Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc04g008750.3 Solanum lycopersicum HOM05D004582 ORTHO05D005507 5.7e-67 257.3 117 100.0
Sopen04g003930 Solanum pennellii HOM05D004582 ORTHO05D005507 5.7e-67 257.3 117 100.0
PGSC0003DMG400025297 Solanum tuberosum HOM05D004582 ORTHO05D005507 1.3e-66 256.1 117 99.1
CAN.G419.18 Capsicum annuum HOM05D004582 ORTHO05D005507 2.6e-64 248.4 118 97.5
Potri.010G255000 Populus trichocarpa HOM05D004582 ORTHO05D005507 4.2e-62 241.1 117 91.5
Cfa005243 Carpinus fangiana HOM05D004582 ORTHO05D005507 5.5e-62 240.7 117 89.7
Peaxi162Scf00329g00317 Petunia axillaris HOM05D004582 ORTHO05D005507 1.2e-61 239.6 118 94.1
Ciclev10017231m.g Citrus clementina HOM05D004582 ORTHO05D005507 1.6e-61 239.2 115 92.2
Manes.01G004880 Manihot esculenta HOM05D004582 ORTHO05D005507 1.6e-61 239.2 117 90.6
Potri.008G002400 Populus trichocarpa HOM05D004582 ORTHO05D005507 3.6e-61 238.0 117 90.6
CiPaw.06G093300 Carya illinoinensis HOM05D004582 ORTHO05D005507 4.7e-61 237.7 117 89.7
Sed0002882 Sechium edule HOM05D004582 ORTHO05D005507 4.7e-61 237.7 117 89.7
CANSAT78G1495 Cannabis sativa HOM05D004582 ORTHO05D005507 6.1e-61 237.3 117 88.9
Duzib248G0155 Durio zibethinus HOM05D004582 ORTHO05D005507 6.1e-61 237.3 117 89.7
Thecc.02G151700 Theobroma cacao HOM05D004582 ORTHO05D005507 8.0e-61 236.9 117 89.7
Gohir.A04G109900 Gossypium hirsutum HOM05D004582 ORTHO05D005507 1.8e-60 235.7 117 88.9
Gohir.D04G150100 Gossypium hirsutum HOM05D004582 ORTHO05D005507 1.8e-60 235.7 117 88.9
Gorai.012G136700 Gossypium raimondii HOM05D004582 ORTHO05D005507 1.8e-60 235.7 117 88.9
MELO3C023752.2 Cucumis melo HOM05D004582 ORTHO05D005507 2.3e-60 235.3 117 88.9
CsaV3_3G020290 Cucumis sativus L. HOM05D004582 ORTHO05D005507 2.3e-60 235.3 117 88.9
CSS0028000 Camellia sinensis var. sinensis HOM05D004582 ORTHO05D005507 3.9e-60 234.6 112 92.9
Sed0027851 Sechium edule HOM05D004582 ORTHO05D005507 8.8e-60 233.4 117 88.0
vmacro00989 Vaccinium macrocarpon HOM05D004582 ORTHO05D005507 3.3e-59 231.5 116 88.8
Cc11_g00370 Coffea canephora HOM05D004582 ORTHO05D005507 4.4e-59 231.1 112 91.1
Hma1.2p1_2673F.1_g326700 Hydrangea macrophylla HOM05D004582 ORTHO05D005507 5.7e-59 230.7 115 91.3
Nitab4.5_0000129g0010 Nicotiana tabacum HOM05D004582 ORTHO05D005507 7.4e-59 230.3 118 91.5
MSTRG.25043 Avicennia marina HOM05D004582 ORTHO05D005507 9.7e-59 229.9 114 86.0
SGA_v2.0_scaffold231G43443 Striga asiatica HOM05D004582 ORTHO05D005507 9.7e-59 229.9 116 86.2
Actinidia04370 Actinidia chinensis HOM05D004582 ORTHO05D005507 2.2e-58 228.8 112 90.2
Atru.chr11.27 Acer truncatum HOM05D004582 ORTHO05D005507 2.8e-58 228.4 115 87.8
GSVIVG01034346001 Vitis vinifera HOM05D004582 ORTHO05D005507 3.7e-58 228.0 113 88.5
