Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp2g24250 Schrenkiella parvula HOM05D006809 ORTHO05D008609 1.6e-223 779.2 430 100.0
CARHR274620 Cardamine hirsuta HOM05D006809 ORTHO05D008609 1.4e-203 713.0 430 91.6
AT5G60940 Arabidopsis thaliana HOM05D006809 ORTHO05D008609 1.5e-202 709.5 430 89.8
BcaC06g33207 Brassica carinata HOM05D006809 ORTHO05D008609 6.5e-201 704.1 440 90.5
Thhalv10004278m.g Eutrema salsugineum HOM05D006809 ORTHO05D008609 2.5e-200 702.2 425 91.8
Carub.0008s2163 Capsella rubella HOM05D006809 ORTHO05D008609 1.3e-198 696.4 430 89.1
BolC7t44995H Brassica oleracea HOM05D006809 ORTHO05D008609 3.0e-198 695.3 434 90.6
BcaNung06908 Brassica carinata HOM05D006809 ORTHO05D008609 5.1e-198 694.5 431 90.5
C07p44720 Brassica napus HOM05D006809 ORTHO05D008609 5.1e-198 694.5 434 90.3
AL8G37560 Arabidopsis lyrata HOM05D006809 ORTHO05D008609 4.1e-195 684.9 430 88.1
A03p46650 Brassica napus HOM05D006809 ORTHO05D008609 1.2e-194 683.3 431 81.9
BraA03t13789Z Brassica rapa HOM05D006809 ORTHO05D008609 1.2e-194 683.3 431 81.9
Aa31LG11G2360 Aethionema arabicum HOM05D006809 ORTHO05D008609 2.2e-188 662.5 434 77.0
Gohir.A07G067300 Gossypium hirsutum HOM05D006809 ORTHO05D008609 2.0e-157 559.7 438 72.6
COL.COLO4_24315 Corchorus olitorius HOM05D006809 ORTHO05D008609 3.7e-156 555.4 438 72.8
Gohir.D07G071900 Gossypium hirsutum HOM05D006809 ORTHO05D008609 1.8e-155 553.1 438 71.9
Gorai.001G076000 Gossypium raimondii HOM05D006809 ORTHO05D008609 1.8e-155 553.1 438 71.9
Duzib205G0618 Durio zibethinus HOM05D006809 ORTHO05D008609 2.4e-155 552.7 435 72.6
Thecc.03G104800 Theobroma cacao HOM05D006809 ORTHO05D008609 3.1e-155 552.4 435 72.2
Manes.14G087700 Manihot esculenta HOM05D006809 ORTHO05D008609 1.6e-154 550.1 435 72.0
Cfa019358 Carpinus fangiana HOM05D006809 ORTHO05D008609 1.0e-153 547.4 437 71.4
CiPaw.12G009200 Carya illinoinensis HOM05D006809 ORTHO05D008609 1.0e-153 547.4 437 71.9
Nn4g23476 Nelumbo nucifera HOM05D006809 ORTHO05D008609 1.0e-153 547.4 432 71.1
QL10p020149 Quercus lobata HOM05D006809 ORTHO05D008609 1.9e-152 543.1 435 70.6
CANSAT11G1370 Cannabis sativa HOM05D006809 ORTHO05D008609 7.2e-152 541.2 437 69.8
Hma1.2p1_0060F.1_g032880 Hydrangea macrophylla HOM05D006809 ORTHO05D008609 7.2e-152 541.2 434 70.3
TWI81G0697 Tripterygium wilfordii HOM05D006809 ORTHO05D008609 2.1e-151 539.7 434 71.2
Eucgr.K02539 Eucalyptus grandis HOM05D006809 ORTHO05D008609 2.0e-149 533.1 438 69.9
CsaV3_1G006160 Cucumis sativus L. HOM05D006809 ORTHO05D008609 4.4e-149 531.9 436 68.1
Actinidia04809 Actinidia chinensis HOM05D006809 ORTHO05D008609 7.5e-149 531.2 435 68.3
Cpa.g.sc94.80 Carica papaya HOM05D006809 ORTHO05D008609 1.7e-148 530.0 426 71.4
PSO017G0895 Papaver somniferum HOM05D006809 ORTHO05D008609 6.3e-148 528.1 437 68.6
HanXRQChr05g0154271 Helianthus annuus HOM05D006809 ORTHO05D008609 1.1e-147 527.3 436 68.6
