Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen11g030770 Solanum pennellii HOM05D000293 ORTHO05D000180 8.8e-49 196.8 113 100.0
Solyc11g073120.2 Solanum lycopersicum HOM05D000293 ORTHO05D000180 4.4e-40 167.9 113 90.3
PGSC0003DMG400015536 Solanum tuberosum HOM05D000293 ORTHO05D000180 5.4e-38 161.0 113 85.8
Nitab4.5_0003179g0030 Nicotiana tabacum HOM05D000293 ORTHO05D000180 4.2e-35 151.4 118 66.9
CAN.G420.8 Capsicum annuum HOM05D000293 ORTHO05D000180 1.7e-31 139.4 117 76.9
Peaxi162Scf00411g00008 Petunia axillaris HOM05D000293 ORTHO05D000180 1.8e-22 109.4 110 59.1
Nitab4.5_0000610g0290 Nicotiana tabacum HOM05D000293 ORTHO05D000180 7.8e-21 104.0 93 62.4
Nitab4.5_0000070g0110 Nicotiana tabacum HOM05D000293 ORTHO05D000180 2.6e-16 89.0 83 62.7
Nitab4.5_0008488g0010 Nicotiana tabacum HOM05D000293 ORTHO05D000180 4.9e-15 84.7 83 60.2
Solyc06g005330.3 Solanum lycopersicum HOM05D000293 ORTHO05D000180 1.4e-14 83.2 76 59.2
Sopen06g001300 Solanum pennellii HOM05D000293 ORTHO05D000180 2.4e-14 82.4 76 59.2
PGSC0003DMG402010883 Solanum tuberosum HOM05D000293 ORTHO05D000180 7.8e-13 77.4 76 59.2
Sopen06g001290 Solanum pennellii HOM05D000293 ORTHO05D000180 1.7e-12 76.3 77 54.5
Solyc06g005310.3 Solanum lycopersicum HOM05D000293 ORTHO05D000180 1.9e-11 72.8 77 53.2
CAN.G241.41 Capsicum annuum HOM05D000293 ORTHO05D000180 2.5e-11 72.4 71 62.0
Nitab4.5_0000766g0070 Nicotiana tabacum HOM05D000293 ORTHO05D000180 2.5e-11 72.4 87 49.4
Hma1.2p1_0624F.1_g191200 Hydrangea macrophylla HOM05D000293 ORTHO05D000180 3.6e-10 68.6 85 43.5
Hma1.2p1_0846F.1_g227605 Hydrangea macrophylla HOM05D000293 ORTHO05D000180 3.6e-10 68.6 85 43.5
PGSC0003DMG401010883 Solanum tuberosum HOM05D000293 ORTHO05D000180 3.6e-10 68.6 77 54.5
Nitab4.5_0003212g0030 Nicotiana tabacum HOM05D000293 ORTHO05D000180 6.2e-10 67.8 87 47.1
Lsat_1_v5_gn_5_167580 Lactuca sativa HOM05D000293 ORTHO05D000180 2.3e-09 65.9 84 39.3
MSTRG.21181 Avicennia marina HOM05D000293 ORTHO05D000180 2.0e-08 62.8 104 40.4
ECA248G3348 Erigeron canadensis HOM05D000293 ORTHO05D000180 3.4e-08 62.0 101 38.6
HanXRQChr16g0520721 Helianthus annuus HOM05D000293 ORTHO05D000180 7.5e-08 60.8 86 38.4
Dinv06136 Davidia involucrata HOM05D000293 ORTHO05D000180 9.9e-08 60.5 90 44.4
DCAR_005305 Daucus carota HOM05D000293 ORTHO05D000180 1.3e-07 60.1 82 42.7
Cpa.g.sc190.35 Carica papaya HOM05D000293 ORTHO05D000180 2.2e-07 59.3 90 38.9
Oeu041022.2 Olea europaea HOM05D000293 ORTHO05D000180 2.2e-07 59.3 124 35.5
Rhsim13G0087000 Rhododendron simsii HOM05D000293 ORTHO05D000180 2.9e-07 58.9 77 44.2
MSTRG.18593 Avicennia marina HOM05D000293 ORTHO05D000180 4.9e-07 58.2 83 45.8
Lsat_1_v5_gn_9_22041 Lactuca sativa HOM05D000293 ORTHO05D000180 4.9e-07 58.2 91 40.7
vmacro03114 Vaccinium macrocarpon HOM05D000293 ORTHO05D000180 4.9e-07 58.2 77 42.9
Dinv30677 Davidia involucrata HOM05D000293 ORTHO05D000180 8.3e-07 57.4 127 36.2
Dinv34337 Davidia involucrata HOM05D000293 ORTHO05D000180 8.3e-07 57.4 127 36.2
Duzib150G0205 Durio zibethinus HOM05D000293 ORTHO05D000180 8.3e-07 57.4 114 35.1
TWI79G0056 Tripterygium wilfordii HOM05D000293 ORTHO05D000180 1.4e-06 56.6 124 33.1
CiPaw.13G099500 Carya illinoinensis HOM05D000293 ORTHO05D000180 4.1e-06 55.1 81 38.3
Duzib170G1070 Durio zibethinus HOM05D000293 ORTHO05D000180 4.1e-06 55.1 81 38.3
Cc01_g12280 Coffea canephora HOM05D000293 ORTHO05D000180 5.4e-06 54.7 47 57.4
PGSC0003DMG400030397 Solanum tuberosum HOM05D000293 ORTHO05D000180 5.4e-06 54.7 64 45.3
HanXRQChr08g0228271 Helianthus annuus HOM05D000293 ORTHO05D000180 7.1e-06 54.3 97 38.1
Thecc.09G327800 Theobroma cacao HOM05D000293 ORTHO05D000180 7.1e-06 54.3 117 47.0
Potri.001G235500 Populus trichocarpa HOM05D000293 ORTHO05D000180 9.2e-06 53.9 79 43.0


User provided reference genes

Program Settings