Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen05g015530 Solanum pennellii HOM05D000155 ORTHO05D000022 7.3e-74 280.4 136 100.0
PGSC0003DMG400040103 Solanum tuberosum HOM05D000003 ORTHO05D000022 1.6e-25 119.8 94 56.4
Sopen06g016720 Solanum pennellii HOM05D000024 ORTHO05D017131 5.9e-23 111.3 109 49.5
Sopen09g012310 Solanum pennellii HOM05D000003 ORTHO05D000004 6.5e-22 107.8 93 50.5
Sopen00g001100 Solanum pennellii HOM05D000003 ORTHO05D000004 2.5e-21 105.9 93 50.5
PGSC0003DMG400037358 Solanum tuberosum HOM05D000155 ORTHO05D000022 4.2e-21 105.1 83 56.6
Sopen05g018930 Solanum pennellii HOM05D000155 ORTHO05D000022 5.5e-21 104.8 94 46.8
PGSC0003DMG400045895 Solanum tuberosum HOM05D000155 ORTHO05D000022 2.3e-19 99.4 94 46.8
PGSC0003DMG400041121 Solanum tuberosum HOM05D000155 ORTHO05D000022 2.5e-18 95.9 92 48.9
PGSC0003DMG400037470 Solanum tuberosum HOM05D000003 ORTHO05D000004 3.3e-18 95.5 94 45.7
Sopen05g017800 Solanum pennellii HOM05D000155 ORTHO05D000022 6.3e-17 91.3 93 47.3
PGSC0003DMG400040069 Solanum tuberosum HOM05D000155 ORTHO05D000022 6.3e-17 91.3 91 44.0
PGSC0003DMG400041332 Solanum tuberosum HOM05D000155 ORTHO05D000022 6.3e-17 91.3 68 60.3
Sopen03g008140 Solanum pennellii HOM05D000014 ORTHO05D000016 1.1e-16 90.5 93 45.2
Sopen08g017350 Solanum pennellii HOM05D000047 ORTHO05D000589 2.4e-16 89.4 74 54.1
Sopen08g020500 Solanum pennellii HOM05D000155 ORTHO05D000022 5.3e-16 88.2 92 45.7
Sopen02g002350 Solanum pennellii HOM05D000014 ORTHO05D000016 6.9e-16 87.8 92 44.6
Sopen12g016250 Solanum pennellii HOM05D000003 ORTHO05D000004 2.0e-15 86.3 92 43.5
Sopen05g018040 Solanum pennellii HOM05D000155 ORTHO05D000022 3.4e-15 85.5 93 44.1
Sopen08g015470 Solanum pennellii HOM05D000155 ORTHO05D000022 3.4e-15 85.5 93 44.1
Sopen08g024310 Solanum pennellii HOM05D000003 ORTHO05D000006 3.4e-15 85.5 93 44.1
Sopen01g026920 Solanum pennellii HOM05D000003 ORTHO05D000022 5.9e-15 84.7 89 46.1
Sopen03g011360 Solanum pennellii HOM05D000155 ORTHO05D000022 5.9e-15 84.7 92 43.5
Sopen06g003730 Solanum pennellii HOM05D000155 ORTHO05D000022 1.0e-14 84.0 93 41.9
Sopen05g017830 Solanum pennellii HOM05D000004 ORTHO05D000022 1.3e-14 83.6 93 41.9
Sopen11g007990 Solanum pennellii HOM05D000155 ORTHO05D000022 1.3e-14 83.6 90 44.4
PGSC0003DMG400025606 Solanum tuberosum HOM05D000155 ORTHO05D000022 1.7e-14 83.2 83 45.8
Sopen03g010900 Solanum pennellii HOM05D000155 ORTHO05D000022 2.2e-14 82.8 93 43.0
Sopen09g017040 Solanum pennellii HOM05D000003 ORTHO05D000004 2.2e-14 82.8 92 39.1
PGSC0003DMG400039694 Solanum tuberosum HOM05D000155 ORTHO05D000022 2.2e-14 82.8 93 44.1
Sopen00g003390 Solanum pennellii HOM05D000003 ORTHO05D000004 3.8e-14 82.0 92 42.4
