Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp2g14570 Schrenkiella parvula HOM05D009656 ORTHO05D011940 7.1e-68 261.2 132 100.0
C07p34100 Brassica napus HOM05D009656 ORTHO05D011940 5.7e-41 171.8 131 72.5
BolC7t43924H Brassica oleracea HOM05D009656 ORTHO05D011940 5.7e-41 171.8 131 72.5
Thhalv10004937m.g Eutrema salsugineum HOM05D009656 ORTHO05D011940 9.0e-39 164.5 124 72.6
AT2G03740 Arabidopsis thaliana HOM05D009656 ORTHO05D011940 4.5e-38 162.2 132 68.2
A06p42920 Brassica napus HOM05D009656 ORTHO05D011940 1.3e-37 160.6 131 69.5
CARHR146250 Cardamine hirsuta HOM05D009656 ORTHO05D011940 2.2e-37 159.8 135 66.7
AL5G13530 Arabidopsis lyrata HOM05D009656 ORTHO05D011940 2.9e-37 159.5 132 67.4
BcaC06g31167 Brassica carinata HOM05D009656 ORTHO05D011940 2.9e-37 159.5 131 69.5
CARHR146130 Cardamine hirsuta HOM05D009656 ORTHO05D011940 8.5e-37 157.9 126 66.7
Sp2g14560 Schrenkiella parvula HOM05D009656 ORTHO05D011940 4.2e-36 155.6 134 63.4
AT2G03850 Arabidopsis thaliana HOM05D009656 ORTHO05D011940 1.2e-35 154.1 136 65.4
AL5G13670 Arabidopsis lyrata HOM05D009656 ORTHO05D011940 3.6e-35 152.5 134 64.9
BcaC03g17233 Brassica carinata HOM05D009656 ORTHO05D011940 6.7e-34 148.3 129 61.2
C02p51680 Brassica napus HOM05D009656 ORTHO05D011940 6.7e-34 148.3 129 61.2
BolC2t11254H Brassica oleracea HOM05D009656 ORTHO05D011940 6.7e-34 148.3 129 61.2
C02p51700 Brassica napus HOM05D009656 ORTHO05D011940 2.0e-33 146.7 129 60.5
Thhalv10004969m.g Eutrema salsugineum HOM05D009656 ORTHO05D011940 2.0e-33 146.7 130 61.5
BcaB07g30284 Brassica carinata HOM05D009656 ORTHO05D011940 4.3e-33 145.6 135 58.5
A02p33560 Brassica napus HOM05D009656 ORTHO05D011940 3.7e-32 142.5 126 60.3
BraA02t08377Z Brassica rapa HOM05D009656 ORTHO05D011940 3.7e-32 142.5 126 60.3
Carub.0005s0288 Capsella rubella HOM05D009656 ORTHO05D011940 5.9e-30 135.2 134 59.0
Carub.0005s0301 Capsella rubella HOM05D009656 ORTHO05D011940 6.5e-29 131.7 136 59.6
BcaC06g31156 Brassica carinata HOM05D009656 ORTHO05D011940 1.4e-18 97.4 75 69.3
Aa31LG1G24350 Aethionema arabicum HOM05D009656 ORTHO05D011940 6.5e-13 78.6 109 45.9
BcaB08g34599 Brassica carinata HOM05D009656 ORTHO05D094495 5.5e-12 75.5 52 75.0
CARHR016340 Cardamine hirsuta HOM05D009656 ORTHO05D017552 1.5e-09 67.4 76 55.3
AT1G15820 Arabidopsis thaliana HOM05D000133 ORTHO05D005407 7.5e-09 65.1 76 55.3
Sp4g24660 Schrenkiella parvula HOM05D010227 ORTHO05D012306 7.5e-09 65.1 131 41.2
AL1G27970 Arabidopsis lyrata HOM05D000133 ORTHO05D005407 1.7e-08 63.9 76 53.9
C05p14070 Brassica napus HOM05D000133 ORTHO05D005407 1.7e-08 63.9 76 53.9
BolC5t30138H Brassica oleracea HOM05D000133 ORTHO05D005407 1.7e-08 63.9 76 53.9
Thhalv10008533m.g Eutrema salsugineum HOM05D000133 ORTHO05D005407 1.7e-08 63.9 76 53.9
AT2G42530 Arabidopsis thaliana HOM05D010227 ORTHO05D012306 3.7e-08 62.8 135 40.7
A08p31490 Brassica napus HOM05D000133 ORTHO05D005407 3.7e-08 62.8 77 53.2
BraA08t35071Z Brassica rapa HOM05D000133 ORTHO05D005407 3.7e-08 62.8 77 53.2
Carub.0001s1561 Capsella rubella HOM05D000133 ORTHO05D005407 3.7e-08 62.8 76 52.6
A06p11890 Brassica napus HOM05D000133 ORTHO05D005407 6.3e-08 62.0 76 52.6
BraA06t24359Z Brassica rapa HOM05D000133 ORTHO05D005407 6.3e-08 62.0 76 52.6
THA.LOC104808189 Tarenaya hassleriana HOM05D000133 ORTHO05D005407 2.4e-07 60.1 77 49.4
Sp1g14130 Schrenkiella parvula HOM05D000133 ORTHO05D005407 4.1e-07 59.3 74 51.4
AL4G41070 Arabidopsis lyrata HOM05D010227 ORTHO05D012306 7.0e-07 58.5 135 40.0
BcaC01g05276 Brassica carinata HOM05D010227 ORTHO05D012306 7.0e-07 58.5 133 39.8
C03p28260 Brassica napus HOM05D010227 ORTHO05D012306 7.0e-07 58.5 133 39.8
Thhalv10017393m.g Eutrema salsugineum HOM05D010227 ORTHO05D012306 9.1e-07 58.2 132 35.6
A09p61150 Brassica napus HOM05D000133 ORTHO05D005407 1.2e-06 57.8 73 52.1
BraA09t41489Z Brassica rapa HOM05D000133 ORTHO05D005407 1.2e-06 57.8 73 52.1
Aa31LG7G410 Aethionema arabicum HOM05D000133 ORTHO05D005407 1.6e-06 57.4 77 48.1
BcaC07g41477 Brassica carinata HOM05D000133 ORTHO05D005407 1.6e-06 57.4 73 50.7
C08p44750 Brassica napus HOM05D000133 ORTHO05D005407 1.6e-06 57.4 73 50.7
BolC8t52021H Brassica oleracea HOM05D000133 ORTHO05D005407 1.6e-06 57.4 73 50.7
BolC3t15199H Brassica oleracea HOM05D010227 ORTHO05D012306 2.7e-06 56.6 133 39.1
AL4G41090 Arabidopsis lyrata HOM05D010227 ORTHO05D012306 3.5e-06 56.2 128 39.1
THA.LOC104812448 Tarenaya hassleriana HOM05D000133 ORTHO05D005407 7.7e-06 55.1 75 45.3


User provided reference genes

Program Settings