Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp3g21380 Schrenkiella parvula HOM05D004593 ORTHO05D017396 2.2e-247 858.6 458 100.0
AL1G11040 Arabidopsis lyrata HOM05D004593 ORTHO05D017396 4.6e-104 382.5 441 50.1
BolC5t28848H Brassica oleracea HOM05D004593 ORTHO05D017396 2.6e-99 366.7 457 48.6
C05p00590 Brassica napus HOM05D004593 ORTHO05D017396 7.1e-97 358.6 457 47.7
Thhalv10005276m.g Eutrema salsugineum HOM05D004593 ORTHO05D017396 9.9e-91 338.2 441 46.5
AT1G01410 Arabidopsis thaliana HOM05D004593 ORTHO05D017396 1.7e-82 310.8 368 47.8
CARHR278440 Cardamine hirsuta HOM05D004593 ORTHO05D017396 8.2e-77 292.0 442 42.5
AT5G64490 Arabidopsis thaliana HOM05D004593 ORTHO05D003703 1.5e-33 148.3 187 48.1
BcaB03g13579 Brassica carinata HOM05D004593 ORTHO05D003703 1.7e-29 134.8 177 47.5
A03p11320 Brassica napus HOM05D004593 ORTHO05D003703 1.5e-25 121.7 275 30.9
BraA03t10445Z Brassica rapa HOM05D004593 ORTHO05D003703 1.5e-25 121.7 275 30.9
BraA10t43809Z Brassica rapa HOM05D004593 ORTHO05D003703 2.5e-25 120.9 276 32.2
AL71U10060 Arabidopsis lyrata HOM05D004593 ORTHO05D003703 3.3e-25 120.6 275 32.0
AL8G36700 Arabidopsis lyrata HOM05D004593 ORTHO05D003703 3.3e-25 120.6 275 32.0
BraA10t43816Z Brassica rapa HOM05D004593 ORTHO05D003703 4.2e-25 120.2 298 30.2
A10p17250 Brassica napus HOM05D004593 ORTHO05D003703 7.2e-25 119.4 275 30.9
C03p13050 Brassica napus HOM05D004593 ORTHO05D003703 9.5e-25 119.0 274 30.3
AL8G36790 Arabidopsis lyrata HOM05D004593 ORTHO05D003703 1.2e-24 118.6 271 32.1
Thhalv10015510m.g Eutrema salsugineum HOM05D004593 ORTHO05D003703 1.2e-24 118.6 274 31.4
A10p17310 Brassica napus HOM05D004593 ORTHO05D003703 1.6e-24 118.2 300 30.3
BolC9t58127H Brassica oleracea HOM05D004593 ORTHO05D003703 1.6e-24 118.2 276 32.6
Thhalv10015422m.g Eutrema salsugineum HOM05D004593 ORTHO05D003703 1.6e-24 118.2 298 30.5
Thhalv10016021m.g Eutrema salsugineum HOM05D004593 ORTHO05D003703 1.6e-24 118.2 298 30.5
Thhalv10011949m.g Eutrema salsugineum HOM05D004593 ORTHO05D003703 2.1e-24 117.9 274 30.7
CARHR036840 Cardamine hirsuta HOM05D004593 ORTHO05D003703 3.6e-24 117.1 271 32.5
BcaB08g36222 Brassica carinata HOM05D004593 ORTHO05D003703 6.1e-24 116.3 277 31.4
BcaC04g19662 Brassica carinata HOM05D004593 ORTHO05D003703 8.0e-24 115.9 275 30.5
C09p52660 Brassica napus HOM05D004593 ORTHO05D003703 8.0e-24 115.9 275 30.5
BolC9t58133H Brassica oleracea HOM05D004593 ORTHO05D003703 8.0e-24 115.9 275 30.5
AT5G60110 Arabidopsis thaliana HOM05D004593 ORTHO05D003703 1.0e-23 115.5 273 33.3
Thhalv10015334m.g Eutrema salsugineum HOM05D004593 ORTHO05D003703 1.0e-23 115.5 274 33.6
BcaNung07341 Brassica carinata HOM05D004593 ORTHO05D003703 1.4e-23 115.2 276 32.2
C09p52610 Brassica napus HOM05D004593 ORTHO05D003703 1.4e-23 115.2 276 32.2
