Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp1g05880 Schrenkiella parvula HOM05D007082 ORTHO05D008895 4.8e-85 317.8 159 100.0
AL1G17250 Arabidopsis lyrata HOM05D007082 ORTHO05D008895 1.2e-70 270.0 159 84.9
Carub.0001s0641 Capsella rubella HOM05D007082 ORTHO05D008895 4.4e-70 268.1 159 82.4
BolC8t47089H Brassica oleracea HOM05D007082 ORTHO05D008895 1.8e-68 262.7 159 82.4
CARHR006820 Cardamine hirsuta HOM05D007082 ORTHO05D008895 1.8e-68 262.7 159 82.4
Thhalv10008979m.g Eutrema salsugineum HOM05D007082 ORTHO05D008895 1.8e-68 262.7 159 83.0
AT1G07130 Arabidopsis thaliana HOM05D007082 ORTHO05D008895 2.4e-68 262.3 157 81.5
C08p02920 Brassica napus HOM05D007082 ORTHO05D008895 7.0e-68 260.8 159 81.8
BolC8t47080H Brassica oleracea HOM05D007082 ORTHO05D008895 1.2e-67 260.0 159 80.5
A08p35770 Brassica napus HOM05D007082 ORTHO05D008895 1.6e-67 259.6 159 81.1
BraA08t35483Z Brassica rapa HOM05D007082 ORTHO05D008895 1.6e-67 259.6 159 81.1
C08p02850 Brassica napus HOM05D007082 ORTHO05D008895 1.6e-64 249.6 173 74.0
BcaB03g13405 Brassica carinata HOM05D007082 ORTHO05D008895 1.4e-60 236.5 159 74.8
THA.LOC104800748 Tarenaya hassleriana HOM05D007082 ORTHO05D008895 1.4e-55 219.9 156 68.6
Aa31LG5G6620 Aethionema arabicum HOM05D007082 ORTHO05D008895 2.3e-55 219.2 158 67.7
CANSAT25G2376 Cannabis sativa HOM05D007082 ORTHO05D008895 1.7e-42 176.4 155 56.8
Prupe.8G236800 Prunus persica HOM05D004770 ORTHO05D005572 3.0e-42 175.6 162 56.8
TWI12G0539 Tripterygium wilfordii HOM05D007082 ORTHO05D008895 3.0e-42 175.6 161 58.4
MD03G1260600 Malus domestica HOM05D007082 ORTHO05D008895 3.9e-42 175.3 160 55.6
Cc01_g19180 Coffea canephora HOM05D007082 ORTHO05D008895 6.6e-42 174.5 152 55.3
MSTRG.18253 Avicennia marina HOM05D007082 ORTHO05D008895 8.6e-42 174.1 152 54.6
CiPaw.07G089100 Carya illinoinensis HOM05D007082 ORTHO05D008895 1.1e-41 173.7 157 58.0
Ciclev10022619m.g Citrus clementina HOM05D007082 ORTHO05D008895 4.3e-41 171.8 157 57.3
Haze_04674 Corylus avellana HOM05D007082 ORTHO05D008895 5.6e-41 171.4 157 56.7
Potri.005G212900 Populus trichocarpa HOM05D007082 ORTHO05D008895 5.6e-41 171.4 160 53.1
Cfa004492 Carpinus fangiana HOM05D007082 ORTHO05D008895 9.5e-41 170.6 157 56.7
RcHm_v2.0_Chr6g0290411 Rosa chinensis HOM05D007082 ORTHO05D008895 9.5e-41 170.6 156 56.4
Rhsim13G0027400 Rhododendron simsii HOM05D007082 ORTHO05D008895 1.2e-40 170.2 154 51.9
Oeu025749.1 Olea europaea HOM05D007082 ORTHO05D008895 2.8e-40 169.1 152 53.9
