Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen11g007910 Solanum pennellii HOM05D017709 ORTHO05D026164 5.9e-259 897.1 488 100.0
Sopen11g007940 Solanum pennellii HOM05D017709 ORTHO05D026164 2.0e-73 280.8 358 55.0
Sopen02g009750 Solanum pennellii HOM05D000003 ORTHO05D026164 3.2e-55 220.3 214 60.3
Sopen07g013710 Solanum pennellii HOM05D000003 ORTHO05D000004 2.6e-36 157.5 623 25.5
Sopen08g015240 Solanum pennellii HOM05D000003 ORTHO05D000004 3.3e-36 157.1 285 34.7
Sopen08g015490 Solanum pennellii HOM05D000003 ORTHO05D000022 4.1e-34 150.2 183 44.8
Sopen10g011030 Solanum pennellii HOM05D000004 ORTHO05D026164 5.3e-34 149.8 139 52.5
Solyc06g043340.1 Solanum lycopersicum HOM05D017709 ORTHO05D026164 1.9e-31 141.4 188 47.9
Sopen05g017830 Solanum pennellii HOM05D000004 ORTHO05D000022 1.6e-30 138.3 320 30.0
Sopen08g015180 Solanum pennellii HOM05D000003 ORTHO05D000004 2.0e-28 131.3 76 77.6
Sopen09g015050 Solanum pennellii HOM05D000003 ORTHO05D000004 2.6e-28 131.0 78 75.6
Sopen09g017040 Solanum pennellii HOM05D000003 ORTHO05D000004 3.7e-27 127.1 78 71.8
Sopen05g017790 Solanum pennellii HOM05D000002 ORTHO05D000001 1.4e-26 125.2 240 34.6
Sopen06g012050 Solanum pennellii HOM05D000155 ORTHO05D000022 3.1e-26 124.0 94 63.8
Sopen12g016250 Solanum pennellii HOM05D000003 ORTHO05D000004 1.6e-25 121.7 77 71.4
Sopen03g011360 Solanum pennellii HOM05D000155 ORTHO05D000022 2.0e-25 121.3 78 66.7
Sopen04g014310 Solanum pennellii HOM05D000155 ORTHO05D000022 2.0e-25 121.3 78 66.7
Sopen09g009790 Solanum pennellii HOM05D000155 ORTHO05D000022 5.9e-25 119.8 346 26.6
Sopen10g010450 Solanum pennellii HOM05D000003 ORTHO05D000004 1.3e-24 118.6 178 38.8
Sopen05g017800 Solanum pennellii HOM05D000155 ORTHO05D000022 2.2e-24 117.9 78 67.9
Sopen01g019410 Solanum pennellii HOM05D000003 ORTHO05D000006 1.1e-23 115.5 156 39.7
Sopen11g008140 Solanum pennellii HOM05D000024 ORTHO05D000022 1.5e-23 115.2 78 59.0
Sopen00g001090 Solanum pennellii HOM05D000003 ORTHO05D000004 1.9e-23 114.8 78 59.0
Sopen11g007990 Solanum pennellii HOM05D000155 ORTHO05D000022 1.2e-22 112.1 78 61.5
Sopen08g015470 Solanum pennellii HOM05D000155 ORTHO05D000022 2.1e-22 111.3 78 62.8
Sopen11g008100 Solanum pennellii HOM05D000003 ORTHO05D000004 3.6e-22 110.5 78 60.3
Sopen03g008140 Solanum pennellii HOM05D000014 ORTHO05D000016 4.7e-22 110.2 78 62.8
Sopen05g012830 Solanum pennellii HOM05D000155 ORTHO05D000022 4.7e-22 110.2 78 61.5
Sopen00g003380 Solanum pennellii HOM05D000155 ORTHO05D000022 8.0e-22 109.4 78 59.0
Sopen00g003540 Solanum pennellii HOM05D000003 ORTHO05D000004 8.0e-22 109.4 78 59.0
Sopen09g015010 Solanum pennellii HOM05D000003 ORTHO05D000022 1.4e-21 108.6 78 61.5
Sopen00g003390 Solanum pennellii HOM05D000003 ORTHO05D000004 3.0e-21 107.5 78 57.7
PGSC0003DMG400039694 Solanum tuberosum HOM05D000155 ORTHO05D000022 3.0e-21 107.5 78 59.0
Sopen01g026920 Solanum pennellii HOM05D000003 ORTHO05D000022 4.0e-21 107.1 77 63.6
Sopen01g005290 Solanum pennellii HOM05D000155 ORTHO05D000022 1.2e-20 105.5 78 60.3