THA.LOC104819361 Tarenaya hassleriana HOM05D004582 ORTHO05D005507 1.1e-57 226.5 117 84.6
MSTRG.1036 Avicennia marina HOM05D004582 ORTHO05D005507 1.4e-57 226.1 116 82.8
SalBow6G5789 Salvia bowleyana HOM05D004582 ORTHO05D005507 1.8e-57 225.7 116 84.5
SalBow8G4318 Salvia bowleyana HOM05D004582 ORTHO05D005507 1.8e-57 225.7 116 84.5
Migut.N02765 Erythranthe guttata HOM05D004582 ORTHO05D005507 4.1e-57 224.6 116 83.6
Gohir.D13G059000 Gossypium hirsutum HOM05D004582 ORTHO05D005507 5.3e-57 224.2 117 84.6
Eucgr.G02614 Eucalyptus grandis HOM05D004582 ORTHO05D005507 7.0e-57 223.8 119 84.9
Lalb_Chr10g0094681 Lupinus albus HOM05D004582 ORTHO05D005507 7.0e-57 223.8 117 85.5
THA.LOC104800345 Tarenaya hassleriana HOM05D004582 ORTHO05D005507 7.0e-57 223.8 117 83.8
Gohir.A13G062900 Gossypium hirsutum HOM05D004582 ORTHO05D005507 9.1e-57 223.4 117 83.8
PGR142G2001 Punica granatum HOM05D004582 ORTHO05D005507 2.6e-56 221.9 119 84.0
Ca_16312_v3 Cicer arietinum L. HOM05D004582 ORTHO05D005507 4.5e-56 221.1 118 83.9
TWI15G0512 Tripterygium wilfordii HOM05D004582 ORTHO05D005507 4.5e-56 221.1 119 84.9
TAR629G2421 Trochodendron aralioides HOM05D004582 ORTHO05D005507 7.7e-56 220.3 117 83.8
Glyma.17G000400 Glycine max HOM05D004582 ORTHO05D005507 1.7e-55 219.2 117 82.1
Hma1.2p1_1901F.1_g307030 Hydrangea macrophylla HOM05D004582 ORTHO05D005507 1.7e-55 219.2 108 92.6
Hund08683 Selenicereus undatus HOM05D004582 ORTHO05D005507 2.2e-55 218.8 115 83.5
Lsat_1_v5_gn_1_108541 Lactuca sativa HOM05D004582 ORTHO05D005507 2.9e-55 218.4 112 86.6
Phvul.001G068300 Phaseolus vulgaris HOM05D004582 ORTHO05D005507 2.9e-55 218.4 117 82.1
Sc06g0007770 Simmondsia chinensis HOM05D004582 ORTHO05D005507 2.9e-55 218.4 117 83.8
Carub.0008s2444 Capsella rubella HOM05D004582 ORTHO05D005507 3.8e-55 218.0 117 78.6
Sp2g26760 Schrenkiella parvula HOM05D004582 ORTHO05D005507 5.0e-55 217.6 117 78.6
Aa31LG3G17960 Aethionema arabicum HOM05D004582 ORTHO05D005507 6.5e-55 217.2 117 79.5
Thhalv10005155m.g Eutrema salsugineum HOM05D004582 ORTHO05D005507 6.5e-55 217.2 117 78.6
Carub.0006s0753 Capsella rubella HOM05D004582 ORTHO05D005507 8.5e-55 216.9 117 78.6
MD04G1047800 Malus domestica HOM05D004582 ORTHO05D005507 8.5e-55 216.9 118 82.2
MD09G1278200 Malus domestica HOM05D004582 ORTHO05D005507 8.5e-55 216.9 115 80.9
Phvul.003G004200 Phaseolus vulgaris HOM05D004582 ORTHO05D005507 8.5e-55 216.9 117 81.2
Aa31LG10G11080 Aethionema arabicum HOM05D004582 ORTHO05D005507 1.1e-54 216.5 117 77.8
Aa31LG1G18160 Aethionema arabicum HOM05D004582 ORTHO05D005507 1.1e-54 216.5 117 77.8
Glyma.07G274100 Glycine max HOM05D004582 ORTHO05D005507 1.1e-54 216.5 117 81.2
VMungo0251G1823 Vigna mungo HOM05D000329 ORTHO05D002813 1.5e-54 216.1 117 80.3