SGA_v2.0_scaffold12G06137 Striga asiatica HOM05D003153 ORTHO05D008895 3.6e-40 168.7 155 54.2
SGA_v2.0_scaffold1G00512 Striga asiatica HOM05D007082 ORTHO05D008895 4.7e-40 168.3 156 54.5
FAN20G2212 Fragaria x ananassa HOM05D007082 ORTHO05D008895 1.8e-39 166.4 155 53.5
HanXRQChr05g0154391 Helianthus annuus HOM05D007082 ORTHO05D008895 2.3e-39 166.0 153 55.6
Haze_10047 Corylus avellana HOM05D007082 ORTHO05D008895 4.0e-39 165.2 157 54.1
CSS0021912 Camellia sinensis var. sinensis HOM05D007082 ORTHO05D008895 5.2e-39 164.9 155 52.3
CSS0029740 Camellia sinensis var. sinensis HOM05D007082 ORTHO05D008895 5.2e-39 164.9 155 52.3
FvH4_2g23151 Fragaria vesca HOM05D007082 ORTHO05D008895 5.2e-39 164.9 155 53.5
Eucgr.H01442 Eucalyptus grandis HOM05D007082 ORTHO05D008895 6.8e-39 164.5 155 53.5
Lj2P1167T48 Lonicera japonica HOM05D007082 ORTHO05D008895 6.8e-39 164.5 153 52.9
TAR622G1184 Trochodendron aralioides HOM05D007082 ORTHO05D008895 6.8e-39 164.5 152 52.6
Atru.chr5.1487 Acer truncatum HOM05D000296 ORTHO05D000175 8.9e-39 164.1 158 53.2
QL12p020738 Quercus lobata HOM05D007082 ORTHO05D008895 1.2e-38 163.7 158 53.8
DCAR_002714 Daucus carota HOM05D007082 ORTHO05D008895 1.5e-38 163.3 158 51.3
Migut.D00329 Erythranthe guttata HOM05D007082 ORTHO05D008895 2.0e-38 162.9 155 51.6
Duzib128G1180 Durio zibethinus HOM05D007082 ORTHO05D008895 3.4e-38 162.2 152 53.3
Dinv32900 Davidia involucrata HOM05D007082 ORTHO05D008895 4.4e-38 161.8 150 54.0
Eucgr.H01429 Eucalyptus grandis HOM05D007082 ORTHO05D008895 4.4e-38 161.8 155 52.3
COL.COLO4_14680 Corchorus olitorius HOM05D007082 ORTHO05D008895 5.8e-38 161.4 152 54.6
SalBow4G2456 Salvia bowleyana HOM05D007082 ORTHO05D008895 5.8e-38 161.4 151 53.0
Haze_10052 Corylus avellana HOM05D007082 ORTHO05D008895 7.5e-38 161.0 157 52.2
Sabra05G0162600 Salix brachista HOM05D004770 ORTHO05D005572 7.5e-38 161.0 152 52.6
Nitab4.5_0016351g0010 Nicotiana tabacum HOM05D007082 ORTHO05D008895 9.8e-38 160.6 151 53.0
Lsat_1_v5_gn_9_86820 Lactuca sativa HOM05D007082 ORTHO05D008895 1.7e-37 159.8 153 52.9
Thecc.05G027700 Theobroma cacao HOM05D007082 ORTHO05D008895 1.7e-37 159.8 153 52.9
vmacro14749 Vaccinium macrocarpon HOM05D007082 ORTHO05D008895 1.7e-37 159.8 148 53.4
Hund09516 Selenicereus undatus HOM05D007082 ORTHO05D008895 2.2e-37 159.5 157 52.9
Eucgr.H01435 Eucalyptus grandis HOM05D007082 ORTHO05D008895 4.9e-37 158.3 155 51.6
CAN.G410.16 Capsicum annuum HOM05D007082 ORTHO05D008895 1.1e-36 157.1 152 50.7
Eucgr.H01418 Eucalyptus grandis HOM05D007082 ORTHO05D008895 1.4e-36 156.8 152 51.3
Lsat_1_v5_gn_9_6120 Lactuca sativa HOM05D007082 ORTHO05D008895 1.9e-36 156.4 154 50.6
Sopen01g035010 Solanum pennellii HOM05D007082 ORTHO05D008895 3.2e-36 155.6 151 50.3
PSO832G2607 Papaver somniferum HOM05D007082 ORTHO05D008895 5.4e-36 154.8 159 49.1
PSO210G1980 Papaver somniferum HOM05D007082 ORTHO05D008895 7.1e-36 154.5 159 49.7
Psat6g025560 Pisum sativum HOM05D007082 ORTHO05D008895 7.1e-36 154.5 155 51.6
PGR119G0159 Punica granatum HOM05D007082 ORTHO05D008895 1.2e-35 153.7 156 53.2
MBI19_g34822_MAGBIO Magnolia biondii HOM05D007082 ORTHO05D008895 2.1e-35 152.9 147 50.3
Manes.01G205300 Manihot esculenta HOM05D007082 ORTHO05D008895 2.1e-35 152.9 160 51.2
Lj2g0002316 Lotus japonicus HOM05D007082 ORTHO05D008895 2.7e-35 152.5 157 47.8
Medtr1g033230 Medicago truncatula HOM05D007082 ORTHO05D008895 4.6e-35 151.8 155 50.3
Cpa.g.sc41.65 Carica papaya HOM05D007082 ORTHO05D008895 7.8e-35 151.0 149 53.7
Medtr5g020430 Medicago truncatula HOM05D007082 ORTHO05D008895 1.0e-34 150.6 155 49.7
arahy.Tifrunner.gnm1.ann1.4F6QX0 Arachis hypogaea HOM05D007082 ORTHO05D008895 2.3e-34 149.4 163 47.9
Sed0015110 Sechium edule HOM05D007082 ORTHO05D008895 3.0e-34 149.1 160 52.5
Lalb_Chr10g0095561 Lupinus albus HOM05D007082 ORTHO05D008895 5.1e-34 148.3 154 50.0
MELO3C014298.2 Cucumis melo HOM05D007082 ORTHO05D008895 8.6e-34 147.5 153 53.6
TPR.G34570 Trifolium pratense HOM05D007082 ORTHO05D008895 8.6e-34 147.5 155 49.7
CDE05G2411 Ceratophyllum demersum HOM05D007082 ORTHO05D008895 1.1e-33 147.1 152 46.7
ClCG07G000420 Citrullus lanatus HOM05D007082 ORTHO05D008895 1.1e-33 147.1 156 52.6
CsaV3_2G013600 Cucumis sativus L. HOM05D007082 ORTHO05D008895 1.1e-33 147.1 153 52.9
SHI10976 Sapria himalayana HOM05D007082 ORTHO05D008895 1.5e-33 146.7 150 52.0
arahy.Tifrunner.gnm1.ann1.CZ80LA Arachis hypogaea HOM05D007082 ORTHO05D008895 1.9e-33 146.4 162 46.9
Nn5g27058 Nelumbo nucifera HOM05D007082 ORTHO05D008895 4.3e-33 145.2 151 52.3
ECA247G0055 Erigeron canadensis HOM05D007082 ORTHO05D008895 7.3e-33 144.4 118 55.9
Psat6g050280 Pisum sativum HOM05D007082 ORTHO05D008895 1.6e-32 143.3 155 49.0
Gohir.D07G082600 Gossypium hirsutum HOM05D007082 ORTHO05D008895 2.1e-32 142.9 152 47.4
Gorai.001G088200 Gossypium raimondii HOM05D007082 ORTHO05D008895 2.1e-32 142.9 152 48.0
Sc05g0001390 Simmondsia chinensis HOM05D007082 ORTHO05D008895 4.0e-31 138.7 151 49.0
