Gene: AT2G42530
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT2G42530
- Transcript Identifier AT2G42530.1
- Gene Type Coding gene
- Location Chr2 : 17709191-17709873 : negative
Gene Family Information
- ID HOM05D010227
- #Genes/#Species 23/10
- Phylogenetic origin
- ID ORTHO05D012306
- #Genes/#Species 23/10
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- tid AT2G42530.1
- symbol COR15B
- uniprot Q9SIN5
Descriptions
- Description cold regulated 15b
- Computational description cold regulated 15b (COR15B); INVOLVED IN: response to cold, defense response to fungus; LOCATED IN: chloroplast, chloroplast stroma, chloroplast envelope; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: cold-regulated 15a (TAIR:AT2G42540.2); Has 194 Blast hits to 148 proteins in 43 species: Archae - 0; Bacteria - 18; Metazoa - 5; Fungi - 6; Plants - 155; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009631 | IMP | Gene Ontology | cold acclimation | 1 |
| GO:0010150 | IMP | Gene Ontology | leaf senescence | 2 |
| GO:0009737 | IEP | Gene Ontology | response to abscisic acid | 2 |
| GO:0050832 | IEP | Gene Ontology | defense response to fungus | 3 |
| GO:0009409 | IEP | Gene Ontology | response to cold | 4 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0008289 | IEA | GOA Database | lipid binding | |
| GO:0008289 | IDA | Gene Ontology | lipid binding | 5 |
| GO:0005534 | IDA | Gene Ontology | galactose binding | 5 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009507 | IDA IEA | GOA Database | chloroplast | |
| GO:0009507 | HDA ISM | Gene Ontology | chloroplast | 6 |
| GO:0009536 | IEA | GOA Database | plastid | |
| GO:0009941 | IDA | GOA Database | chloroplast envelope | |
| GO:0009941 | HDA | Gene Ontology | chloroplast envelope | 7 |
| GO:0009570 | IDA IEA | GOA Database | chloroplast stroma | |
| GO:0009570 | HDA | Gene Ontology | chloroplast stroma | 8 |
| GO:0019898 | IDA | Gene Ontology | extrinsic component of membrane | 9 |
| GO:0005829 | HDA | Gene Ontology | cytosol | 10 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
No InterPro domains detected for this gene.
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |