Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen06g024060 Solanum pennellii HOM05D006564 ORTHO05D007772 4.0e-134 481.5 252 100.0
Solyc06g065620.2 Solanum lycopersicum HOM05D006564 ORTHO05D007772 5.8e-125 451.1 240 99.6
Nitab4.5_0004611g0020 Nicotiana tabacum HOM05D006564 ORTHO05D007772 1.7e-92 343.2 232 79.7
Peaxi162Scf00075g02124 Petunia axillaris HOM05D006564 ORTHO05D007772 2.4e-78 296.2 229 73.8
Dinv24837 Davidia involucrata HOM05D006564 ORTHO05D007772 7.9e-66 254.6 259 56.0
Actinidia01701 Actinidia chinensis HOM05D006564 ORTHO05D007772 2.2e-60 236.5 260 52.7
Thecc.02G252200 Theobroma cacao HOM05D006564 ORTHO05D007772 1.4e-59 233.8 258 49.2
Hma1.2p1_0536F.1_g173940 Hydrangea macrophylla HOM05D006564 ORTHO05D007772 2.5e-59 233.0 256 52.0
TAR622G0653 Trochodendron aralioides HOM05D006564 ORTHO05D007772 1.2e-58 230.7 259 50.6
RcHm_v2.0_Chr4g0443691 Rosa chinensis HOM05D006564 ORTHO05D007772 2.4e-54 216.5 258 46.9
QL03p059806 Quercus lobata HOM05D006564 ORTHO05D007772 5.3e-54 215.3 282 45.0
Prupe.1G251700 Prunus persica HOM05D006564 ORTHO05D007772 2.9e-52 209.5 251 49.0
MD16G1094900 Malus domestica HOM05D006564 ORTHO05D007772 5.0e-52 208.8 260 45.4
Ciclev10033458m.g Citrus clementina HOM05D006564 ORTHO05D007772 1.2e-50 204.1 247 45.3
Gohir.A06G086900 Gossypium hirsutum HOM05D006564 ORTHO05D007772 1.2e-50 204.1 258 44.6
FvH4_4g34230 Fragaria vesca HOM05D006564 ORTHO05D007772 4.7e-50 202.2 259 44.0
Oeu056406.1 Olea europaea HOM05D006564 ORTHO05D007772 8.0e-50 201.4 254 45.3
CANSAT01G1831 Cannabis sativa HOM05D006564 ORTHO05D007772 1.8e-49 200.3 259 44.4
Nn3g16844 Nelumbo nucifera HOM05D006564 ORTHO05D007772 2.3e-49 199.9 257 44.0
Potri.010G041900 Populus trichocarpa HOM05D006564 ORTHO05D007772 2.3e-49 199.9 259 43.2
Migut.E00617 Erythranthe guttata HOM05D006564 ORTHO05D007772 3.0e-49 199.5 242 45.9
FAN17G1546 Fragaria x ananassa HOM05D006564 ORTHO05D007772 5.2e-49 198.7 257 43.2
CiPaw.05G152600 Carya illinoinensis HOM05D006564 ORTHO05D007772 6.8e-49 198.4 248 44.0
Lj2g0026051 Lotus japonicus HOM05D006564 ORTHO05D007772 5.7e-48 195.3 259 43.6
Aqoxy3G02914 Aquilegia oxysepala HOM05D006564 ORTHO05D007772 2.2e-47 193.4 257 43.6
PGSC0003DMG401026086 Solanum tuberosum HOM05D006564 ORTHO05D007772 4.8e-47 192.2 165 69.1
Gorai.010G099700 Gossypium raimondii HOM05D006564 ORTHO05D007772 1.1e-46 191.0 288 40.3
Gohir.D06G086400 Gossypium hirsutum HOM05D006564 ORTHO05D007772 1.4e-46 190.7 287 40.4
PSO832G2728 Papaver somniferum HOM05D006564 ORTHO05D007772 1.8e-46 190.3 255 43.5
ECA234G3669 Erigeron canadensis HOM05D006564 ORTHO05D007772 5.3e-46 188.7 269 40.5