Sopen02g008700 Solanum pennellii HOM05D000003 ORTHO05D000022 3.8e-14 82.0 92 41.3
PGSC0003DMG400029909 Solanum tuberosum HOM05D000024 ORTHO05D000022 3.8e-14 82.0 77 48.1
Sopen05g017850 Solanum pennellii HOM05D000155 ORTHO05D000022 5.0e-14 81.6 89 46.1
Sopen08g015240 Solanum pennellii HOM05D000003 ORTHO05D000004 6.5e-14 81.3 92 43.5
Sopen11g007980 Solanum pennellii HOM05D000014 ORTHO05D000016 6.5e-14 81.3 111 39.6
Sopen11g012220 Solanum pennellii HOM05D000004 ORTHO05D000002 8.5e-14 80.9 74 52.7
PGSC0003DMG400046872 Solanum tuberosum HOM05D000003 ORTHO05D000022 8.5e-14 80.9 84 44.0
Sopen11g008100 Solanum pennellii HOM05D000003 ORTHO05D000004 1.1e-13 80.5 90 43.3
Sopen08g015220 Solanum pennellii HOM05D000024 ORTHO05D000007 1.4e-13 80.1 90 43.3
Sopen00g003380 Solanum pennellii HOM05D000155 ORTHO05D000022 1.9e-13 79.7 92 44.6
Sopen00g003540 Solanum pennellii HOM05D000003 ORTHO05D000004 1.9e-13 79.7 92 44.6
Sopen06g012050 Solanum pennellii HOM05D000155 ORTHO05D000022 1.9e-13 79.7 89 42.7
Nitab4.5_0004015g0090 Nicotiana tabacum HOM05D000155 ORTHO05D000022 4.2e-13 78.6 93 39.8
PGSC0003DMG400045175 Solanum tuberosum HOM05D000155 ORTHO05D000022 4.2e-13 78.6 88 43.2
Sopen03g013510 Solanum pennellii HOM05D000014 ORTHO05D000016 5.5e-13 78.2 109 40.4
Sopen05g020290 Solanum pennellii HOM05D000155 ORTHO05D000022 7.2e-13 77.8 89 41.6
Sopen11g007850 Solanum pennellii HOM05D000155 ORTHO05D000022 7.2e-13 77.8 93 38.7
Sopen05g012770 Solanum pennellii HOM05D000155 ORTHO05D000022 9.4e-13 77.4 89 41.6
Sopen00g001090 Solanum pennellii HOM05D000003 ORTHO05D000004 1.6e-12 76.6 87 43.7
Sopen09g015010 Solanum pennellii HOM05D000003 ORTHO05D000022 1.6e-12 76.6 93 36.6
PGSC0003DMG400035792 Solanum tuberosum HOM05D000155 ORTHO05D000022 2.7e-12 75.9 92 37.0
Sopen04g014310 Solanum pennellii HOM05D000155 ORTHO05D000022 3.6e-12 75.5 92 40.2
Sopen05g012830 Solanum pennellii HOM05D000155 ORTHO05D000022 3.6e-12 75.5 89 38.2
Nitab4.5_0000122g0080 Nicotiana tabacum HOM05D000155 ORTHO05D000022 4.7e-12 75.1 90 43.3
Sopen09g009790 Solanum pennellii HOM05D000155 ORTHO05D000022 4.7e-12 75.1 88 39.8
Sopen11g008120 Solanum pennellii HOM05D000014 ORTHO05D000016 4.7e-12 75.1 90 42.2
Sopen09g018560 Solanum pennellii HOM05D008966 ORTHO05D023159 1.8e-11 73.2 77 44.2
Sopen04g016850 Solanum pennellii HOM05D000024 ORTHO05D000006 2.3e-11 72.8 65 52.3
Sopen10g010400 Solanum pennellii HOM05D000155 ORTHO05D000022 2.3e-11 72.8 89 42.7
Sopen03g012440 Solanum pennellii HOM05D000004 ORTHO05D000022 3.0e-11 72.4 92 40.2
Sopen10g010510 Solanum pennellii HOM05D008663 ORTHO05D011127 3.0e-11 72.4 77 46.8