Ah.11g050380 Amaranthus hybridus HOM05D007082 ORTHO05D008895 2.6e-30 136.0 157 46.5
EL10Ac5g10526 Beta vulgaris HOM05D007082 ORTHO05D008895 1.3e-29 133.7 156 46.2
Actinidia00788 Actinidia chinensis HOM05D004770 ORTHO05D005572 3.7e-29 132.1 152 46.7
Glyma.08G176000 Glycine max HOM05D007082 ORTHO05D008895 6.4e-29 131.3 157 45.9
Zm00001eb394240 Zea mays HOM05D007082 ORTHO05D008895 6.4e-29 131.3 155 45.2
HanXRQChr16g0516211 Helianthus annuus HOM05D007082 ORTHO05D008895 1.1e-28 130.6 141 48.9
SEGI_21621 Sequoiadendron giganteum HOM05D007082 ORTHO05D008895 1.4e-28 130.2 150 44.7
VMungo1215G3041 Vigna mungo HOM05D007082 ORTHO05D008895 1.9e-28 129.8 159 47.2
Os03g0366900 Oryza sativa ssp. japonica HOM05D007082 ORTHO05D008895 2.1e-27 126.3 160 41.9
unitig_0.g135 Utricularia gibba HOM05D004770 ORTHO05D005572 3.0e-26 122.5 149 43.0
Gohir.A07G077800 Gossypium hirsutum HOM05D007082 ORTHO05D008895 7.3e-25 117.9 152 42.8
Eucgr.L00806 Eucalyptus grandis HOM05D007082 ORTHO05D008895 9.6e-25 117.5 155 41.3
MD15G1065600 Malus domestica HOM05D007082 ORTHO05D008895 2.1e-24 116.3 126 48.4
ATR0580G091 Amborella trichopoda HOM05D007082 ORTHO05D008895 2.8e-24 115.9 157 42.0
AUR62011993 Chenopodium quinoa HOM05D007082 ORTHO05D008895 3.6e-24 115.5 162 41.4
AUR62032313 Chenopodium quinoa HOM05D007082 ORTHO05D008895 6.2e-24 114.8 162 41.4
Mapoly0041s0121 Marchantia polymorpha HOM05D007082 ORTHO05D008895 1.1e-23 114.0 117 42.7
Phvul.003G015400 Phaseolus vulgaris HOM05D007082 ORTHO05D008895 1.3e-21 107.1 151 44.4
SGA_v2.0_scaffold80G25747 Striga asiatica HOM05D004770 ORTHO05D005572 2.2e-21 106.3 155 41.3
Pp3c1_6180 Physcomitrium patens HOM05D007082 ORTHO05D008895 1.4e-20 103.6 149 37.6
Lj3g0026065 Lotus japonicus HOM05D007082 ORTHO05D008895 7.1e-20 101.3 104 47.1
AagrBONN_evm.TU.Sc2ySwM_117.1416 Anthoceros agrestis HOM05D007082 ORTHO05D008895 3.3e-17 92.4 151 33.8
Aqoxy5G02465 Aquilegia oxysepala HOM05D007082 ORTHO05D008895 7.3e-17 91.3 160 36.9
Medtr5g020340 Medicago truncatula HOM05D000096 ORTHO05D008895 4.4e-14 82.0 121 41.3
MCO14G264 Micromonas commoda HOM05D007082 ORTHO05D008895 3.5e-11 72.4 113 34.5
Actinidia09115 Actinidia chinensis HOM05D007082 ORTHO05D008895 1.0e-10 70.9 54 55.6
SMO307G0023 Selaginella moellendorffii HOM05D007082 ORTHO05D008895 1.1e-09 67.4 100 36.0
PRCOL_00001098 Prasinoderma coloniale HOM05D007082 ORTHO05D008895 5.8e-06 55.1 163 27.6


User provided reference genes

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