AT5G60180 Arabidopsis thaliana HOM05D004593 ORTHO05D003703 2.3e-23 114.4 273 31.5
Thhalv10015341m.g Eutrema salsugineum HOM05D004593 ORTHO05D003703 6.8e-23 112.8 274 32.8
A08p10760 Brassica napus HOM05D004593 ORTHO05D003703 1.5e-22 111.7 276 30.1
BraA08t33073Z Brassica rapa HOM05D004593 ORTHO05D003703 1.5e-22 111.7 276 30.1
Sp6g20950 Schrenkiella parvula HOM05D004593 ORTHO05D003703 2.0e-22 111.3 277 31.4
CARHR273750 Cardamine hirsuta HOM05D004593 ORTHO05D003703 2.6e-22 110.9 273 32.2
AL8G41860 Arabidopsis lyrata HOM05D004593 ORTHO05D003703 3.4e-22 110.5 269 30.9
CARHR183820 Cardamine hirsuta HOM05D004593 ORTHO05D003703 2.8e-21 107.5 262 32.4
Carub.0008s2091 Capsella rubella HOM05D004593 ORTHO05D003703 3.7e-21 107.1 276 30.1
Sp1g28540 Schrenkiella parvula HOM05D004593 ORTHO05D003703 4.9e-21 106.7 274 30.3
C09p52250 Brassica napus HOM05D004593 ORTHO05D003703 6.3e-21 106.3 273 29.7
AT1G21620 Arabidopsis thaliana HOM05D004593 ORTHO05D003703 1.1e-20 105.5 242 31.8
Carub.0008s2083 Capsella rubella HOM05D004593 ORTHO05D003703 1.4e-20 105.1 278 29.5
CARHR273860 Cardamine hirsuta HOM05D004593 ORTHO05D003703 1.8e-20 104.8 297 30.3
CARHR157270 Cardamine hirsuta HOM05D004593 ORTHO05D003703 3.1e-20 104.0 274 29.6
AL8G35710 Arabidopsis lyrata HOM05D004593 ORTHO05D003703 4.1e-20 103.6 276 29.0
A10p17000 Brassica napus HOM05D004593 ORTHO05D003703 5.4e-20 103.2 274 29.9
Carub.0008s1994 Capsella rubella HOM05D004593 ORTHO05D003703 1.2e-19 102.1 272 27.9
BcaC04g19627 Brassica carinata HOM05D004593 ORTHO05D003703 1.6e-19 101.7 273 29.3
Carub.0008s2528 Capsella rubella HOM05D004593 ORTHO05D003703 4.5e-19 100.1 269 31.6
BcaC04g19796 Brassica carinata HOM05D004593 ORTHO05D003703 2.3e-18 97.8 277 28.9
BcaB08g36269 Brassica carinata HOM05D004593 ORTHO05D003703 3.8e-18 97.1 279 29.0
C09p51570 Brassica napus HOM05D004593 ORTHO05D003703 3.8e-18 97.1 280 28.6
BolC9t58016H Brassica oleracea HOM05D004593 ORTHO05D003703 3.8e-18 97.1 280 28.6
Sp6g21760 Schrenkiella parvula HOM05D004593 ORTHO05D003703 6.6e-18 96.3 243 30.9
BraA03t10472Z Brassica rapa HOM05D004593 ORTHO05D003703 1.5e-17 95.1 275 28.4
A03p11590 Brassica napus HOM05D004593 ORTHO05D003703 2.5e-17 94.4 274 28.1
A10p16490 Brassica napus HOM05D004593 ORTHO05D003703 4.3e-17 93.6 280 28.2
A10p16850 Brassica napus HOM05D004593 ORTHO05D003703 4.3e-17 93.6 279 29.4
BraA10t43732Z Brassica rapa HOM05D004593 ORTHO05D003703 4.3e-17 93.6 280 28.2
BraA10t43763Z Brassica rapa HOM05D004593 ORTHO05D003703 1.2e-16 92.0 314 28.0
C03p13480 Brassica napus HOM05D004593 ORTHO05D003703 1.0e-15 89.0 261 28.4
BraA10t43760Z Brassica rapa HOM05D004593 ORTHO05D003703 1.0e-15 89.0 279 27.2
Sp6g21810 Schrenkiella parvula HOM05D004593 ORTHO05D003703 1.0e-15 89.0 170 33.5