Sopen10g010480 Solanum pennellii HOM05D000155 ORTHO05D000022 3.9e-11 72.0 93 38.7
Sopen11g008140 Solanum pennellii HOM05D000024 ORTHO05D000022 6.7e-11 71.2 87 40.2
Sopen01g024750 Solanum pennellii HOM05D000155 ORTHO05D000022 8.8e-11 70.9 80 42.5
Sopen01g016010 Solanum pennellii HOM05D000003 ORTHO05D000022 1.1e-10 70.5 86 39.5
Sopen05g012800 Solanum pennellii HOM05D000024 ORTHO05D000007 1.1e-10 70.5 88 43.2
Peaxi162Scf00138g01512 Petunia axillaris HOM05D000155 ORTHO05D000022 2.0e-10 69.7 84 39.3
PGSC0003DMG400035720 Solanum tuberosum HOM05D026012 ORTHO05D000006 2.6e-10 69.3 85 40.0
Sopen01g005290 Solanum pennellii HOM05D000155 ORTHO05D000022 3.3e-10 68.9 78 42.3
Peaxi162Scf01149g10016 Petunia axillaris HOM05D000155 ORTHO05D000022 7.4e-10 67.8 85 37.6
Sopen09g015020 Solanum pennellii HOM05D000024 ORTHO05D000007 7.4e-10 67.8 78 44.9
Sopen06g013190 Solanum pennellii HOM05D000003 ORTHO05D000022 9.7e-10 67.4 133 24.8
Peaxi162Scf00700g00035 Petunia axillaris HOM05D000155 ORTHO05D000022 1.3e-09 67.0 84 36.9
Peaxi162Scf00700g00339 Petunia axillaris HOM05D000273 ORTHO05D000022 1.3e-09 67.0 84 36.9
Nitab4.5_0003072g0080 Nicotiana tabacum HOM05D000155 ORTHO05D000022 2.2e-09 66.2 85 37.6
Sopen02g005190 Solanum pennellii HOM05D000004 ORTHO05D000004 2.2e-09 66.2 44 59.1
Sopen06g007150 Solanum pennellii HOM05D000003 ORTHO05D000004 2.8e-09 65.9 44 59.1
PGSC0003DMG400034828 Solanum tuberosum HOM05D000155 ORTHO05D000022 2.8e-09 65.9 78 41.0
Nitab4.5_0000007g0390 Nicotiana tabacum HOM05D000155 ORTHO05D000022 3.7e-09 65.5 80 41.2
Sopen11g018190 Solanum pennellii HOM05D000003 ORTHO05D000004 3.7e-09 65.5 42 61.9
Sopen08g015460 Solanum pennellii HOM05D000155 ORTHO05D000022 4.8e-09 65.1 70 44.3
PGSC0003DMG400037811 Solanum tuberosum HOM05D000155 ORTHO05D000022 6.3e-09 64.7 87 32.2
Nitab4.5_0000692g0240 Nicotiana tabacum HOM05D000155 ORTHO05D000022 8.2e-09 64.3 85 35.3
Nitab4.5_0000084g0340 Nicotiana tabacum HOM05D000155 ORTHO05D000022 1.4e-08 63.5 93 33.3
Peaxi162Scf00109g00107 Petunia axillaris HOM05D000155 ORTHO05D000022 1.8e-08 63.2 91 38.5
Sopen04g008670 Solanum pennellii HOM05D000155 ORTHO05D000022 1.8e-08 63.2 112 32.1
Nitab4.5_0000455g0050 Nicotiana tabacum HOM05D000155 ORTHO05D000022 3.1e-08 62.4 87 33.3
Sopen10g010450 Solanum pennellii HOM05D000003 ORTHO05D000004 4.1e-08 62.0 90 36.7
CAN.G126.22 Capsicum annuum HOM05D000155 ORTHO05D000022 5.3e-08 61.6 88 31.8
Nitab4.5_0003475g0050 Nicotiana tabacum HOM05D000155 ORTHO05D000022 7.0e-08 61.2 89 30.3
Peaxi162Scf00109g00093 Petunia axillaris HOM05D000155 ORTHO05D000022 9.1e-08 60.8 87 39.1
Sopen02g039300 Solanum pennellii HOM05D000003 ORTHO05D000004 9.1e-08 60.8 51 58.8