Sopen11g007870 Solanum pennellii HOM05D000155 ORTHO05D000007 2.0e-20 104.8 105 46.7
Sopen09g028340 Solanum pennellii HOM05D000003 ORTHO05D000006 2.8e-19 100.9 213 31.0
Sopen11g008050 Solanum pennellii HOM05D000155 ORTHO05D000022 4.8e-19 100.1 82 57.3
PGSC0003DMG400046872 Solanum tuberosum HOM05D000003 ORTHO05D000022 1.1e-18 99.0 79 53.2
Sopen06g003730 Solanum pennellii HOM05D000155 ORTHO05D000022 1.4e-18 98.6 78 59.0
PGSC0003DMG400040069 Solanum tuberosum HOM05D000155 ORTHO05D000022 1.4e-18 98.6 103 43.7
Sopen03g011820 Solanum pennellii HOM05D000003 ORTHO05D000004 4.1e-18 97.1 105 49.5
Sopen11g015660 Solanum pennellii HOM05D000003 ORTHO05D023159 1.6e-17 95.1 72 58.3
Sopen02g008700 Solanum pennellii HOM05D000003 ORTHO05D000022 2.0e-17 94.7 69 60.9
Sopen10g010510 Solanum pennellii HOM05D008663 ORTHO05D011127 2.0e-17 94.7 103 49.5
Sopen09g015040 Solanum pennellii HOM05D008663 ORTHO05D011127 4.5e-17 93.6 107 48.6
PGSC0003DMG400010787 Solanum tuberosum HOM05D000155 ORTHO05D000022 1.0e-16 92.4 78 48.7
PGSC0003DMG400045895 Solanum tuberosum HOM05D000155 ORTHO05D000022 1.0e-16 92.4 103 36.9
Sopen08g020500 Solanum pennellii HOM05D000155 ORTHO05D000022 1.3e-16 92.0 67 59.7
Sopen08g024310 Solanum pennellii HOM05D000003 ORTHO05D000006 1.3e-16 92.0 73 54.8
PGSC0003DMG400045175 Solanum tuberosum HOM05D000155 ORTHO05D000022 1.3e-16 92.0 63 61.9
Solyc08g047990.1 Solanum lycopersicum HOM05D017709 ORTHO05D392321 2.9e-16 90.9 181 37.6
Sopen10g010480 Solanum pennellii HOM05D000155 ORTHO05D000022 6.5e-16 89.7 54 72.2
PGSC0003DMG400040103 Solanum tuberosum HOM05D000003 ORTHO05D000022 8.6e-16 89.4 89 44.9
Sopen09g022950 Solanum pennellii HOM05D000003 ORTHO05D000004 1.9e-15 88.2 91 54.9
Sopen10g007730 Solanum pennellii HOM05D000003 ORTHO05D000004 3.2e-15 87.4 142 39.4
Sopen06g007150 Solanum pennellii HOM05D000003 ORTHO05D000004 1.6e-14 85.1 102 35.3
Sopen05g012770 Solanum pennellii HOM05D000155 ORTHO05D000022 8.0e-14 82.8 58 63.8
Sopen10g015360 Solanum pennellii HOM05D000155 ORTHO05D000022 1.0e-13 82.4 61 60.7
Sopen09g018560 Solanum pennellii HOM05D008966 ORTHO05D023159 1.4e-13 82.0 221 31.7
Sopen09g012310 Solanum pennellii HOM05D000003 ORTHO05D000004 2.0e-12 78.2 77 45.5
Sopen11g012290 Solanum pennellii HOM05D000003 ORTHO05D000006 2.0e-12 78.2 55 63.6
Sopen11g012710 Solanum pennellii HOM05D000014 ORTHO05D000016 5.7e-12 76.6 57 59.6
Sopen07g013730 Solanum pennellii HOM05D000003 ORTHO05D000004 4.9e-11 73.6 80 47.5
Nitab4.5_0009438g0040 Nicotiana tabacum HOM05D009916 ORTHO05D014164 8.3e-11 72.8 75 37.3
PGSC0003DMG400046727 Solanum tuberosum HOM05D000003 ORTHO05D000004 1.4e-10 72.0 58 56.9
Nitab4.5_0005970g0030 Nicotiana tabacum HOM05D000032 ORTHO05D006669 1.8e-10 71.6 75 36.0
Sopen11g013390 Solanum pennellii HOM05D000024 ORTHO05D000007 1.8e-10 71.6 56 57.1
Sopen01g016010 Solanum pennellii HOM05D000003 ORTHO05D000022 2.4e-10 71.2 77 46.8
Nitab4.5_0006852g0020 Nicotiana tabacum HOM05D000155 ORTHO05D000022 3.1e-10 70.9 124 25.8