Psat5g071960 Pisum sativum HOM05D004582 ORTHO05D005507 1.9e-54 215.7 115 80.9
Medtr3g092730 Medicago truncatula HOM05D004582 ORTHO05D005507 2.5e-54 215.3 115 80.9
Medtr3g092770 Medicago truncatula HOM05D004582 ORTHO05D005507 2.5e-54 215.3 115 80.9
Nn8g39808 Nelumbo nucifera HOM05D004582 ORTHO05D005507 2.5e-54 215.3 123 80.5
CARHR278210 Cardamine hirsuta HOM05D004582 ORTHO05D005507 3.2e-54 214.9 117 77.8
MBI11_g25051_MAGBIO Magnolia biondii HOM05D004582 ORTHO05D005507 3.2e-54 214.9 112 82.1
Lj6g0014483 Lotus japonicus HOM05D004582 ORTHO05D005507 5.5e-54 214.2 115 79.1
AL8G40820 Arabidopsis lyrata HOM05D004582 ORTHO05D005507 7.2e-54 213.8 117 77.8
AT5G63670 Arabidopsis thaliana HOM05D004582 ORTHO05D005507 7.2e-54 213.8 117 77.8
BcaB07g29700 Brassica carinata HOM05D004582 ORTHO05D005507 7.2e-54 213.8 117 76.9
MD17G1271200 Malus domestica HOM05D004582 ORTHO05D005507 7.2e-54 213.8 114 79.8
BcaC03g18219 Brassica carinata HOM05D004582 ORTHO05D005507 9.4e-54 213.4 117 76.9
A02p42940 Brassica napus HOM05D004582 ORTHO05D005507 9.4e-54 213.4 117 76.9
C02p62880 Brassica napus HOM05D004582 ORTHO05D005507 9.4e-54 213.4 117 76.9
BraA02t09217Z Brassica rapa HOM05D004582 ORTHO05D005507 9.4e-54 213.4 117 76.9
HanXRQChr15g0475831 Helianthus annuus HOM05D004582 ORTHO05D005507 1.2e-53 213.0 112 85.7
Prupe.3G015100 Prunus persica HOM05D004582 ORTHO05D005507 1.2e-53 213.0 113 81.4
RcHm_v2.0_Chr4g0406241 Rosa chinensis HOM05D004582 ORTHO05D005507 1.2e-53 213.0 115 80.9
unitig_749.g13837 Utricularia gibba HOM05D004582 ORTHO05D005507 1.2e-53 213.0 112 81.2
AL6G19290 Arabidopsis lyrata HOM05D004582 ORTHO05D005507 2.7e-53 211.8 117 76.1
AT5G08565 Arabidopsis thaliana HOM05D004582 ORTHO05D005507 2.7e-53 211.8 117 76.9
Cfa008860 Carpinus fangiana HOM05D002331 ORTHO05D002624 3.6e-53 211.5 175 59.4
Duzib132G0727 Durio zibethinus HOM05D004582 ORTHO05D005507 4.7e-53 211.1 100 94.0
ATR0693G307 Amborella trichopoda HOM05D004582 ORTHO05D005507 6.1e-53 210.7 112 79.5
Gorai.013G066800 Gossypium raimondii HOM05D004582 ORTHO05D005507 1.0e-52 209.9 153 65.4
Sp6g34300 Schrenkiella parvula HOM05D004582 ORTHO05D005507 1.4e-52 209.5 117 76.9
ECA246G1034 Erigeron canadensis HOM05D004582 ORTHO05D005507 2.3e-52 208.8 112 81.2
TPR.G31176 Trifolium pratense HOM05D004582 ORTHO05D005507 5.2e-52 207.6 115 77.4
Aqoxy5G02794 Aquilegia oxysepala HOM05D004582 ORTHO05D005507 6.7e-52 207.2 115 80.0
FvH4_4g10630 Fragaria vesca HOM05D004582 ORTHO05D005507 6.7e-52 207.2 115 79.1
FAN07G0418 Fragaria x ananassa HOM05D004582 ORTHO05D005507 6.7e-52 207.2 115 79.1
FAN12G0218 Fragaria x ananassa HOM05D004582 ORTHO05D005507 6.7e-52 207.2 115 79.1