TAR629G2676 Trochodendron aralioides HOM05D006809 ORTHO05D008609 1.1e-147 527.3 431 69.4
FAN08G0740 Fragaria x ananassa HOM05D006809 ORTHO05D008609 1.4e-147 526.9 455 59.3
Sopen12g018840 Solanum pennellii HOM05D006809 ORTHO05D008609 1.4e-147 526.9 431 68.4
PGR044G2265 Punica granatum HOM05D006809 ORTHO05D008609 1.8e-147 526.6 434 70.5
MELO3C002045.2 Cucumis melo HOM05D006809 ORTHO05D008609 4.1e-147 525.4 436 67.7
Ciclev10023968m.g Citrus clementina HOM05D006809 ORTHO05D008609 5.4e-147 525.0 462 67.3
DCAR_010163 Daucus carota HOM05D006809 ORTHO05D008609 5.4e-147 525.0 437 68.0
PSO478G2035 Papaver somniferum HOM05D006809 ORTHO05D008609 5.4e-147 525.0 437 68.4
RcHm_v2.0_Chr7g0183371 Rosa chinensis HOM05D006809 ORTHO05D008609 9.2e-147 524.2 434 69.6
Sc12g0007330 Simmondsia chinensis HOM05D006809 ORTHO05D008609 9.2e-147 524.2 436 68.1
MSTRG.11330 Avicennia marina HOM05D006809 ORTHO05D008609 1.2e-146 523.9 434 69.4
CSS0043969 Camellia sinensis var. sinensis HOM05D006809 ORTHO05D008609 1.6e-146 523.5 445 67.9
MD06G1203600 Malus domestica HOM05D006809 ORTHO05D008609 3.5e-146 522.3 434 65.4
Dinv22761 Davidia involucrata HOM05D006809 ORTHO05D008609 4.5e-146 521.9 428 69.4
FAN13G1268 Fragaria x ananassa HOM05D006809 ORTHO05D008609 1.3e-145 520.4 434 68.7
Cc11_g04700 Coffea canephora HOM05D006809 ORTHO05D008609 3.9e-145 518.8 451 57.9
FAN18G0725 Fragaria x ananassa HOM05D006809 ORTHO05D008609 1.2e-143 513.8 433 68.8
Medtr2g060520 Medicago truncatula HOM05D006809 ORTHO05D008609 1.4e-142 510.4 435 67.4
GSVIVG01008127001 Vitis vinifera HOM05D006809 ORTHO05D008609 6.8e-142 508.1 434 66.8
Haze_07749 Corylus avellana HOM05D006809 ORTHO05D008609 4.4e-141 505.4 439 67.9
Glyma.06G205000 Glycine max HOM05D006809 ORTHO05D008609 1.3e-140 503.8 432 67.4
Lj5A134T75 Lonicera japonica HOM05D006809 ORTHO05D008609 4.9e-140 501.9 434 66.1
Ca_02916_v3 Cicer arietinum L. HOM05D006809 ORTHO05D008609 1.2e-138 497.3 436 67.0
Aqoxy3G03648 Aquilegia oxysepala HOM05D006809 ORTHO05D008609 1.9e-136 490.0 432 65.7
Lsat_1_v5_gn_5_23620 Lactuca sativa HOM05D006809 ORTHO05D008609 2.5e-136 489.6 437 62.5
CSS0020904 Camellia sinensis var. sinensis HOM05D006809 ORTHO05D008609 7.3e-136 488.0 406 69.0
ClCG04G011640 Citrullus lanatus HOM05D006809 ORTHO05D000432 1.6e-135 486.9 451 63.4
Nitab4.5_0001723g0010 Nicotiana tabacum HOM05D006809 ORTHO05D008609 1.6e-135 486.9 464 62.9
Oeu014424.1 Olea europaea HOM05D006809 ORTHO05D008609 8.0e-135 484.6 407 69.3
ECA246G1387 Erigeron canadensis HOM05D006809 ORTHO05D008609 1.1e-134 484.2 437 56.3
Rhsim08G0143500 Rhododendron simsii HOM05D006809 ORTHO05D008609 2.0e-133 479.9 598 45.5
Lalb_Chr07g0189231 Lupinus albus HOM05D006809 ORTHO05D008609 2.6e-133 479.6 436 64.4
Sed0027469 Sechium edule HOM05D006809 ORTHO05D008609 7.5e-133 478.0 408 66.7
SalBow5G3990 Salvia bowleyana HOM05D006809 ORTHO05D008609 1.7e-132 476.9 437 64.5
vmacro16181 Vaccinium macrocarpon HOM05D006809 ORTHO05D008609 4.9e-132 475.3 557 48.1