Sopen11g013390 Solanum pennellii HOM05D000024 ORTHO05D000007 9.1e-08 60.8 58 50.0
MBI15_g14062_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 1.2e-07 60.5 67 43.3
Nitab4.5_0000206g0020 Nicotiana tabacum HOM05D000155 ORTHO05D000022 2.6e-07 59.3 93 33.3
Nitab4.5_0000008g0280 Nicotiana tabacum HOM05D000155 ORTHO05D000022 3.4e-07 58.9 105 33.3
PGSC0003DMG400037922 Solanum tuberosum HOM05D000155 ORTHO05D000022 3.4e-07 58.9 88 34.1
Peaxi162Scf00160g01638 Petunia axillaris HOM05D000155 ORTHO05D000022 4.5e-07 58.5 87 33.3
MBI07_g22360_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 5.9e-07 58.2 69 43.5
Peaxi162Scf00477g00022 Petunia axillaris HOM05D000155 ORTHO05D000022 5.9e-07 58.2 117 31.6
Sopen11g008050 Solanum pennellii HOM05D000155 ORTHO05D000022 5.9e-07 58.2 62 46.8
MBI08_g29120_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 7.7e-07 57.8 72 34.7
Peaxi162Scf00014g01614 Petunia axillaris HOM05D000155 ORTHO05D000022 7.7e-07 57.8 87 32.2
Sopen06g013970 Solanum pennellii HOM05D000003 ORTHO05D000004 7.7e-07 57.8 63 39.7
MBI04_g26264_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 1.0e-06 57.4 66 42.4
Nitab4.5_0000106g0410 Nicotiana tabacum HOM05D000155 ORTHO05D000022 1.0e-06 57.4 96 34.4
Sopen09g022950 Solanum pennellii HOM05D000003 ORTHO05D000004 1.0e-06 57.4 81 34.6
MBI07_g03819_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 1.3e-06 57.0 78 37.2
MBI07_g44592_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 1.3e-06 57.0 75 37.3
Nitab4.5_0004637g0040 Nicotiana tabacum HOM05D000155 ORTHO05D000022 1.3e-06 57.0 90 35.6
Nitab4.5_0008823g0030 Nicotiana tabacum HOM05D000155 ORTHO05D000022 1.3e-06 57.0 90 32.2
MBI02_g01137_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 1.7e-06 56.6 62 46.8
MBI02_g43286_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 1.7e-06 56.6 65 44.6
Sopen06g013950 Solanum pennellii HOM05D000003 ORTHO05D000004 2.2e-06 56.2 59 45.8
CiPaw.03G110900 Carya illinoinensis HOM05D000155 ORTHO05D000022 2.9e-06 55.8 68 41.2
Sopen11g007870 Solanum pennellii HOM05D000155 ORTHO05D000007 2.9e-06 55.8 60 43.3
MBI07_g15429_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 3.8e-06 55.5 66 43.9
MBI08_g15722_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 3.8e-06 55.5 68 42.6
MBI08_g25833_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 3.8e-06 55.5 70 37.1
MBI08_g35488_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 3.8e-06 55.5 66 39.4
MBI15_g34795_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 3.8e-06 55.5 66 43.9
MBI16_g08497_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 3.8e-06 55.5 69 37.7