Migut.E00581 Erythranthe guttata HOM05D006564 ORTHO05D007772 5.3e-46 188.7 236 45.8
Glyma.01G029900 Glycine max HOM05D006564 ORTHO05D007772 7.0e-46 188.3 256 43.0
FAN07G0775 Fragaria x ananassa HOM05D006564 ORTHO05D007772 1.2e-45 187.6 268 41.8
TPR.G21085 Trifolium pratense HOM05D006564 ORTHO05D007772 2.0e-45 186.8 262 43.9
Medtr5g034180 Medicago truncatula HOM05D006564 ORTHO05D007772 4.5e-45 185.7 258 43.8
Psat2g104680 Pisum sativum HOM05D006564 ORTHO05D007772 4.5e-45 185.7 250 45.6
Thhalv10023451m.g Eutrema salsugineum HOM05D006564 ORTHO05D007772 3.8e-44 182.6 259 41.3
THA.LOC104827560 Tarenaya hassleriana HOM05D006564 ORTHO05D007772 1.9e-43 180.3 257 42.0
TWI75G0104 Tripterygium wilfordii HOM05D006564 ORTHO05D007772 2.5e-43 179.9 238 43.3
CARHR052570 Cardamine hirsuta HOM05D006564 ORTHO05D007772 9.4e-43 177.9 260 41.2
PSO063G0329 Papaver somniferum HOM05D006564 ORTHO05D007772 1.2e-42 177.6 266 41.0
SGA_v2.0_scaffold276G46631 Striga asiatica HOM05D006564 ORTHO05D007772 2.1e-42 176.8 259 39.4
PGR119G0202 Punica granatum HOM05D006564 ORTHO05D007772 2.7e-42 176.4 260 39.6
VMungo1215G0480 Vigna mungo HOM05D006564 ORTHO05D007772 2.7e-42 176.4 241 42.3
GSVIVG01013762001 Vitis vinifera HOM05D006564 ORTHO05D007772 3.6e-42 176.0 255 40.8
Sed0020482 Sechium edule HOM05D006564 ORTHO05D007772 1.0e-41 174.5 253 37.9
arahy.Tifrunner.gnm1.ann1.T8BVJ1 Arachis hypogaea HOM05D006564 ORTHO05D007772 2.3e-41 173.3 250 42.0
AL2G16230 Arabidopsis lyrata HOM05D006564 ORTHO05D007772 5.2e-41 172.2 259 39.0
Aa31LG2G9990 Aethionema arabicum HOM05D006564 ORTHO05D007772 6.8e-41 171.8 258 39.1
Carub.0002s0487 Capsella rubella HOM05D006564 ORTHO05D007772 6.8e-41 171.8 257 40.1
Manes.13G029100 Manihot esculenta HOM05D006564 ORTHO05D007772 2.0e-40 170.2 231 42.9
MBI16_g27088_MAGBIO Magnolia biondii HOM05D006564 ORTHO05D007772 3.4e-40 169.5 267 38.2
A01p29270 Brassica napus HOM05D006564 ORTHO05D007772 4.4e-40 169.1 259 39.0
Cc11_g15240 Coffea canephora HOM05D006564 ORTHO05D007772 3.7e-39 166.0 260 40.4
SalBow1G6981 Salvia bowleyana HOM05D006564 ORTHO05D007772 3.7e-39 166.0 235 43.0
AT1G60460 Arabidopsis thaliana HOM05D006564 ORTHO05D007772 4.8e-39 165.6 259 38.2
EL10Ac6g13691 Beta vulgaris HOM05D006564 ORTHO05D007772 1.1e-38 164.5 248 40.7
Sp2g04270 Schrenkiella parvula HOM05D006564 ORTHO05D007772 1.4e-38 164.1 259 39.4
Haze_12197 Corylus avellana HOM05D006564 ORTHO05D007772 7.0e-38 161.8 260 36.5
BcaC09g49405 Brassica carinata HOM05D006564 ORTHO05D007772 1.2e-37 161.0 259 37.8
C01p37040 Brassica napus HOM05D006564 ORTHO05D007772 1.2e-37 161.0 259 37.8