Lj1g0027663 Lotus japonicus HOM05D006809 ORTHO05D008609 1.9e-131 473.4 437 64.5
arahy.Tifrunner.gnm1.ann1.23QZVI Arachis hypogaea HOM05D006809 ORTHO05D008609 4.1e-131 472.2 454 62.8
EL10Ac5g11165 Beta vulgaris HOM05D006809 ORTHO05D008609 2.3e-129 466.5 468 53.6
Os03g0754900 Oryza sativa ssp. japonica HOM05D006809 ORTHO05D008609 2.3e-129 466.5 437 62.7
Zm00001eb057630 Zea mays HOM05D006809 ORTHO05D008609 2.5e-128 463.0 430 61.9
Pp3c18_4200 Physcomitrium patens HOM05D006809 ORTHO05D008609 1.6e-127 460.3 433 55.9
Mapoly0118s0024 Marchantia polymorpha HOM05D006809 ORTHO05D008609 2.1e-127 459.9 430 62.6
VMungo1309G1606 Vigna mungo HOM05D006809 ORTHO05D008609 6.8e-126 454.9 390 67.7
Ah.11g047550 Amaranthus hybridus HOM05D006809 ORTHO05D008609 1.3e-124 450.7 394 57.1
AagrBONN_evm.TU.Sc2ySwM_117.1929 Anthoceros agrestis HOM05D006809 ORTHO05D008609 1.3e-124 450.7 433 53.8
Nitab4.5_0001797g0090 Nicotiana tabacum HOM05D006809 ORTHO05D008609 1.0e-121 441.0 469 58.6
SGA_v2.0_scaffold313G48281 Striga asiatica HOM05D006809 ORTHO05D008609 8.1e-119 431.4 462 52.2
ATR0827G115 Amborella trichopoda HOM05D006809 ORTHO05D008609 4.0e-118 429.1 492 52.8
FvH4_5g13570 Fragaria vesca HOM05D006809 ORTHO05D008609 2.0e-117 426.8 334 71.9
Hund09945 Selenicereus undatus HOM05D006809 ORTHO05D008609 5.8e-117 425.2 430 55.1
Phvul.009G203000 Phaseolus vulgaris HOM05D006809 ORTHO05D008609 3.0e-113 412.9 331 64.0
Prupe.5G207700 Prunus persica HOM05D006809 ORTHO05D008609 1.6e-111 407.1 386 62.7
Hma1.2p1_0060F.1_g032870 Hydrangea macrophylla HOM05D006809 ORTHO05D008609 1.8e-110 403.7 441 51.5
AUR62032115 Chenopodium quinoa HOM05D006809 ORTHO05D008609 1.4e-107 394.0 445 53.5
SMO358G0618 Selaginella moellendorffii HOM05D006809 ORTHO05D008609 1.1e-102 377.9 420 57.4
Thecc.K0005900 Theobroma cacao HOM05D006809 ORTHO05D008609 5.8e-101 372.1 264 70.1
AUR62039658 Chenopodium quinoa HOM05D006809 ORTHO05D008609 6.2e-95 352.1 431 51.5
Atru.chr9.503 Acer truncatum HOM05D006809 ORTHO05D008609 6.0e-90 335.5 435 52.6
TPR.G23013 Trifolium pratense HOM05D007385 ORTHO05D009349 5.5e-75 285.8 292 62.7
vmacro17627 Vaccinium macrocarpon HOM05D006809 ORTHO05D008609 2.2e-71 273.9 332 46.7
CDE10G1159 Ceratophyllum demersum HOM05D006809 ORTHO05D008609 4.5e-69 266.2 266 56.0
Psat1g128360 Pisum sativum HOM05D006809 ORTHO05D008609 2.0e-64 250.8 220 72.3
Peaxi162Scf01223g00014 Petunia axillaris HOM05D006809 ORTHO05D008609 5.9e-61 239.2 239 55.2
Ah.11g047540 Amaranthus hybridus HOM05D006809 ORTHO05D008609 1.3e-52 211.5 397 36.0
Haze_26316 Corylus avellana HOM05D006809 ORTHO05D008609 3.2e-51 206.8 330 38.2
vmacro17626 Vaccinium macrocarpon HOM05D006809 ORTHO05D008609 3.6e-50 203.4 189 65.6
Solyc12g038527.1 Solanum lycopersicum HOM05D006809 ORTHO05D008609 3.0e-49 200.3 142 66.2
PGSC0003DMG400023259 Solanum tuberosum HOM05D006809 ORTHO05D008609 4.1e-46 189.9 162 77.2
