Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp2g16670 Schrenkiella parvula HOM05D001715 ORTHO05D004824 2.3e-148 528.9 270 100.0
AL5G16870 Arabidopsis lyrata HOM05D001715 ORTHO05D004824 3.0e-143 511.9 273 95.6
BcaC06g30988 Brassica carinata HOM05D001715 ORTHO05D004824 1.5e-142 509.6 273 96.0
BcaC06g33817 Brassica carinata HOM05D001715 ORTHO05D004824 2.5e-142 508.8 271 96.7
BolC7t44170H Brassica oleracea HOM05D001715 ORTHO05D004824 4.3e-142 508.1 273 96.0
C07p36500 Brassica napus HOM05D001715 ORTHO05D003849 5.6e-142 507.7 272 96.0
Carub.0005s0587 Capsella rubella HOM05D001715 ORTHO05D004824 1.6e-141 506.1 273 95.2
CARHR148830 Cardamine hirsuta HOM05D001715 ORTHO05D004824 2.1e-141 505.8 272 95.2
A06p41160 Brassica napus HOM05D001715 ORTHO05D003849 6.2e-141 504.2 272 95.6
Thhalv10004728m.g Eutrema salsugineum HOM05D001715 ORTHO05D004824 1.2e-139 500.0 286 91.3
Aa31LG2G5160 Aethionema arabicum HOM05D001715 ORTHO05D004824 6.4e-138 494.2 271 92.6
Carub.0007s3497 Capsella rubella HOM05D001715 ORTHO05D004824 5.4e-137 491.1 272 91.9
THA.LOC104825315 Tarenaya hassleriana HOM05D001715 ORTHO05D004824 3.5e-136 488.4 271 92.3
AT5G40550 Arabidopsis thaliana HOM05D001715 ORTHO05D004824 7.8e-136 487.3 270 91.5
THA.LOC104805361 Tarenaya hassleriana HOM05D001715 ORTHO05D004824 1.3e-135 486.5 271 91.5
AL7G49260 Arabidopsis lyrata HOM05D001715 ORTHO05D004824 1.5e-134 483.0 272 90.4
CARHR261430 Cardamine hirsuta HOM05D001715 ORTHO05D004824 7.3e-134 480.7 271 90.0
THA.LOC104823958 Tarenaya hassleriana HOM05D001715 ORTHO05D004824 1.2e-125 453.4 270 86.3
A02p35490 Brassica napus HOM05D001715 ORTHO05D003849 1.9e-121 439.5 274 83.2
C02p54210 Brassica napus HOM05D001715 ORTHO05D003849 5.4e-121 438.0 274 83.2
COL.COLO4_29175 Corchorus olitorius HOM05D001715 ORTHO05D004824 7.1e-121 437.6 269 83.3
Duzib147G1449 Durio zibethinus HOM05D001715 ORTHO05D004824 9.3e-121 437.2 269 81.8
Manes.17G110800 Manihot esculenta HOM05D001715 ORTHO05D004824 2.7e-120 435.6 269 81.4
Thecc.04G019800 Theobroma cacao HOM05D001715 ORTHO05D004824 1.0e-119 433.7 269 82.2
Potri.001G342700 Populus trichocarpa HOM05D001715 ORTHO05D004824 3.0e-119 432.2 271 81.5
FvH4_1g25240 Fragaria vesca HOM05D001715 ORTHO05D004824 5.1e-119 431.4 268 78.7
Gohir.D11G070100 Gossypium hirsutum HOM05D001715 ORTHO05D004824 1.1e-118 430.3 269 81.4
Gorai.007G075200 Gossypium raimondii HOM05D001715 ORTHO05D004824 1.1e-118 430.3 269 81.4
AT3G27460 Arabidopsis thaliana HOM05D001715 ORTHO05D004824 1.5e-118 429.9 232 94.8
BraA02t08550Z Brassica rapa HOM05D001715 ORTHO05D003849 9.6e-118 427.2 319 72.7
