Gene: Sopen04g033750

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen04g033750
  • Transcript Identifier Sopen04g033750.1
  • Gene Type Coding gene
  • Location Spenn-ch04 : 75009959-75018153 : positive

Gene Family Information

  • ID HOM05D005164
  • #Genes/#Species 146/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen04g033750.1

Descriptions

  • Description encodes subunit 4 of COP9 signalosome complex. sequence is similar to a subunit of the 19S regulatory particle of the 26S proteasome. recessive mutation causes derepression of photomorphogenesis. | CONSTITUTIVE PHOTOMORPHOGENIC 8 (COP8) | FUNCTIONS IN: protein binding | INVOLVED IN: cullin deneddylation, negative regulation of photomorphogenesis, G2 phase of mitotic cell cycle, photomorphogenesis | LOCATED IN: signalosome | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding , Proteasome component (PCI) domain | BEST Arabidopsis thaliana protein match is: regulatory particle non-ATPase subunit 5B
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009640
ISO
PLAZA Integrative Orthologyphotomorphogenesis AT5G42970
GO:0000338
ISO
PLAZA Integrative Orthologyprotein deneddylation AT5G42970
GO:0010971
ISO
PLAZA Integrative Orthologypositive regulation of G2/M transition of mitotic cell cycle AT5G42970

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G42970

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT5G42970
GO:0032991
ISO
PLAZA Integrative Orthologyprotein-containing complex AT5G42970
GO:0008180
ISO
PLAZA Integrative OrthologyCOP9 signalosome AT5G42970

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036390 Winged helix DNA-binding domain superfamily
IPR036388 Winged helix-like DNA-binding domain superfamily
IPR040134 26S Proteasome non-ATPase regulatory subunit 12/COP9 signalosome complex subunit 4
IPR000717 Proteasome component (PCI) domain
Mapman id Description
19.2.3.3.1.4 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein deconjugation.RUB deconjugation.COP9 signalosome complex.component CSN4