Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp2g14560 Schrenkiella parvula HOM05D009656 ORTHO05D011940 1.3e-73 280.0 192 100.0
BcaB07g30284 Brassica carinata HOM05D009656 ORTHO05D011940 6.5e-52 208.0 145 78.6
BcaC03g17233 Brassica carinata HOM05D009656 ORTHO05D011940 3.1e-46 189.1 145 73.1
C02p51680 Brassica napus HOM05D009656 ORTHO05D011940 3.1e-46 189.1 145 73.1
BolC2t11254H Brassica oleracea HOM05D009656 ORTHO05D011940 3.1e-46 189.1 145 73.1
C02p51700 Brassica napus HOM05D009656 ORTHO05D011940 9.1e-46 187.6 145 72.4
CARHR146250 Cardamine hirsuta HOM05D009656 ORTHO05D011940 4.5e-45 185.3 145 71.0
A02p33560 Brassica napus HOM05D009656 ORTHO05D011940 3.8e-44 182.2 145 71.0
BraA02t08377Z Brassica rapa HOM05D009656 ORTHO05D011940 3.8e-44 182.2 145 71.0
Thhalv10004969m.g Eutrema salsugineum HOM05D009656 ORTHO05D011940 6.1e-42 174.9 121 76.0
AL5G13530 Arabidopsis lyrata HOM05D009656 ORTHO05D011940 1.0e-41 174.1 128 72.7
AT2G03740 Arabidopsis thaliana HOM05D009656 ORTHO05D011940 2.0e-40 169.9 123 74.0
CARHR146130 Cardamine hirsuta HOM05D009656 ORTHO05D011940 1.7e-39 166.8 144 63.2
AL5G13670 Arabidopsis lyrata HOM05D009656 ORTHO05D011940 2.0e-37 159.8 130 70.0
Carub.0005s0301 Capsella rubella HOM05D009656 ORTHO05D011940 6.5e-36 154.8 144 64.6
AT2G03850 Arabidopsis thaliana HOM05D009656 ORTHO05D011940 3.2e-35 152.5 132 65.2
Sp2g14570 Schrenkiella parvula HOM05D009656 ORTHO05D011940 5.5e-35 151.8 134 63.4
Thhalv10004937m.g Eutrema salsugineum HOM05D009656 ORTHO05D011940 1.2e-34 150.6 112 70.5
Carub.0005s0288 Capsella rubella HOM05D009656 ORTHO05D011940 3.6e-34 149.1 124 67.7
C07p34100 Brassica napus HOM05D009656 ORTHO05D011940 1.8e-33 146.7 119 68.1
BolC7t43924H Brassica oleracea HOM05D009656 ORTHO05D011940 1.8e-33 146.7 119 68.1
A06p42920 Brassica napus HOM05D009656 ORTHO05D011940 4.1e-30 135.6 143 56.6
BcaC06g31167 Brassica carinata HOM05D009656 ORTHO05D011940 7.7e-29 131.3 119 63.0
BcaC06g31156 Brassica carinata HOM05D009656 ORTHO05D011940 5.2e-17 92.0 63 69.8
Aa31LG1G24350 Aethionema arabicum HOM05D009656 ORTHO05D011940 3.3e-11 72.8 95 46.3
AT2G42530 Arabidopsis thaliana HOM05D010227 ORTHO05D012306 3.6e-10 69.3 157 36.9
AL4G41070 Arabidopsis lyrata HOM05D010227 ORTHO05D012306 3.1e-09 66.2 155 38.7
Sp4g24660 Schrenkiella parvula HOM05D010227 ORTHO05D012306 3.1e-09 66.2 153 35.9
Thhalv10017393m.g Eutrema salsugineum HOM05D010227 ORTHO05D012306 3.4e-08 62.8 153 35.3
CARHR016340 Cardamine hirsuta HOM05D009656 ORTHO05D017552 2.9e-07 59.7 75 54.7
C03p28240 Brassica napus HOM05D010227 ORTHO05D012306 3.7e-07 59.3 136 36.8
A03p23680 Brassica napus HOM05D010227 ORTHO05D012306 8.3e-07 58.2 136 33.8
Carub.0004s2499 Capsella rubella HOM05D010227 ORTHO05D012306 1.1e-06 57.8 155 36.1
Sp1g14130 Schrenkiella parvula HOM05D000133 ORTHO05D005407 1.9e-06 57.0 75 53.3
BcaB01g03455 Brassica carinata HOM05D010227 ORTHO05D012306 2.4e-06 56.6 131 33.6
AL1G27970 Arabidopsis lyrata HOM05D000133 ORTHO05D005407 3.2e-06 56.2 75 50.7
AT1G15820 Arabidopsis thaliana HOM05D000133 ORTHO05D005407 4.1e-06 55.8 75 52.0
C05p14070 Brassica napus HOM05D000133 ORTHO05D005407 4.1e-06 55.8 75 52.0
BolC5t30138H Brassica oleracea HOM05D000133 ORTHO05D005407 4.1e-06 55.8 75 52.0
BraA03t11585Z Brassica rapa HOM05D010227 ORTHO05D012306 5.4e-06 55.5 139 31.7
Thhalv10008533m.g Eutrema salsugineum HOM05D000133 ORTHO05D005407 5.4e-06 55.5 75 52.0
Carub.0001s1561 Capsella rubella HOM05D000133 ORTHO05D005407 9.2e-06 54.7 75 50.7
Carub.0004s2498 Capsella rubella HOM05D010227 ORTHO05D012306 9.2e-06 54.7 145 33.8


User provided reference genes

Program Settings