MD17G1021800 Malus domestica HOM05D001715 ORTHO05D004824 1.6e-117 426.4 271 79.0
FAN19G0324 Fragaria x ananassa HOM05D001715 ORTHO05D004824 3.6e-117 425.2 268 78.4
BraA06t27038Z Brassica rapa HOM05D001715 ORTHO05D004824 4.8e-117 424.9 234 94.9
Ciclev10016259m.g Citrus clementina HOM05D001715 ORTHO05D004824 4.8e-117 424.9 271 79.7
FAN28G2154 Fragaria x ananassa HOM05D001715 ORTHO05D004824 6.2e-117 424.5 269 78.8
BolC2t11484H Brassica oleracea HOM05D001715 ORTHO05D004824 8.1e-117 424.1 277 80.9
Dinv33423 Davidia involucrata HOM05D001715 ORTHO05D004824 3.1e-116 422.2 269 79.2
CiPaw.03G045800 Carya illinoinensis HOM05D001715 ORTHO05D004824 5.3e-116 421.4 269 77.7
Gohir.A07G224000 Gossypium hirsutum HOM05D001715 ORTHO05D004824 5.3e-116 421.4 269 79.9
Prupe.3G294200 Prunus persica HOM05D001715 ORTHO05D004824 1.5e-115 419.9 271 77.5
Gohir.D07G231300 Gossypium hirsutum HOM05D001715 ORTHO05D004824 2.0e-115 419.5 269 79.6
Gorai.001G266400 Gossypium raimondii HOM05D001715 ORTHO05D004824 2.0e-115 419.5 269 79.6
Lsat_1_v5_gn_4_184360 Lactuca sativa HOM05D001715 ORTHO05D004824 2.6e-115 419.1 269 77.7
BcaB07g30155 Brassica carinata HOM05D001715 ORTHO05D004824 3.4e-115 418.7 277 81.9
Gohir.D04G058700 Gossypium hirsutum HOM05D001715 ORTHO05D004824 3.4e-115 418.7 269 79.9
Atru.chr6.2434 Acer truncatum HOM05D001715 ORTHO05D004824 4.4e-115 418.3 270 79.3
Gohir.A05G354400 Gossypium hirsutum HOM05D001715 ORTHO05D004824 4.4e-115 418.3 269 80.3
Gorai.012G065400 Gossypium raimondii HOM05D001715 ORTHO05D004824 9.9e-115 417.2 269 79.6
RcHm_v2.0_Chr2g0123161 Rosa chinensis HOM05D001715 ORTHO05D004824 1.3e-114 416.8 268 76.9
PGR083G0973 Punica granatum HOM05D001715 ORTHO05D004824 1.7e-114 416.4 269 76.2
MD09G1022400 Malus domestica HOM05D001715 ORTHO05D004824 2.9e-114 415.6 270 77.4
HanXRQChr09g0255491 Helianthus annuus HOM05D001715 ORTHO05D004824 6.4e-114 414.5 270 76.7
Cc07_g00030 Coffea canephora HOM05D001715 ORTHO05D004824 8.4e-114 414.1 269 77.7
Hma1.2p1_1747F.1_g300590 Hydrangea macrophylla HOM05D001715 ORTHO05D004824 3.2e-113 412.1 271 76.8
Duzib187G0323 Durio zibethinus HOM05D001715 ORTHO05D004824 4.2e-113 411.8 269 78.1
Lju41A43T27 Lonicera japonica HOM05D001715 ORTHO05D004824 9.3e-113 410.6 281 74.0
TWI12G0217 Tripterygium wilfordii HOM05D001715 ORTHO05D004824 1.6e-112 409.8 271 75.3
Lj1g0020864 Lotus japonicus HOM05D001715 ORTHO05D004824 6.0e-112 407.9 271 73.4
CSS0010910 Camellia sinensis var. sinensis HOM05D001715 ORTHO05D004824 1.0e-111 407.1 270 76.7
FAN23G2554 Fragaria x ananassa HOM05D001715 ORTHO05D004824 1.0e-111 407.1 279 74.2