CBR_g41384 Chara braunii HOM05D006809 ORTHO05D000002 5.0e-44 183.0 188 63.8
Glyma.04G160301 Glycine max HOM05D006809 ORTHO05D008609 3.1e-38 163.7 147 76.2
Medtr6g088180 Medicago truncatula HOM05D006809 ORTHO05D008609 4.6e-29 133.3 180 47.2
MD14G1214500 Malus domestica HOM05D006809 ORTHO05D008609 6.2e-26 122.9 91 69.2
CDE10G1173 Ceratophyllum demersum HOM05D006809 ORTHO05D008609 2.6e-24 117.5 114 49.1
Medtr2g060475 Medicago truncatula HOM05D006809 ORTHO05D008609 4.4e-24 116.7 63 73.0
Solyc12g038523.1 Solanum lycopersicum HOM05D006809 ORTHO05D008609 3.7e-23 113.6 101 59.4
arahy.Tifrunner.gnm1.ann1.BJ4A4M Arachis hypogaea HOM05D006809 ORTHO05D008609 1.6e-21 108.2 79 74.7
Psat6g135880 Pisum sativum HOM05D006809 ORTHO05D008609 3.5e-21 107.1 139 45.3
CAN.G131.10 Capsicum annuum HOM05D006809 ORTHO05D008609 4.6e-21 106.7 130 53.8
Solyc12g038550.1 Solanum lycopersicum HOM05D006809 ORTHO05D008609 3.0e-20 104.0 62 66.1
MD14G1214700 Malus domestica HOM05D006809 ORTHO05D008609 2.5e-19 100.9 130 51.5
SEGI_19563 Sequoiadendron giganteum HOM05D006809 ORTHO05D008609 2.6e-16 90.9 62 69.4
Psat1g128400 Pisum sativum HOM05D006809 ORTHO05D008609 2.2e-15 87.8 63 73.0
CBR_g71889 Chara braunii HOM05D006809 ORTHO05D008609 3.5e-13 80.5 75 50.7
Thecc.03G286100 Theobroma cacao HOM05D006809 ORTHO05D008609 1.7e-12 78.2 50 72.0
MD14G1214400 Malus domestica HOM05D006809 ORTHO05D008609 5.1e-12 76.6 41 73.2
SEGI_17180 Sequoiadendron giganteum HOM05D006809 ORTHO05D008609 8.6e-12 75.9 82 50.0
Duzib192G0624 Durio zibethinus HOM05D000836 ORTHO05D000709 8.9e-09 65.9 266 25.9
Gohir.A11G137400 Gossypium hirsutum HOM05D000836 ORTHO05D000709 8.9e-09 65.9 218 25.7
RcHm_v2.0_Chr5g0008731 Rosa chinensis HOM05D000836 ORTHO05D000709 8.9e-09 65.9 251 24.7
Potri.008G171600 Populus trichocarpa HOM05D003335 ORTHO05D003853 1.2e-08 65.5 211 23.2
Potri.010G066000 Populus trichocarpa HOM05D003335 ORTHO05D003853 1.2e-08 65.5 211 23.2
Thecc.06G184900 Theobroma cacao HOM05D000836 ORTHO05D000709 1.2e-08 65.5 177 28.2
FvH4_3g08980 Fragaria vesca HOM05D000836 ORTHO05D000709 1.5e-08 65.1 248 23.8
Zm00001eb336880 Zea mays HOM05D000836 ORTHO05D000709 2.6e-08 64.3 293 25.3
FAN21G2139 Fragaria x ananassa HOM05D000836 ORTHO05D000709 3.4e-08 63.9 224 24.6
Gohir.D11G143800 Gossypium hirsutum HOM05D000836 ORTHO05D000709 4.4e-08 63.5 218 25.7
Lj4C739G4 Lonicera japonica HOM05D000921 ORTHO05D004782 7.6e-08 62.8 326 24.8
THA.LOC104801044 Tarenaya hassleriana HOM05D000836 ORTHO05D000709 7.6e-08 62.8 205 24.9
Medtr2g061440 Medicago truncatula HOM05D002527 ORTHO05D001267 9.9e-08 62.4 40 70.0
FAN16G1410 Fragaria x ananassa HOM05D000836 ORTHO05D000709 1.7e-07 61.6 218 25.7
Gorai.007G154000 Gossypium raimondii HOM05D000836 ORTHO05D000709 2.9e-07 60.8 211 24.2
Manes.15G045400 Manihot esculenta HOM05D003335 ORTHO05D003853 2.9e-07 60.8 205 22.9
Nn1g06482 Nelumbo nucifera HOM05D000836 ORTHO05D000709 2.9e-07 60.8 145 31.7
