Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp2g07720 Schrenkiella parvula HOM05D005164 ORTHO05D006398 1.0e-216 756.5 398 100.0
A02p27610 Brassica napus HOM05D005164 ORTHO05D006398 3.2e-210 734.9 398 97.0
BolC2t10406H Brassica oleracea HOM05D005164 ORTHO05D006398 3.2e-210 734.9 398 97.0
BraA02t07794Z Brassica rapa HOM05D005164 ORTHO05D006398 3.2e-210 734.9 398 97.0
BcaC03g16546 Brassica carinata HOM05D005164 ORTHO05D006398 1.0e-208 729.9 398 96.5
A06p48120 Brassica napus HOM05D005164 ORTHO05D006398 1.0e-208 729.9 398 96.5
C02p43640 Brassica napus HOM05D005164 ORTHO05D006398 1.0e-208 729.9 398 96.5
BraA06t27681Z Brassica rapa HOM05D005164 ORTHO05D006398 1.0e-208 729.9 398 96.5
BcaC06g31734 Brassica carinata HOM05D005164 ORTHO05D006398 1.7e-208 729.2 398 96.2
BcaB07g30597 Brassica carinata HOM05D005164 ORTHO05D006398 3.9e-208 728.0 398 96.2
Carub.0008s0578 Capsella rubella HOM05D005164 ORTHO05D006398 1.1e-207 726.5 398 95.5
CARHR181050 Cardamine hirsuta HOM05D005164 ORTHO05D006398 2.5e-207 725.3 398 95.5
AT5G42970 Arabidopsis thaliana HOM05D005164 ORTHO05D006398 3.3e-207 724.9 398 95.2
BcaC02g10785 Brassica carinata HOM05D005164 ORTHO05D006398 7.3e-207 723.8 398 96.0
C04p25110 Brassica napus HOM05D005164 ORTHO05D006398 7.3e-207 723.8 398 96.0
BolC4t24015H Brassica oleracea HOM05D005164 ORTHO05D006398 7.3e-207 723.8 398 96.0
AL8G17800 Arabidopsis lyrata HOM05D005164 ORTHO05D006398 1.1e-205 719.9 398 94.5
Thhalv10003436m.g Eutrema salsugineum HOM05D005164 ORTHO05D006398 2.3e-205 718.8 398 95.0
Aa31LG9G13090 Aethionema arabicum HOM05D005164 ORTHO05D006398 2.7e-201 705.3 398 94.0
THA.LOC104814156 Tarenaya hassleriana HOM05D005164 ORTHO05D006398 3.0e-200 701.8 399 92.7
THA.LOC104822841 Tarenaya hassleriana HOM05D005164 ORTHO05D006398 1.1e-197 693.3 398 91.0
MSTRG.24294 Avicennia marina HOM05D005164 ORTHO05D006398 2.1e-190 669.1 398 86.9
Ciclev10001386m.g Citrus clementina HOM05D005164 ORTHO05D006398 1.1e-189 666.8 398 87.2
Manes.18G028500 Manihot esculenta HOM05D005164 ORTHO05D006398 1.5e-188 662.9 398 85.9
EL10Ac8g20456 Beta vulgaris HOM05D005164 ORTHO05D006398 2.6e-188 662.1 398 86.4
Sc02g0006310 Simmondsia chinensis HOM05D005164 ORTHO05D006398 9.9e-188 660.2 398 85.7
TWI56G0324 Tripterygium wilfordii HOM05D005164 ORTHO05D006398 2.9e-187 658.7 398 86.4
COL.COLO4_26343 Corchorus olitorius HOM05D005164 ORTHO05D006398 3.8e-187 658.3 398 86.2
CiPaw.16G055400 Carya illinoinensis HOM05D005164 ORTHO05D006398 8.4e-187 657.1 398 85.4