Glyma.19G055900 Glycine max HOM05D001715 ORTHO05D004824 1.7e-111 406.4 271 73.4
Sabra16G0222300 Salix brachista HOM05D001715 ORTHO05D004824 1.7e-111 406.4 296 72.3
DCAR_015064 Daucus carota HOM05D001715 ORTHO05D004824 2.3e-111 406.0 270 74.1
CANSAT64G1664 Cannabis sativa HOM05D001715 ORTHO05D004824 3.0e-111 405.6 270 75.6
Psat3g166200 Pisum sativum HOM05D001715 ORTHO05D004824 5.1e-111 404.8 268 73.5
Actinidia36126 Actinidia chinensis HOM05D001715 ORTHO05D004824 1.9e-110 402.9 270 75.6
Actinidia05979 Actinidia chinensis HOM05D001715 ORTHO05D004824 2.5e-110 402.5 270 74.8
Glyma.16G069000 Glycine max HOM05D001715 ORTHO05D004824 2.5e-110 402.5 269 72.9
Lalb_Chr22g0360701 Lupinus albus HOM05D001715 ORTHO05D004824 3.3e-110 402.1 270 73.7
TWI12G0250 Tripterygium wilfordii HOM05D001715 ORTHO05D004824 4.3e-110 401.7 271 74.2
TWI12G0380 Tripterygium wilfordii HOM05D001715 ORTHO05D004824 4.3e-110 401.7 271 74.2
TPR.G1113 Trifolium pratense HOM05D001715 ORTHO05D004824 5.6e-110 401.4 270 73.0
TWI12G0372 Tripterygium wilfordii HOM05D001715 ORTHO05D004824 9.6e-110 400.6 271 74.2
Lalb_Chr24g0403561 Lupinus albus HOM05D001715 ORTHO05D004824 1.3e-109 400.2 268 72.8
MD17G1021900 Malus domestica HOM05D001715 ORTHO05D004824 4.8e-109 398.3 271 74.9
VMungo1383G3508 Vigna mungo HOM05D001715 ORTHO05D004824 6.2e-109 397.9 270 71.1
Medtr7g033200 Medicago truncatula HOM05D001715 ORTHO05D004824 1.4e-108 396.7 270 72.6
Ca_10003_v3 Cicer arietinum L. HOM05D001715 ORTHO05D004824 1.8e-108 396.4 270 72.6
Cfa007336 Carpinus fangiana HOM05D001715 ORTHO05D004824 2.4e-108 396.0 272 73.9
Phvul.001G096400 Phaseolus vulgaris HOM05D001715 ORTHO05D004824 2.4e-108 396.0 271 70.8
BcaC03g17465 Brassica carinata HOM05D001715 ORTHO05D003849 1.1e-105 387.1 265 79.2
Sopen02g038180 Solanum pennellii HOM05D001715 ORTHO05D004824 3.2e-105 385.6 268 72.8
HanXRQChr15g0486831 Helianthus annuus HOM05D001715 ORTHO05D004824 1.6e-104 383.3 269 73.2
Eucgr.J02260 Eucalyptus grandis HOM05D001715 ORTHO05D004824 2.1e-104 382.9 270 72.2
TAR622G0120 Trochodendron aralioides HOM05D001715 ORTHO05D004824 2.1e-104 382.9 272 72.8
GSVIVG01032368001 Vitis vinifera HOM05D001715 ORTHO05D004824 2.1e-104 382.9 281 70.1
MSTRG.24047 Avicennia marina HOM05D001715 ORTHO05D004824 2.7e-104 382.5 271 72.7
TAR374G1502 Trochodendron aralioides HOM05D001715 ORTHO05D004824 2.7e-104 382.5 271 72.3
Haze_14762 Corylus avellana HOM05D001715 ORTHO05D004824 7.9e-104 380.9 328 61.3
Solyc02g093490.3 Solanum lycopersicum HOM05D001715 ORTHO05D004824 7.9e-104 380.9 269 72.5
ClCG10G013770 Citrullus lanatus HOM05D001715 ORTHO05D004824 1.0e-103 380.6 270 74.4
