004156 ORTHO05D005259 1.2e-18 98.2 90 54.4
AagrBONN_evm.TU.Sc2ySwM_228.5042 Anthoceros agrestis HOM05D004156 ORTHO05D005259 3.6e-15 86.7 89 53.9
Rhsim11G0147700 Rhododendron simsii HOM05D004156 ORTHO05D338749 2.1e-10 70.9 61 60.7
Psat0s2088g0120 Pisum sativum HOM05D001944 ORTHO05D002405 1.9e-08 64.3 38 89.5
Zm00001eb060690 Zea mays HOM05D004156 ORTHO05D005259 2.5e-08 63.9 56 53.6
Zm00001eb433790 Zea mays HOM05D003078 ORTHO05D446193 7.3e-08 62.4 56 51.8
TAR636G0452 Trochodendron aralioides HOM05D000809 ORTHO05D007735 1.2e-07 61.6 43 69.8


User provided reference genes

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