A10p16810 Brassica napus HOM05D004593 ORTHO05D003703 1.8e-15 88.2 277 28.5
BolC3t13805H Brassica oleracea HOM05D004593 ORTHO05D003703 1.8e-15 88.2 261 28.4
BcaB08g36243 Brassica carinata HOM05D004593 ORTHO05D003703 2.3e-15 87.8 276 29.3
BraA10t43762Z Brassica rapa HOM05D004593 ORTHO05D003703 2.3e-15 87.8 278 29.5
A02p07020 Brassica napus HOM05D004593 ORTHO05D003703 3.0e-15 87.4 273 29.7
BolC3t13767H Brassica oleracea HOM05D004593 ORTHO05D003703 3.0e-15 87.4 211 29.4
BolC3t13768H Brassica oleracea HOM05D004593 ORTHO05D003703 4.0e-15 87.0 141 35.5
BcaC04g19751 Brassica carinata HOM05D004593 ORTHO05D003703 5.2e-15 86.7 278 29.5
C09p51990 Brassica napus HOM05D004593 ORTHO05D003703 5.2e-15 86.7 275 27.6
BolC9t58061H Brassica oleracea HOM05D004593 ORTHO05D003703 5.2e-15 86.7 275 27.6
BolC9t58062H Brassica oleracea HOM05D004593 ORTHO05D003703 5.2e-15 86.7 278 29.5
CARHR285940 Cardamine hirsuta HOM05D004593 ORTHO05D003703 8.9e-15 85.9 241 28.6
Aa31LG1G11610 Aethionema arabicum HOM05D004593 ORTHO05D003703 2.6e-14 84.3 271 26.9
BcaB01g04563 Brassica carinata HOM05D004593 ORTHO05D003703 3.4e-14 84.0 274 27.4
BcaB01g06359 Brassica carinata HOM05D004593 ORTHO05D003703 4.4e-14 83.6 139 35.3
BcaC03g13997 Brassica carinata HOM05D004593 ORTHO05D003703 4.4e-14 83.6 273 27.1
C02p12360 Brassica napus HOM05D004593 ORTHO05D003703 4.4e-14 83.6 273 27.1
BolC2t07336H Brassica oleracea HOM05D004593 ORTHO05D003703 4.4e-14 83.6 273 27.1
AT5G59280 Arabidopsis thaliana HOM05D004593 ORTHO05D003703 5.8e-14 83.2 289 26.0
BcaB05g22526 Brassica carinata HOM05D004593 ORTHO05D003703 7.5e-14 82.8 272 26.5
C09p52000 Brassica napus HOM05D004593 ORTHO05D003703 7.5e-14 82.8 257 29.6
BraA02t05782Z Brassica rapa HOM05D004593 ORTHO05D003703 7.5e-14 82.8 273 26.7
Thhalv10014036m.g Eutrema salsugineum HOM05D004593 ORTHO05D003703 7.5e-14 82.8 275 26.9
THA.LOC104818524 Tarenaya hassleriana HOM05D004593 ORTHO05D003703 2.9e-13 80.9 269 28.6
A10p16860 Brassica napus HOM05D004593 ORTHO05D003703 6.4e-13 79.7 275 28.7
Aa31LG2G18740 Aethionema arabicum HOM05D004593 ORTHO05D003703 8.3e-13 79.3 147 32.0
C09p52010 Brassica napus HOM05D004593 ORTHO05D003703 1.1e-12 79.0 277 29.6
BolC9t58063H Brassica oleracea HOM05D004593 ORTHO05D003703 1.1e-12 79.0 277 29.6
THA.LOC104818525 Tarenaya hassleriana HOM05D004593 ORTHO05D003703 1.1e-12 79.0 271 26.9
THA.LOC104818526 Tarenaya hassleriana HOM05D004593 ORTHO05D003703 1.1e-12 79.0 271 26.9
THA.LOC104818528 Tarenaya hassleriana HOM05D004593 ORTHO05D003703 1.1e-12 79.0 271 26.9
BraA03t10471Z Brassica rapa HOM05D004593 ORTHO05D003703 1.9e-12 78.2 265 26.0
BcaC04g19750 Brassica carinata HOM05D004593 ORTHO05D003703 2.4e-12 77.8 277 29.2
BraA10t43765Z Brassica rapa HOM05D004593 ORTHO05D003703 7.0e-12 76.3 275 28.4