Cfa018135 Carpinus fangiana HOM05D005164 ORTHO05D006398 1.9e-186 656.0 398 85.2
Gohir.A03G078200 Gossypium hirsutum HOM05D005164 ORTHO05D006398 4.2e-186 654.8 398 85.7
GSVIVG01009684001 Vitis vinifera HOM05D005164 ORTHO05D006398 4.2e-186 654.8 398 85.9
AUR62014895 Chenopodium quinoa HOM05D005164 ORTHO05D006398 5.4e-186 654.4 398 85.9
Lj4C784T1 Lonicera japonica HOM05D005164 ORTHO05D006398 5.4e-186 654.4 398 85.4
Thecc.08G024200 Theobroma cacao HOM05D005164 ORTHO05D006398 5.4e-186 654.4 398 85.9
HanXRQChr02g0040181 Helianthus annuus HOM05D005164 ORTHO05D006398 9.3e-186 653.7 398 84.7
QL02p007897 Quercus lobata HOM05D005164 ORTHO05D006398 9.3e-186 653.7 397 84.9
Ca_25003_v3 Cicer arietinum L. HOM05D005164 ORTHO05D006398 1.2e-185 653.3 398 84.9
Eucgr.F01909 Eucalyptus grandis HOM05D005164 ORTHO05D006398 1.2e-185 653.3 398 85.4
Gohir.D02G094300 Gossypium hirsutum HOM05D005164 ORTHO05D006398 1.2e-185 653.3 398 85.4
Gorai.005G107200 Gossypium raimondii HOM05D005164 ORTHO05D006398 1.2e-185 653.3 398 85.4
Gohir.A05G260000 Gossypium hirsutum HOM05D005164 ORTHO05D006398 2.1e-185 652.5 398 85.2
Lsat_1_v5_gn_1_17561 Lactuca sativa HOM05D005164 ORTHO05D006398 2.7e-185 652.1 398 85.2
Potri.002G263200 Populus trichocarpa HOM05D005164 ORTHO05D006398 2.7e-185 652.1 398 84.9
Nn5g29540 Nelumbo nucifera HOM05D005164 ORTHO05D006398 3.5e-185 651.7 398 85.4
TAR376G0296 Trochodendron aralioides HOM05D005164 ORTHO05D006398 3.5e-185 651.7 398 84.9
RcHm_v2.0_Chr6g0300751 Rosa chinensis HOM05D005164 ORTHO05D006398 4.6e-185 651.4 398 84.7
SalBow8G2733 Salvia bowleyana HOM05D005164 ORTHO05D006398 6.0e-185 651.0 398 83.9
CiPaw.15G075600 Carya illinoinensis HOM05D005164 ORTHO05D006398 1.3e-184 649.8 398 84.9
Dinv36062 Davidia involucrata HOM05D005164 ORTHO05D006398 1.7e-184 649.4 398 84.7
ECA247G1488 Erigeron canadensis HOM05D005164 ORTHO05D006398 1.7e-184 649.4 398 84.9
Glyma.09G231100 Glycine max HOM05D005164 ORTHO05D006398 1.7e-184 649.4 398 84.4
Psat3g167280 Pisum sativum HOM05D005164 ORTHO05D006398 1.7e-184 649.4 398 84.7
CANSAT64G0480 Cannabis sativa HOM05D005164 ORTHO05D006398 3.0e-184 648.7 398 84.2
Cc10_g03080 Coffea canephora HOM05D005164 ORTHO05D006398 3.9e-184 648.3 398 84.4
Duzib041G0411 Durio zibethinus HOM05D005164 ORTHO05D006398 3.9e-184 648.3 398 84.9
Lj3g0003260 Lotus japonicus HOM05D005164 ORTHO05D006398 6.6e-184 647.5 398 84.4
Gohir.D05G261900 Gossypium hirsutum HOM05D005164 ORTHO05D006398 1.1e-183 646.7 398 84.7
Os03g0197400 Oryza sativa ssp. japonica HOM05D005164 ORTHO05D006398 1.1e-183 646.7 400 84.0