PGSC0003DMG400012610 Solanum tuberosum HOM05D001715 ORTHO05D004824 1.0e-103 380.6 269 72.5
PSO063G0233 Papaver somniferum HOM05D001715 ORTHO05D004824 1.8e-103 379.8 271 71.6
PSO754G0079 Papaver somniferum HOM05D001715 ORTHO05D004824 1.8e-103 379.8 271 71.6
CsaV3_3G042890 Cucumis sativus L. HOM05D001715 ORTHO05D004824 2.3e-103 379.4 270 73.7
Ah.02g128230 Amaranthus hybridus HOM05D001715 ORTHO05D004824 5.1e-103 378.3 269 70.6
arahy.Tifrunner.gnm1.ann1.VP8W98 Arachis hypogaea HOM05D001715 ORTHO05D004824 6.7e-103 377.9 271 71.2
PGR142G0496 Punica granatum HOM05D001715 ORTHO05D004824 6.7e-103 377.9 268 73.1
arahy.Tifrunner.gnm1.ann1.Q5RJ9B Arachis hypogaea HOM05D001715 ORTHO05D004824 1.1e-102 377.1 273 70.7
Peaxi162Scf00420g00131 Petunia axillaris HOM05D001715 ORTHO05D004824 1.1e-102 377.1 297 66.3
QL05p032480 Quercus lobata HOM05D001715 ORTHO05D004824 3.3e-102 375.6 304 64.8
QL05p033603 Quercus lobata HOM05D001715 ORTHO05D004824 3.3e-102 375.6 304 64.8
vmacro07988 Vaccinium macrocarpon HOM05D001715 ORTHO05D004824 2.1e-101 372.9 285 69.5
Dinv25723 Davidia involucrata HOM05D001715 ORTHO05D004510 2.8e-101 372.5 255 75.7
MELO3C026589.2 Cucumis melo HOM05D001715 ORTHO05D004824 4.8e-101 371.7 270 74.4
Aqoxy5G03737 Aquilegia oxysepala HOM05D001715 ORTHO05D004824 6.2e-101 371.3 272 69.9
SHI03767 Sapria himalayana HOM05D001715 ORTHO05D004824 1.4e-100 370.2 266 69.9
Cpa.g.sc108.80 Carica papaya HOM05D001715 ORTHO05D004824 2.4e-100 369.4 232 81.0
Manes.15G152100 Manihot esculenta HOM05D001715 ORTHO05D004824 3.1e-100 369.0 235 79.6
MSTRG.3136 Avicennia marina HOM05D001715 ORTHO05D004824 4.0e-100 368.6 269 71.0
Lj7A601T103 Lonicera japonica HOM05D001715 ORTHO05D004824 4.0e-100 368.6 291 64.3
Rhsim10G0014300 Rhododendron simsii HOM05D001715 ORTHO05D004824 5.3e-100 368.2 275 70.9
Ca_12396_v3 Cicer arietinum L. HOM05D001715 ORTHO05D004824 5.8e-99 364.8 341 57.5
unitig_748.g6979 Utricularia gibba HOM05D001715 ORTHO05D004824 1.4e-97 360.1 252 71.0
Hund15533 Selenicereus undatus HOM05D001715 ORTHO05D004824 1.6e-96 356.7 273 68.5
Migut.H00070 Erythranthe guttata HOM05D001715 ORTHO05D004824 2.1e-96 356.3 271 69.0
CDE04G1703 Ceratophyllum demersum HOM05D001715 ORTHO05D004824 3.5e-96 355.5 271 68.6
SGA_v2.0_scaffold18G08270 Striga asiatica HOM05D001715 ORTHO05D004824 6.0e-96 354.8 260 70.8
Gohir.A11G065900 Gossypium hirsutum HOM05D001715 ORTHO05D004824 7.9e-96 354.4 230 78.7
CDE07G0729 Ceratophyllum demersum HOM05D001715 ORTHO05D004824 1.8e-95 353.2 271 68.3
AUR62033204 Chenopodium quinoa HOM05D001715 ORTHO05D004824 5.7e-94 348.2 330 59.4