FAN12G1626 Fragaria x ananassa HOM05D004582 ORTHO05D005507 6.7e-52 207.2 115 79.1
FAN17G0627 Fragaria x ananassa HOM05D004582 ORTHO05D005507 6.7e-52 207.2 115 79.1
Atru.chr6.1863 Acer truncatum HOM05D004582 ORTHO05D005507 8.8e-52 206.8 100 93.0
HPP92_027251 Vanilla planifolia HOM05D004582 ORTHO05D005507 8.8e-52 206.8 116 75.9
BcaB01g05582 Brassica carinata HOM05D004582 ORTHO05D005507 1.5e-51 206.1 117 76.9
ClCG05G012130 Citrullus lanatus HOM05D004582 ORTHO05D005507 1.5e-51 206.1 100 92.0
PSO541G0162 Papaver somniferum HOM05D004582 ORTHO05D005507 3.3e-51 204.9 113 79.6
PSO675G8561 Papaver somniferum HOM05D004582 ORTHO05D005507 3.3e-51 204.9 113 79.6
BcaB01g05655 Brassica carinata HOM05D004582 ORTHO05D005507 4.4e-51 204.5 117 76.1
A03p03980 Brassica napus HOM05D004582 ORTHO05D005507 4.4e-51 204.5 117 76.1
C03p04450 Brassica napus HOM05D004582 ORTHO05D005507 4.4e-51 204.5 117 76.1
Atru.chr11.31 Acer truncatum HOM05D004582 ORTHO05D005507 9.7e-51 203.4 100 91.0
Aqoxy3G01747 Aquilegia oxysepala HOM05D004582 ORTHO05D005507 1.3e-50 203.0 115 78.3
Os07g0623400 Oryza sativa ssp. japonica HOM05D004582 ORTHO05D005507 2.8e-50 201.8 116 73.3
SEGI_05202 Sequoiadendron giganteum HOM05D004582 ORTHO05D005507 1.1e-49 199.9 115 73.9
SGA_v2.0_scaffold417G51254 Striga asiatica HOM05D004582 ORTHO05D005507 1.1e-49 199.9 99 88.9
COL.COLO4_33156 Corchorus olitorius HOM05D004582 ORTHO05D005507 1.4e-49 199.5 100 87.0
AUR62032890 Chenopodium quinoa HOM05D004582 ORTHO05D005507 4.1e-49 198.0 115 77.4
DCAR_026806 Daucus carota HOM05D004582 ORTHO05D005507 7.0e-49 197.2 100 89.0
FAN22G0072 Fragaria x ananassa HOM05D004582 ORTHO05D005507 2.7e-48 195.3 113 77.9
PSO339G5842 Papaver somniferum HOM05D004582 ORTHO05D005507 2.7e-48 195.3 113 75.2
SalBow6G4393 Salvia bowleyana HOM05D004582 ORTHO05D005507 2.2e-47 192.2 115 71.3
SalBow8G4232 Salvia bowleyana HOM05D004582 ORTHO05D005507 2.2e-47 192.2 115 71.3
CDE07G1374 Ceratophyllum demersum HOM05D004582 ORTHO05D005507 4.2e-46 188.0 95 87.4
SGA_v2.0_scaffold14G06942 Striga asiatica HOM05D004582 ORTHO05D005507 8.0e-45 183.7 143 59.4
Dinv17660 Davidia involucrata HOM05D004582 ORTHO05D005507 1.8e-44 182.6 96 86.5
HanXRQChr01g0026751 Helianthus annuus HOM05D004582 ORTHO05D005507 5.2e-44 181.0 110 68.2
HanXRQChr01g0026901 Helianthus annuus HOM05D004582 ORTHO05D005507 5.2e-44 181.0 110 68.2
BolC2t12361H Brassica oleracea HOM05D004582 ORTHO05D005507 1.5e-43 179.5 128 64.1
AagrBONN_evm.TU.Sc2ySwM_344.5487 Anthoceros agrestis HOM05D004582 ORTHO05D005507 2.0e-43 179.1 107 68.2
Pp3c6_2640 Physcomitrium patens HOM05D004582 ORTHO05D005507 2.8e-42 175.3 107 67.3
Mapoly0166s0006 Marchantia polymorpha HOM05D004582 ORTHO05D005507 1.8e-41 172.6 113 66.4