Potri.014G180800 Populus trichocarpa HOM05D005164 ORTHO05D006398 1.1e-183 646.7 398 84.7
Glyma.12G005400 Glycine max HOM05D005164 ORTHO05D006398 1.5e-183 646.4 398 84.2
Solyc04g080160.3 Solanum lycopersicum HOM05D005164 ORTHO05D006398 1.5e-183 646.4 398 83.9
Sopen04g033750 Solanum pennellii HOM05D005164 ORTHO05D006398 1.5e-183 646.4 398 83.9
Peaxi162Scf00690g00117 Petunia axillaris HOM05D005164 ORTHO05D006398 1.9e-183 646.0 398 84.7
ATR0733G076 Amborella trichopoda HOM05D005164 ORTHO05D006398 2.5e-183 645.6 398 84.2
Medtr0173s0030 Medicago truncatula HOM05D005164 ORTHO05D006398 3.3e-183 645.2 398 83.9
DCAR_019523 Daucus carota HOM05D005164 ORTHO05D006398 4.3e-183 644.8 398 83.9
Sed0001534 Sechium edule HOM05D005164 ORTHO05D006398 4.3e-183 644.8 399 84.5
PGSC0003DMG400005163 Solanum tuberosum HOM05D005164 ORTHO05D006398 4.3e-183 644.8 398 83.7
Phvul.011G006200 Phaseolus vulgaris HOM05D005164 ORTHO05D006398 5.6e-183 644.4 398 83.9
VMungo1127G0366 Vigna mungo HOM05D005164 ORTHO05D006398 7.3e-183 644.0 398 83.9
MELO3C003848.2 Cucumis melo HOM05D005164 ORTHO05D006398 9.6e-183 643.7 398 84.4
CsaV3_3G045000 Cucumis sativus L. HOM05D005164 ORTHO05D006398 9.6e-183 643.7 398 84.4
Hund21200 Selenicereus undatus HOM05D005164 ORTHO05D006398 9.6e-183 643.7 398 84.7
Gorai.009G273800 Gossypium raimondii HOM05D005164 ORTHO05D006398 2.8e-182 642.1 401 84.0
Sed0021376 Sechium edule HOM05D005164 ORTHO05D006398 6.2e-182 641.0 398 83.9
Migut.N00498 Erythranthe guttata HOM05D005164 ORTHO05D006398 1.1e-181 640.2 398 83.4
CANSAT25G0119 Cannabis sativa HOM05D005164 ORTHO05D006398 2.4e-181 639.0 403 82.4
FvH4_2g40000 Fragaria vesca HOM05D005164 ORTHO05D006398 2.4e-181 639.0 399 83.5
FAN27G0257 Fragaria x ananassa HOM05D005164 ORTHO05D006398 2.4e-181 639.0 399 83.5
FAN15G2586 Fragaria x ananassa HOM05D005164 ORTHO05D006398 6.9e-181 637.5 399 83.2
PGR031G3751 Punica granatum HOM05D005164 ORTHO05D006398 4.5e-180 634.8 398 83.7
Aqoxy6G01049 Aquilegia oxysepala HOM05D005164 ORTHO05D006398 9.9e-180 633.6 398 82.4
FAN20G1227 Fragaria x ananassa HOM05D005164 ORTHO05D006398 1.3e-179 633.3 399 83.0
Gorai.002G128900 Gossypium raimondii HOM05D005164 ORTHO05D006398 1.3e-179 633.3 398 82.2
Gohir.D01G104900 Gossypium hirsutum HOM05D005164 ORTHO05D006398 2.2e-179 632.5 398 82.4
CAN.G1126.40 Capsicum annuum HOM05D005164 ORTHO05D006398 3.8e-179 631.7 398 81.9
Gohir.A01G116500 Gossypium hirsutum HOM05D005164 ORTHO05D006398 1.9e-178 629.4 398 82.4