A03p11580 Brassica napus HOM05D004593 ORTHO05D003703 9.2e-12 75.9 275 25.8
Sp6g21310 Schrenkiella parvula HOM05D004593 ORTHO05D003703 9.2e-12 75.9 275 26.9
C03p13460 Brassica napus HOM05D004593 ORTHO05D003703 1.2e-11 75.5 170 30.0
BolC3t13803H Brassica oleracea HOM05D004593 ORTHO05D003703 1.2e-11 75.5 170 30.0
BcaB08g36241 Brassica carinata HOM05D004593 ORTHO05D003703 1.6e-11 75.1 263 28.9
BraA03t10446Z Brassica rapa HOM05D004593 ORTHO05D003703 2.7e-11 74.3 178 31.5
THA.LOC104818529 Tarenaya hassleriana HOM05D004593 ORTHO05D003703 2.7e-11 74.3 269 29.0
BcaB01g04566 Brassica carinata HOM05D004593 ORTHO05D003703 1.7e-10 71.6 175 29.7
A09p33820 Brassica napus HOM05D004593 ORTHO05D003703 1.7e-10 71.6 144 36.1
A10p16830 Brassica napus HOM05D004593 ORTHO05D003703 8.6e-10 69.3 165 32.7
BcaC01g06510 Brassica carinata HOM05D004593 ORTHO05D003703 1.1e-09 68.9 300 26.0
C02p12180 Brassica napus HOM05D004593 ORTHO05D003703 1.1e-09 68.9 103 40.8
C03p13470 Brassica napus HOM05D004593 ORTHO05D003703 1.1e-09 68.9 181 29.8
BcaC01g06509 Brassica carinata HOM05D004593 ORTHO05D003703 1.5e-09 68.6 292 25.7
A02p41070 Brassica napus HOM05D004593 ORTHO05D003703 1.9e-09 68.2 131 37.4
A03p54980 Brassica napus HOM05D004593 ORTHO05D003703 1.9e-09 68.2 131 37.4
Aa31LG1G12760 Aethionema arabicum HOM05D004593 ORTHO05D003703 2.5e-09 67.8 277 27.8
BcaB08g36242 Brassica carinata HOM05D004593 ORTHO05D003703 2.5e-09 67.8 125 33.6
BraA03t10473Z Brassica rapa HOM05D004593 ORTHO05D003703 7.3e-09 66.2 281 24.9
A03p11600 Brassica napus HOM05D004593 ORTHO05D003703 4.7e-08 63.5 281 24.6
BcaB05g22575 Brassica carinata HOM05D004593 ORTHO05D003703 6.2e-08 63.2 102 35.3
BolC3t13808H Brassica oleracea HOM05D004593 ORTHO05D003703 1.1e-07 62.4 279 24.4
BraA10t43761Z Brassica rapa HOM05D004593 ORTHO05D003703 1.1e-07 62.4 130 36.2
BcaB08g36239 Brassica carinata HOM05D004593 ORTHO05D003703 3.1e-07 60.8 242 28.1
C03p13530 Brassica napus HOM05D004593 ORTHO05D003703 3.1e-07 60.8 282 23.4
CARHR118680 Cardamine hirsuta HOM05D004593 ORTHO05D003703 3.1e-07 60.8 95 38.9
BolC3t13804H Brassica oleracea HOM05D004593 ORTHO05D003703 4.0e-07 60.5 181 28.7
BcaB08g36237 Brassica carinata HOM05D004593 ORTHO05D003703 5.2e-07 60.1 281 24.2
Manes.14G015800 Manihot esculenta HOM05D000867 ORTHO05D003703 6.8e-07 59.7 143 30.8
A10p16840 Brassica napus HOM05D004593 ORTHO05D003703 1.2e-06 58.9 201 26.4
A10p00560 Brassica napus HOM05D047897 ORTHO05D017396 4.4e-06 57.0 74 50.0
BraA10t42335Z Brassica rapa HOM05D047897 ORTHO05D017396 4.4e-06 57.0 74 50.0
BcaC01g06512 Brassica carinata HOM05D004593 ORTHO05D003703 7.5e-06 56.2 171 28.7


User provided reference genes

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