Mapoly0092s0011 Marchantia polymorpha HOM05D004582 ORTHO05D005507 1.2e-40 169.9 112 62.5
SMO358G0649 Selaginella moellendorffii HOM05D004582 ORTHO05D005507 1.2e-40 169.9 108 66.7
Oeu002508.1 Olea europaea HOM05D004582 ORTHO05D005507 2.7e-40 168.7 82 89.0
Ah.11g040470 Amaranthus hybridus HOM05D004582 ORTHO05D005507 4.5e-40 167.9 129 63.6
QL03p073673 Quercus lobata HOM05D004582 ORTHO05D005507 5.0e-39 164.5 75 94.7
CiPaw.05G123600 Carya illinoinensis HOM05D004582 ORTHO05D005507 1.9e-38 162.5 79 91.1
Oeu039967.1 Olea europaea HOM05D004582 ORTHO05D005507 5.5e-38 161.0 79 88.6
CARHR204400 Cardamine hirsuta HOM05D004582 ORTHO05D005507 9.5e-38 160.2 97 70.1
EL10Ac9g23021 Beta vulgaris HOM05D004582 ORTHO05D005507 3.6e-37 158.3 79 91.1
ATR0772G012 Amborella trichopoda HOM05D004582 ORTHO05D005507 8.9e-36 153.7 74 87.8
Thhalv10015347m.g Eutrema salsugineum HOM05D004582 ORTHO05D005507 4.4e-35 151.4 79 83.5
SEGI_39424 Sequoiadendron giganteum HOM05D004582 ORTHO05D005507 8.3e-34 147.1 80 80.0
Sabra10G0198500 Salix brachista HOM05D004582 ORTHO05D005507 4.3e-30 134.8 104 67.3
Sc06g0007290 Simmondsia chinensis HOM05D004582 ORTHO05D005507 5.6e-30 134.4 100 71.0
MCO11G500 Micromonas commoda HOM05D004582 ORTHO05D005507 2.1e-29 132.5 100 53.0
CBR_g44398 Chara braunii HOM05D004582 ORTHO05D005507 4.7e-29 131.3 92 59.8
PRCOL_00005197 Prasinoderma coloniale HOM05D004582 ORTHO05D005507 3.4e-27 125.2 105 49.5
Nitab4.5_0008730g0050 Nicotiana tabacum HOM05D004582 ORTHO05D005507 1.4e-25 119.8 80 76.2
Nitab4.5_0000129g0060 Nicotiana tabacum HOM05D004582 ORTHO05D005507 7.8e-24 114.0 80 71.2
Lj5g0002326 Lotus japonicus HOM05D004582 ORTHO05D005507 1.2e-21 106.7 91 57.1
Lj5g0003678 Lotus japonicus HOM05D004582 ORTHO05D005507 1.2e-21 106.7 91 57.1
Lj5g0005298 Lotus japonicus HOM05D004582 ORTHO05D005507 1.2e-21 106.7 91 57.1
MD07G1114100 Malus domestica HOM05D004582 ORTHO05D005507 2.9e-18 95.5 58 67.2
BcaB01g05656 Brassica carinata HOM05D000467 ORTHO05D000379 3.7e-18 95.1 61 72.1
Cre02.g116300 Chlamydomonas reinhardtii HOM05D004582 ORTHO05D005507 6.4e-18 94.4 98 42.9
Haze_11883 Corylus avellana HOM05D004582 ORTHO05D005507 1.2e-16 90.1 81 58.0
Haze_26483 Corylus avellana HOM05D004582 ORTHO05D005507 2.1e-16 89.4 88 44.3
Rhsim12G0090000 Rhododendron simsii HOM05D004582 ORTHO05D005507 3.5e-16 88.6 151 37.7
Lsat_1_v5_gn_1_108420 Lactuca sativa HOM05D004582 ORTHO05D005507 4.7e-13 78.2 41 85.4
Cfa023443 Carpinus fangiana HOM05D004582 ORTHO05D123741 1.8e-12 76.3 83 41.0
Cpa.g.sc887.1 Carica papaya HOM05D004582 ORTHO05D005507 9.9e-11 70.5 37 81.1
Nitab4.5_0011163g0030 Nicotiana tabacum HOM05D004582 ORTHO05D005507 3.7e-10 68.6 80 51.2


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