Peaxi162Scf00041g00183 Petunia axillaris HOM05D000155 ORTHO05D000022 3.8e-06 55.5 83 34.9
Peaxi162Scf00761g00311 Petunia axillaris HOM05D000155 ORTHO05D000022 3.8e-06 55.5 70 38.6
Sopen03g011810 Solanum pennellii HOM05D000004 ORTHO05D000034 3.8e-06 55.5 58 46.6
PGSC0003DMG400020870 Solanum tuberosum HOM05D000155 ORTHO05D000022 3.8e-06 55.5 88 34.1
PGSC0003DMG400024870 Solanum tuberosum HOM05D000155 ORTHO05D000022 3.8e-06 55.5 59 37.3
Thecc.03G325600 Theobroma cacao HOM05D000003 ORTHO05D000006 3.8e-06 55.5 91 30.8
MBI05_g15349_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 5.0e-06 55.1 67 38.8
MBI18_g23708_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 5.0e-06 55.1 65 40.0
Nitab4.5_0000007g0350 Nicotiana tabacum HOM05D000155 ORTHO05D000022 5.0e-06 55.1 63 41.3
Nitab4.5_0001836g0010 Nicotiana tabacum HOM05D000155 ORTHO05D000022 5.0e-06 55.1 128 29.7
Nitab4.5_0002363g0020 Nicotiana tabacum HOM05D000679 ORTHO05D000482 5.0e-06 55.1 69 33.3
Nitab4.5_0003347g0020 Nicotiana tabacum HOM05D000155 ORTHO05D000022 5.0e-06 55.1 71 36.6
Nitab4.5_0003349g0070 Nicotiana tabacum HOM05D000155 ORTHO05D000022 5.0e-06 55.1 70 35.7
Nitab4.5_0008487g0020 Nicotiana tabacum HOM05D007813 ORTHO05D009861 5.0e-06 55.1 70 34.3
Nitab4.5_0011459g0020 Nicotiana tabacum HOM05D000155 ORTHO05D000022 5.0e-06 55.1 74 36.5
Peaxi162Scf00195g01226 Petunia axillaris HOM05D000155 ORTHO05D000022 5.0e-06 55.1 67 37.3
MBI15_g44988_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 6.5e-06 54.7 70 34.3
MBI16_g20728_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 6.5e-06 54.7 69 37.7
Nitab4.5_0000036g0160 Nicotiana tabacum HOM05D000155 ORTHO05D000022 6.5e-06 54.7 86 32.6
Peaxi162Scf00362g00102 Petunia axillaris HOM05D009863 ORTHO05D000022 6.5e-06 54.7 71 38.0
Peaxi162Scf00776g00232 Petunia axillaris HOM05D000155 ORTHO05D000022 6.5e-06 54.7 71 38.0
Sopen01g005170 Solanum pennellii HOM05D000155 ORTHO05D000022 6.5e-06 54.7 83 31.3
Sopen02g028750 Solanum pennellii HOM05D000155 ORTHO05D000022 6.5e-06 54.7 83 31.3
Sopen07g021380 Solanum pennellii HOM05D000155 ORTHO05D000034 6.5e-06 54.7 83 31.3
CAN.G883.22 Capsicum annuum HOM05D000155 ORTHO05D000022 8.5e-06 54.3 83 33.7
MBI17_g44070_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 8.5e-06 54.3 69 39.1
Nitab4.5_0000508g0150 Nicotiana tabacum HOM05D000155 ORTHO05D000022 8.5e-06 54.3 71 36.6
Sopen02g011140 Solanum pennellii HOM05D000044 ORTHO05D002860 8.5e-06 54.3 48 45.8
Sopen11g015660 Solanum pennellii HOM05D000003 ORTHO05D023159 8.5e-06 54.3 79 34.2


User provided reference genes

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