Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG9G13090 LG-9 - View
Actinidia chinensis Actinidia22558 Lachesis_group28 - View
Arabidopsis lyrata AL8G17800 scaffold_8 + View
Arabidopsis thaliana AT5G42970 Proteasome component (PCI) domain protein encodes subunit 4 of COP9 signalosome complex. sequence is similar to a subunit of the 19S regulatory particle of the 26S proteasome. recessive mutation causes derepression of photomorphogenesis. CONSTITUTIVE PHOTOMORPHOGENIC 8 (COP8)%3B FUNCTIONS IN: protein binding%3B INVOLVED IN: cullin deneddylation%2C negative regulation of photomorphogenesis%2C G2 phase of mitotic cell cycle%2C photomorphogenesis%3B LOCATED IN: signalosome%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991)%2C Proteasome component (PCI) domain (InterPro:IPR000717)%3B BEST Arabidopsis thaliana protein match is: regulatory particle non-ATPase subunit 5B (TAIR:AT5G64760.2)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink). Chr5 - View
Brassica carinata BcaC03g16546 ChrC03 - View
Brassica carinata BcaC02g10785 ChrC02 + View
Brassica carinata BcaB07g30597 ChrB07 + View
Brassica carinata BcaC06g31734 ChrC06 + View
Brassica napus A02p27610 A02 - View
Brassica napus A06p48120 A06 + View
Brassica napus C02p43640 C02 - View
Brassica napus C04p25110 C04 - View
Brassica oleracea BolC2t10406H C2 - View
Brassica oleracea BolC4t24015H C4 - View
Brassica rapa BraA02t07794Z A02 - View
Brassica rapa BraA06t27681Z A06 + View
Camellia sinensis var. sinensis CSS0020238 hypothetical protein JCGZ_04406 [Jatropha curcas] Chr4 - View
Cannabis sativa CANSAT25G0119 NC_044370.1 + View
Corylus avellana Haze_17990 Similar to CSN4: COP9 signalosome complex subunit 4 (Arabidopsis thaliana OX%3D3702) 7 - View
Cardamine hirsuta CARHR181050 COP9 signalosome complex subunit 4 Chr6 + View
Capsella rubella Carub.0008s0578 K12178 - COP9 signalosome complex subunit 4 (COPS4, CSN4) scaffold_8 + View
Durio zibethinus Duzib093G0265 NW_019167937.1 + View
Durio zibethinus Duzib041G0411 NW_019167826.1 - View
Eucalyptus grandis Eucgr.F01909 Chr06 - View
Eutrema salsugineum Thhalv10003436m.g K12178 - COP9 signalosome complex subunit 4 (COPS4, CSN4) scaffold_17 + View
Lonicera japonica Lj4C784T1 GWHAAZE00000004 + View
Prunus persica Prupe.1G381600 Pp01 - View
Quercus lobata QL02p007897 CM012294 + View
Theobroma cacao Thecc.08G024200 Proteasome component (PCI) domain protein Chromosome_8 + View
Tarenaya hassleriana THA.LOC104814156 COP9 signalosome complex subunit 4 isoform X1 NW_010965451.1 + View
Tarenaya hassleriana THA.LOC104822841 COP9 signalosome complex subunit 4-like NW_010966774.1 + View
Vitis vinifera GSVIVG01009684001 chr18 + View