Lj3A1053G47 Lonicera japonica HOM05D006564 ORTHO05D007772 2.0e-37 160.2 189 46.0
arahy.Tifrunner.gnm1.ann1.FI0FWQ Arachis hypogaea HOM05D006564 ORTHO05D007772 2.7e-37 159.8 250 40.0
Lalb_Chr05g0216821 Lupinus albus HOM05D006564 ORTHO05D007772 2.7e-37 159.8 264 39.8
Nitab4.5_0003128g0060 Nicotiana tabacum HOM05D006564 ORTHO05D007772 2.7e-37 159.8 192 52.1
Rhsim12G0044200 Rhododendron simsii HOM05D006564 ORTHO05D007772 5.9e-37 158.7 285 38.6
BraA01t03060Z Brassica rapa HOM05D006564 ORTHO05D007772 1.3e-36 157.5 266 37.6
BcaB04g20267 Brassica carinata HOM05D006564 ORTHO05D007772 2.9e-36 156.4 258 37.6
BolC1t03666H Brassica oleracea HOM05D006564 ORTHO05D007772 3.3e-35 152.9 260 37.7
Atru.chr11.2047 Acer truncatum HOM05D006564 ORTHO05D007772 2.1e-34 150.2 249 39.4
Lsat_1_v5_gn_4_5380 Lactuca sativa HOM05D006564 ORTHO05D007772 3.6e-34 149.4 233 39.9
Hund06003 Selenicereus undatus HOM05D006564 ORTHO05D007772 3.7e-31 139.4 185 43.8
Cfa009164 Carpinus fangiana HOM05D006564 ORTHO05D007772 8.3e-31 138.3 209 39.2
Phvul.002G070600 Phaseolus vulgaris HOM05D006564 ORTHO05D007772 7.0e-30 135.2 165 42.4
Glyma.02G035501 Glycine max HOM05D006564 ORTHO05D007772 2.1e-26 123.6 148 42.6
HanXRQChr12g0383581 Helianthus annuus HOM05D006564 ORTHO05D007772 1.1e-22 111.3 149 39.6
COL.COLO4_24191 Corchorus olitorius HOM05D006564 ORTHO05D007772 2.4e-22 110.2 219 35.2
ClCG08G017970 Citrullus lanatus HOM05D006564 ORTHO05D007772 1.0e-20 104.8 176 34.1
CsaV3_2G024630 Cucumis sativus L. HOM05D006564 ORTHO05D007772 1.3e-20 104.4 254 30.7
Sabra10G0025500 Salix brachista HOM05D006564 ORTHO05D007772 1.7e-20 104.0 169 36.7
unitig_744.g23977 Utricularia gibba HOM05D006564 ORTHO05D007772 8.6e-20 101.7 208 31.7
Sc04g0009220 Simmondsia chinensis HOM05D006564 ORTHO05D007772 1.6e-18 97.4 170 40.0
AUR62014056 Chenopodium quinoa HOM05D006564 ORTHO05D007772 2.1e-18 97.1 256 32.8
MELO3C010665.2 Cucumis melo HOM05D006564 ORTHO05D007772 4.0e-17 92.8 275 28.7
Zm00001eb227420 Zea mays HOM05D006564 ORTHO05D007772 1.6e-13 80.9 118 38.1
AUR62005394 Chenopodium quinoa HOM05D006564 ORTHO05D007772 3.5e-13 79.7 196 34.7
Ca_03150_v3 Cicer arietinum L. HOM05D006564 ORTHO05D007772 1.0e-12 78.2 72 48.6
Cpa.g.sc69.59 Carica papaya HOM05D006564 ORTHO05D007772 6.2e-10 68.9 70 52.9
Hund06002 Selenicereus undatus HOM05D006564 ORTHO05D007772 8.9e-09 65.1 68 51.5
Gohir.D06G182100 Gossypium hirsutum HOM05D006564 ORTHO05D007772 3.7e-07 59.7 62 53.2
HPP92_021828 Vanilla planifolia HOM05D006564 ORTHO05D007772 1.9e-06 57.4 172 32.0


User provided reference genes

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