Solyc05g026480.2 Solanum lycopersicum HOM05D000836 ORTHO05D000709 2.9e-07 60.8 177 31.6
Sopen05g022910 Solanum pennellii HOM05D000836 ORTHO05D000709 2.9e-07 60.8 178 29.8
FAN17G0254 Fragaria x ananassa HOM05D000836 ORTHO05D000709 3.7e-07 60.5 219 22.4
RcHm_v2.0_Chr6g0308111 Rosa chinensis HOM05D002332 ORTHO05D002509 3.7e-07 60.5 214 23.4
Prupe.7G235500 Prunus persica HOM05D000836 ORTHO05D000709 4.9e-07 60.1 187 28.9
THA.LOC104809014 Tarenaya hassleriana HOM05D000836 ORTHO05D000709 4.9e-07 60.1 198 28.3
Eucgr.H00801 Eucalyptus grandis HOM05D000836 ORTHO05D000709 6.4e-07 59.7 205 24.4
Rhsim02G0132200 Rhododendron simsii HOM05D000836 ORTHO05D000709 8.4e-07 59.3 214 25.2
CDE06G0876 Ceratophyllum demersum HOM05D000645 ORTHO05D008274 1.1e-06 58.9 220 23.2
Eucgr.H00067 Eucalyptus grandis HOM05D000836 ORTHO05D000709 1.1e-06 58.9 194 25.3
Eucgr.L01754 Eucalyptus grandis HOM05D000836 ORTHO05D000709 1.1e-06 58.9 202 25.7
Gorai.010G256200 Gossypium raimondii HOM05D000836 ORTHO05D000709 1.1e-06 58.9 170 26.5
Lalb_Chr13g0302231 Lupinus albus HOM05D000836 ORTHO05D000709 1.1e-06 58.9 200 23.5
Glyma.05G011800 Glycine max HOM05D000836 ORTHO05D000709 1.4e-06 58.5 191 26.7
Lalb_Chr20g0121721 Lupinus albus HOM05D000836 ORTHO05D000709 1.4e-06 58.5 229 25.8
Gohir.D06G210166 Gossypium hirsutum HOM05D000836 ORTHO05D000709 1.9e-06 58.2 170 26.5
Rhsim06G0071200 Rhododendron simsii HOM05D000921 ORTHO05D004782 1.9e-06 58.2 231 25.5
unitig_32.g11669 Utricularia gibba HOM05D000836 ORTHO05D000709 1.9e-06 58.2 185 26.5
MSTRG.11746 Avicennia marina HOM05D000836 ORTHO05D000709 2.4e-06 57.8 185 25.4
MSTRG.13994 Avicennia marina HOM05D000836 ORTHO05D000709 2.4e-06 57.8 183 26.2
BcaB05g22960 Brassica carinata HOM05D002332 ORTHO05D002509 2.4e-06 57.8 208 23.1
Glyma.04G070200 Glycine max HOM05D000836 ORTHO05D000709 3.2e-06 57.4 185 25.4
Glyma.06G072200 Glycine max HOM05D000836 ORTHO05D000709 3.2e-06 57.4 185 25.4
Medtr4g088675 Medicago truncatula HOM05D000836 ORTHO05D000709 3.2e-06 57.4 120 31.7
Phvul.003G159500 Phaseolus vulgaris HOM05D000836 ORTHO05D000709 3.2e-06 57.4 194 24.7
GSVIVG01015458001 Vitis vinifera HOM05D000836 ORTHO05D000709 3.2e-06 57.4 200 24.0
Carub.0002s0634 Capsella rubella HOM05D000921 ORTHO05D004782 4.1e-06 57.0 221 24.0
Cpa.g.c29144.2 Carica papaya HOM05D000836 ORTHO05D000709 5.4e-06 56.6 207 26.1
QL02p086475 Quercus lobata HOM05D000836 ORTHO05D000709 5.4e-06 56.6 195 23.6
Manes.18G038500 Manihot esculenta HOM05D002332 ORTHO05D002509 7.1e-06 56.2 200 22.5
Haze_25664 Corylus avellana HOM05D000836 ORTHO05D000709 9.2e-06 55.8 201 23.9
PGR142G1073 Punica granatum HOM05D000836 ORTHO05D000709 9.2e-06 55.8 194 23.7
Sc08g0007060 Simmondsia chinensis HOM05D000836 ORTHO05D000709 9.2e-06 55.8 185 25.4
vmacro21345 Vaccinium macrocarpon HOM05D000921 ORTHO05D004782 9.2e-06 55.8 298 24.8


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