HPP92_019596 Vanilla planifolia HOM05D001715 ORTHO05D004824 3.7e-93 345.5 271 64.6
Zm00001eb409000 Zea mays HOM05D001715 ORTHO05D004824 1.9e-89 333.2 266 65.4
ATR0824G003 Amborella trichopoda HOM05D001715 ORTHO05D004824 1.1e-86 323.9 277 64.6
Oeu035801.2 Olea europaea HOM05D001715 ORTHO05D004824 3.3e-86 322.4 234 68.8
CAN.G473.27 Capsicum annuum HOM05D001715 ORTHO05D004824 2.2e-85 319.7 240 68.8
Sc03g0007260 Simmondsia chinensis HOM05D001715 ORTHO05D004824 2.8e-85 319.3 230 69.6
unitig_0.g1597 Utricularia gibba HOM05D004929 ORTHO05D006492 2.6e-83 312.8 272 60.7
Sed0015141 Sechium edule HOM05D001715 ORTHO05D004824 5.0e-82 308.5 229 70.7
MBI11_g21317_MAGBIO Magnolia biondii HOM05D001715 ORTHO05D004824 1.9e-81 306.6 358 52.0
FAN26G1929 Fragaria x ananassa HOM05D001715 ORTHO05D004824 1.4e-79 300.4 283 59.0
QL02p073949 Quercus lobata HOM05D001715 ORTHO05D004824 8.8e-79 297.7 336 52.4
Nitab4.5_0006683g0120 Nicotiana tabacum HOM05D001715 ORTHO05D004824 4.3e-78 295.4 269 61.7
arahy.Tifrunner.gnm1.ann1.3H0FM5 Arachis hypogaea HOM05D001715 ORTHO05D004824 1.4e-76 290.4 289 56.4
Os12g0290600 Oryza sativa ssp. japonica HOM05D001715 ORTHO05D004824 2.0e-75 286.6 267 59.6
Nn4g22578 Nelumbo nucifera HOM05D001715 ORTHO05D004824 4.5e-75 285.4 225 68.9
Duzib187G0149 Durio zibethinus HOM05D001715 ORTHO05D004824 8.8e-71 271.2 180 74.4
CSS0002803 Camellia sinensis var. sinensis HOM05D001715 ORTHO05D004824 3.3e-70 269.2 198 70.2
BolC2t11492H Brassica oleracea HOM05D001715 ORTHO05D004824 6.3e-69 265.0 165 82.4
Duzib264G0165 Durio zibethinus HOM05D001715 ORTHO05D004824 2.4e-68 263.1 179 76.5
SEGI_05213 Sequoiadendron giganteum HOM05D001715 ORTHO05D004824 2.4e-68 263.1 265 54.7
Peaxi162Scf00700g00435 Petunia axillaris HOM05D001715 ORTHO05D004824 3.1e-68 262.7 228 59.6
Gorai.001G266500 Gossypium raimondii HOM05D001715 ORTHO05D004824 2.9e-66 256.1 173 75.1
Mapoly0074s0018 Marchantia polymorpha HOM05D001715 ORTHO05D004824 3.8e-66 255.8 269 52.0
SMO119G0416 Selaginella moellendorffii HOM05D001715 ORTHO05D004824 2.5e-65 253.1 274 51.8
AUR62041236 Chenopodium quinoa HOM05D001715 ORTHO05D004824 4.2e-65 252.3 201 67.7
C02p54270 Brassica napus HOM05D001715 ORTHO05D004824 5.5e-65 251.9 158 82.3
Pp3c18_8800 Physcomitrium patens HOM05D001715 ORTHO05D004824 1.6e-64 250.4 259 53.3
Pp3c21_7830 Physcomitrium patens HOM05D001715 ORTHO05D004824 1.4e-63 247.3 259 51.7
Rhsim08G0048300 Rhododendron simsii HOM05D001715 ORTHO05D004824 6.7e-63 245.0 269 52.4
SGA_v2.0_scaffold47G17520 Striga asiatica HOM05D001715 ORTHO05D004824 8.8e-63 244.6 227 59.5
Medtr7g033170 Medicago truncatula HOM05D001715 ORTHO05D004824 2.2e-61 240.0 171 67.3