Sopen11g018190 Solanum pennellii HOM05D000003 ORTHO05D000004 3.1e-10 70.9 87 44.8
Sopen05g027300 Solanum pennellii HOM05D000017 ORTHO05D000013 4.1e-10 70.5 85 38.8
Sopen11g008060 Solanum pennellii HOM05D000003 ORTHO05D000004 4.1e-10 70.5 55 58.2
Lj7P241T13 Lonicera japonica HOM05D000155 ORTHO05D000022 5.4e-10 70.1 109 30.3
Sopen05g018060 Solanum pennellii HOM05D008663 ORTHO05D011127 5.4e-10 70.1 51 64.7
Sopen03g029130 Solanum pennellii HOM05D008663 ORTHO05D011127 7.0e-10 69.7 51 64.7
Lj2P663T6 Lonicera japonica HOM05D000155 ORTHO05D000022 9.2e-10 69.3 109 29.4
Sopen11g007960 Solanum pennellii HOM05D008562 ORTHO05D011465 2.7e-09 67.8 43 72.1
PGSC0003DMG400008628 Solanum tuberosum HOM05D000155 ORTHO05D000022 2.7e-09 67.8 80 31.2
Nitab4.5_0011737g0010 Nicotiana tabacum HOM05D012063 ORTHO05D000022 3.5e-09 67.4 75 37.3
PGSC0003DMG400046009 Solanum tuberosum HOM05D008663 ORTHO05D011127 5.9e-09 66.6 52 65.4
Nitab4.5_0001771g0080 Nicotiana tabacum HOM05D001426 ORTHO05D001389 7.8e-09 66.2 97 39.2
Nitab4.5_0000315g0080 Nicotiana tabacum HOM05D000155 ORTHO05D000022 1.3e-08 65.5 65 36.9
Sopen03g010890 Solanum pennellii HOM05D008663 ORTHO05D011127 1.3e-08 65.5 51 56.9
Sopen05g009840 Solanum pennellii HOM05D015646 ORTHO05D017131 1.7e-08 65.1 126 32.5
Sopen06g013190 Solanum pennellii HOM05D000003 ORTHO05D000022 1.7e-08 65.1 62 53.2
Cc03_g15170 Coffea canephora HOM05D000025 ORTHO05D000022 2.9e-08 64.3 88 31.8
Lj9P617T39 Lonicera japonica HOM05D000155 ORTHO05D000022 2.9e-08 64.3 95 30.5
Sopen09g014970 Solanum pennellii HOM05D008663 ORTHO05D011127 2.9e-08 64.3 51 60.8
PGSC0003DMG400037470 Solanum tuberosum HOM05D000003 ORTHO05D000004 2.9e-08 64.3 92 33.7
Sopen05g024990 Solanum pennellii HOM05D000003 ORTHO05D000006 3.8e-08 63.9 55 54.5
Sopen08g015220 Solanum pennellii HOM05D000024 ORTHO05D000007 3.8e-08 63.9 34 76.5
Nitab4.5_0001653g0020 Nicotiana tabacum HOM05D009916 ORTHO05D014164 5.0e-08 63.5 173 24.3
Nitab4.5_0005029g0020 Nicotiana tabacum HOM05D011511 ORTHO05D000022 6.6e-08 63.2 76 35.5
Sopen00g007260 Solanum pennellii HOM05D000003 ORTHO05D000004 6.6e-08 63.2 52 53.8
Sopen10g010410 Solanum pennellii HOM05D000070 ORTHO05D011127 6.6e-08 63.2 324 26.9
Sopen04g016850 Solanum pennellii HOM05D000024 ORTHO05D000006 8.6e-08 62.8 71 42.3
Sopen05g009430 Solanum pennellii HOM05D008663 ORTHO05D011127 8.6e-08 62.8 49 59.2
Nitab4.5_0001903g0110 Nicotiana tabacum HOM05D001426 ORTHO05D001389 1.1e-07 62.4 79 40.5
Peaxi162Scf00108g00112 Petunia axillaris HOM05D000155 ORTHO05D000022 1.1e-07 62.4 68 33.8
Nitab4.5_0004409g0020 Nicotiana tabacum HOM05D001426 ORTHO05D001389 1.5e-07 62.0 93 36.6
CAN.G1.8 Capsicum annuum HOM05D001426 ORTHO05D001389 1.9e-07 61.6 78 39.7
CAN.G1318.8 Capsicum annuum HOM05D001426 ORTHO05D001389 3.3e-07 60.8 104 33.7
CAN.G659.1 Capsicum annuum HOM05D001426 ORTHO05D001389 3.3e-07 60.8 104 33.7
CAN.G72.14 Capsicum annuum HOM05D001426 ORTHO05D001389 3.3e-07 60.8 104 33.7
Nitab4.5_0000249g0360 Nicotiana tabacum HOM05D009916 ORTHO05D000022 3.3e-07 60.8 72 34.7