MD08G1033300 Malus domestica HOM05D005164 ORTHO05D006398 5.4e-178 627.9 398 81.7
AUR62031100 Chenopodium quinoa HOM05D005164 ORTHO05D006398 2.7e-177 625.5 398 83.2
Zm00001eb008060 Zea mays HOM05D005164 ORTHO05D006398 3.5e-177 625.2 440 75.9
Oeu009868.2 Olea europaea HOM05D005164 ORTHO05D006398 4.6e-177 624.8 477 72.1
CDE02G4403 Ceratophyllum demersum HOM05D005164 ORTHO05D006398 7.9e-177 624.0 398 81.4
unitig_22.g6774 Utricularia gibba HOM05D005164 ORTHO05D006398 1.5e-175 619.8 392 82.4
MD15G1029900 Malus domestica HOM05D005164 ORTHO05D006398 2.5e-175 619.0 406 79.6
CDE01G0241 Ceratophyllum demersum HOM05D005164 ORTHO05D006398 1.2e-172 610.1 402 79.6
Haze_17990 Corylus avellana HOM05D005164 ORTHO05D006398 2.6e-172 609.0 501 67.9
Hma1.2p1_0023F.1_g014900 Hydrangea macrophylla HOM05D005164 ORTHO05D006398 9.9e-172 607.1 490 69.0
ClCG05G019140 Citrullus lanatus HOM05D005164 ORTHO05D006398 1.3e-171 606.7 398 81.2
Nitab4.5_0000110g0500 Nicotiana tabacum HOM05D005164 ORTHO05D006398 3.2e-170 602.1 398 79.9
Prupe.1G381600 Prunus persica HOM05D005164 ORTHO05D006398 9.3e-170 600.5 398 79.9
PSO541G6137 Papaver somniferum HOM05D005164 ORTHO05D006398 2.1e-169 599.4 398 78.9
PSO675G3600 Papaver somniferum HOM05D005164 ORTHO05D006398 6.0e-169 597.8 398 78.6
SGA_v2.0_scaffold326G48708 Striga asiatica HOM05D005164 ORTHO05D006398 1.3e-168 596.7 355 85.9
Nitab4.5_0010187g0010 Nicotiana tabacum HOM05D005164 ORTHO05D006398 5.1e-168 594.7 398 79.6
Mapoly0072s0034 Marchantia polymorpha HOM05D005164 ORTHO05D006398 3.7e-166 588.6 398 73.9
Hma1.2p1_0469F.1_g159190 Hydrangea macrophylla HOM05D005164 ORTHO05D006398 1.4e-165 586.6 439 73.6
Sabra14G0141000 Salix brachista HOM05D005164 ORTHO05D006398 6.9e-165 584.3 437 73.7
Rhsim06G0035000 Rhododendron simsii HOM05D005164 ORTHO05D006398 9.0e-165 583.9 418 75.6
Atru.chr13.515 Acer truncatum HOM05D005164 ORTHO05D006398 4.5e-164 581.6 353 85.8
MBI17_g39721_MAGBIO Magnolia biondii HOM05D005164 ORTHO05D006398 3.8e-163 578.6 431 74.2
Actinidia22558 Actinidia chinensis HOM05D005164 ORTHO05D006398 1.1e-162 577.0 377 80.6
SMO364G0673 Selaginella moellendorffii HOM05D005164 ORTHO05D006398 4.6e-161 571.6 395 72.7
Pp3c5_28450 Physcomitrium patens HOM05D005164 ORTHO05D006398 2.3e-160 569.3 395 72.7
AagrBONN_evm.TU.Sc2ySwM_117.2514 Anthoceros agrestis HOM05D005164 ORTHO05D006398 3.0e-160 568.9 397 71.5
Manes.05G161900 Manihot esculenta HOM05D005164 ORTHO05D006398 4.3e-159 565.1 353 83.3
TPR.G3648 Trifolium pratense HOM05D005164 ORTHO05D006398 4.5e-156 555.1 387 77.0