Nitab4.5_0001562g0140 Nicotiana tabacum HOM05D001715 ORTHO05D004824 2.2e-58 229.9 162 74.1
PSO478G2184 Papaver somniferum HOM05D001715 ORTHO05D004824 4.2e-57 225.7 148 73.0
Rhsim10G0017400 Rhododendron simsii HOM05D001715 ORTHO05D004824 7.0e-52 208.4 257 51.0
EL10As9g23941 Beta vulgaris HOM05D001715 ORTHO05D004824 1.2e-51 207.6 169 64.5
Gohir.D07G231366 Gossypium hirsutum HOM05D001715 ORTHO05D004824 1.6e-51 207.2 125 81.6
ECA232G3480 Erigeron canadensis HOM05D001715 ORTHO05D004824 2.2e-50 203.4 131 75.6
Cc07_g20220 Coffea canephora HOM05D001715 ORTHO05D004824 5.0e-50 202.2 211 52.1
Aa31LG9G1060 Aethionema arabicum HOM05D004782 ORTHO05D005498 1.6e-48 197.2 231 51.5
CBR_g1018 Chara braunii HOM05D001161 ORTHO05D000497 2.0e-46 190.3 151 66.2
AagrBONN_evm.TU.Sc2ySwM_344.5345 Anthoceros agrestis HOM05D001715 ORTHO05D004824 1.3e-45 187.6 234 47.0
vmacro18295 Vaccinium macrocarpon HOM05D001715 ORTHO05D004824 2.3e-42 176.8 201 52.2
SGA_v2.0_scaffold135G34914 Striga asiatica HOM05D001715 ORTHO05D004824 2.1e-40 170.2 130 70.0
SEGI_27231 Sequoiadendron giganteum HOM05D001715 ORTHO05D004824 5.0e-34 149.1 136 56.6
vmacro18298 Vaccinium macrocarpon HOM05D001715 ORTHO05D004824 1.1e-33 147.9 177 49.7
SGA_v2.0_scaffold131G34424 Striga asiatica HOM05D001715 ORTHO05D004824 4.3e-33 146.0 270 36.7
vmacro18296 Vaccinium macrocarpon HOM05D001715 ORTHO05D004824 6.2e-32 142.1 160 51.2
Aqoxy3G03035 Aquilegia oxysepala HOM05D001715 ORTHO05D004824 1.6e-27 127.5 148 52.7
Oeu033726.1 Olea europaea HOM05D001715 ORTHO05D004824 6.0e-27 125.6 88 69.3
CiPaw.15G158300 Carya illinoinensis HOM05D001715 ORTHO05D004824 1.3e-26 124.4 90 68.9
Oeu021199.1 Olea europaea HOM05D001715 ORTHO05D004824 8.1e-24 115.2 74 74.3
CiPaw.15G157800 Carya illinoinensis HOM05D001715 ORTHO05D004824 2.9e-21 106.7 70 71.4
Mapoly0009s0091 Marchantia polymorpha HOM05D001715 ORTHO05D004824 1.6e-19 100.9 174 37.4
vmacro18297 Vaccinium macrocarpon HOM05D001715 ORTHO05D004824 1.7e-18 97.4 69 69.6
Oeu043035.1 Olea europaea HOM05D001715 ORTHO05D004824 5.6e-17 92.4 74 60.8
HPP92_019650 Vanilla planifolia HOM05D001715 ORTHO05D004824 1.0e-10 71.6 126 38.1
CSS0027227 Camellia sinensis var. sinensis HOM05D001715 ORTHO05D004824 3.9e-10 69.7 138 36.2
SEGI_06119 Sequoiadendron giganteum HOM05D001715 ORTHO05D000497 7.3e-09 65.5 41 75.6
CSS0016932 Camellia sinensis var. sinensis HOM05D001715 ORTHO05D004824 2.8e-08 63.5 41 75.6
CSS0014250 Camellia sinensis var. sinensis HOM05D001715 ORTHO05D004824 3.1e-07 60.1 34 82.4


User provided reference genes

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