Sopen03g010960 Solanum pennellii HOM05D008966 ORTHO05D011127 3.3e-07 60.8 59 44.1
Sopen06g013950 Solanum pennellii HOM05D000003 ORTHO05D000004 3.3e-07 60.8 55 50.9
Sopen09g016340 Solanum pennellii HOM05D000004 ORTHO05D000002 3.3e-07 60.8 55 50.9
PGSC0003DMG400041565 Solanum tuberosum HOM05D008966 ORTHO05D011465 4.3e-07 60.5 51 60.8
CAN.G1249.3 Capsicum annuum HOM05D009916 ORTHO05D014164 5.6e-07 60.1 92 29.3
MBI09_g18083_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 5.6e-07 60.1 73 34.2
Solyc00g500167.1 Solanum lycopersicum HOM05D001426 ORTHO05D001389 5.6e-07 60.1 77 40.3
PGSC0003DMG400012502 Solanum tuberosum HOM05D000003 ORTHO05D000004 5.6e-07 60.1 80 33.8
PGSC0003DMG400023605 Solanum tuberosum HOM05D000003 ORTHO05D000004 5.6e-07 60.1 80 33.8
PGSC0003DMG400043098 Solanum tuberosum HOM05D008966 ORTHO05D011465 5.6e-07 60.1 50 58.0
MBI10_g33987_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 7.3e-07 59.7 96 26.0
Sopen11g013960 Solanum pennellii HOM05D000003 ORTHO05D000006 7.3e-07 59.7 55 50.9
Lj6P673T55 Lonicera japonica HOM05D000155 ORTHO05D000022 9.5e-07 59.3 89 27.0
Nitab4.5_0008817g0010 Nicotiana tabacum HOM05D012063 ORTHO05D016351 9.5e-07 59.3 43 46.5
Sopen02g039300 Solanum pennellii HOM05D000003 ORTHO05D000004 9.5e-07 59.3 52 51.9
PGSC0003DMG400040298 Solanum tuberosum HOM05D008663 ORTHO05D011127 9.5e-07 59.3 43 65.1
Nitab4.5_0000543g0240 Nicotiana tabacum HOM05D012063 ORTHO05D016351 1.2e-06 58.9 53 45.3
Nitab4.5_0006480g0010 Nicotiana tabacum HOM05D000155 ORTHO05D000022 1.2e-06 58.9 99 29.3
Lj7P711T40 Lonicera japonica HOM05D000155 ORTHO05D000022 1.6e-06 58.5 97 28.9
Lj9P673T29 Lonicera japonica HOM05D000155 ORTHO05D000022 1.6e-06 58.5 120 27.5
Sopen11g008090 Solanum pennellii HOM05D000024 ORTHO05D000006 1.6e-06 58.5 60 46.7
MBI01_g01356_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 2.1e-06 58.2 86 34.9
MBI07_g30976_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 2.1e-06 58.2 98 28.6
MBI07_g00491_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 2.8e-06 57.8 99 32.3
MBI16_g07270_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 2.8e-06 57.8 78 35.9
Sopen00g001110 Solanum pennellii HOM05D000003 ORTHO05D000007 2.8e-06 57.8 52 48.1
MBI04_g22190_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 3.6e-06 57.4 136 25.7
Peaxi162Scf00091g01817 Petunia axillaris HOM05D000155 ORTHO05D000022 4.7e-06 57.0 59 39.0
Sopen03g013510 Solanum pennellii HOM05D000014 ORTHO05D000016 4.7e-06 57.0 55 49.1
Sopen08g017350 Solanum pennellii HOM05D000047 ORTHO05D000589 4.7e-06 57.0 52 50.0
MBI09_g13298_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000022 6.1e-06 56.6 117 29.9
MBI09_g16156_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 6.1e-06 56.6 79 36.7
Sopen08g015250 Solanum pennellii HOM05D000003 ORTHO05D000006 6.1e-06 56.6 54 48.1
Sopen09g030960 Solanum pennellii HOM05D000003 ORTHO05D000004 6.1e-06 56.6 53 45.3


User provided reference genes

Program Settings