CBR_g36268 Chara braunii HOM05D005164 ORTHO05D006398 2.7e-145 519.2 395 66.6
vmacro21627 Vaccinium macrocarpon HOM05D005164 ORTHO05D006398 2.3e-144 516.2 398 70.9
Duzib093G0265 Durio zibethinus HOM05D005164 ORTHO05D006398 2.2e-139 499.6 398 69.1
HPP92_024905 Vanilla planifolia HOM05D005164 ORTHO05D006398 5.9e-132 474.9 347 71.8
Actinidia15313 Actinidia chinensis HOM05D005164 ORTHO05D006398 1.6e-129 466.8 419 62.5
CSS0020238 Camellia sinensis var. sinensis HOM05D005164 ORTHO05D006398 7.0e-125 451.4 271 85.6
CAN.G416.53 Capsicum annuum HOM05D005164 ORTHO05D006398 6.3e-118 428.3 312 73.4
Cre11.g478240 Chlamydomonas reinhardtii HOM05D005164 ORTHO05D006398 8.9e-112 407.9 393 54.2
RcHm_v2.0_Chr2g0166611 Rosa chinensis HOM05D005164 ORTHO05D006398 6.1e-105 385.2 229 86.9
MCO16G668 Micromonas commoda HOM05D005164 ORTHO05D006398 2.0e-103 380.2 402 50.7
Cpa.g.sc64.68 Carica papaya HOM05D005164 ORTHO05D006398 1.7e-94 350.5 216 83.8
PRCOL_00006114 Prasinoderma coloniale HOM05D005164 ORTHO05D006398 7.3e-90 335.1 404 47.5
SEGI_27147 Sequoiadendron giganteum HOM05D005164 ORTHO05D006398 4.7e-81 305.8 213 73.7
Sopen04g033730 Solanum pennellii HOM05D005164 ORTHO05D006398 9.3e-77 291.6 214 72.0
GSVIVG01023193001 Vitis vinifera HOM05D005164 ORTHO05D006398 6.4e-62 242.3 150 83.3
GSVIVG01003780001 Vitis vinifera HOM05D005164 ORTHO05D006398 2.1e-60 237.3 150 81.3
Carub.0004s0266 Capsella rubella HOM05D005164 ORTHO05D006398 1.0e-59 235.0 146 87.0
Cfa024373 Carpinus fangiana HOM05D005164 ORTHO05D006398 8.1e-57 225.3 358 38.0
MBI17_g35116_MAGBIO Magnolia biondii HOM05D005164 ORTHO05D006398 3.9e-51 206.5 183 66.1
Haze_26904 Corylus avellana HOM05D005164 ORTHO05D006398 4.5e-39 166.4 203 45.3
arahy.Tifrunner.gnm1.ann1.ABX6XB Arachis hypogaea HOM05D005164 ORTHO05D006398 6.1e-36 156.0 243 45.7
arahy.Tifrunner.gnm1.ann1.D3INNH Arachis hypogaea HOM05D005164 ORTHO05D006398 6.3e-33 146.0 94 80.9
arahy.Tifrunner.gnm1.ann1.R33BY8 Arachis hypogaea HOM05D005164 ORTHO05D006398 6.3e-33 146.0 94 80.9
TPR.G136 Trifolium pratense HOM05D005164 ORTHO05D006398 6.5e-14 82.8 49 75.5
arahy.Tifrunner.gnm1.ann1.ZV61IE Arachis hypogaea HOM05D005164 ORTHO05D006398 1.0e-11 75.5 66 63.6
ECA240G1489 Erigeron canadensis HOM05D001185 ORTHO05D003777 9.1e-08 62.4 330 23.3
arahy.Tifrunner.gnm1.ann1.2K5AT5 Arachis hypogaea HOM05D005164 ORTHO05D006398 1.6e-07 61.6 42 71.4
CsaV3_2G017820 Cucumis sativus L. HOM05D001185 ORTHO05D003777 1.7e-06 58.2 337 22.0


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