Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen03g025440 Solanum pennellii HOM05D000024 ORTHO05D000022 1.5e-143 513.1 313 100.0
CAN.G520.11 Capsicum annuum HOM05D000741 ORTHO05D000506 2.6e-18 97.1 88 47.7
PGSC0003DMG400001167 Solanum tuberosum HOM05D000024 ORTHO05D000007 5.0e-17 92.8 222 34.7
PGSC0003DMG400046872 Solanum tuberosum HOM05D000003 ORTHO05D000022 8.5e-17 92.0 88 40.9
PGSC0003DMG400035850 Solanum tuberosum HOM05D000003 ORTHO05D000022 1.1e-16 91.7 89 39.3
Sopen11g008140 Solanum pennellii HOM05D000024 ORTHO05D000022 3.6e-15 86.7 88 39.8
Sopen11g008100 Solanum pennellii HOM05D000003 ORTHO05D000004 1.0e-14 85.1 88 36.4
Sopen01g026920 Solanum pennellii HOM05D000003 ORTHO05D000022 1.4e-14 84.7 88 35.2
Sopen08g015240 Solanum pennellii HOM05D000003 ORTHO05D000004 2.3e-14 84.0 88 34.1
Sopen09g015010 Solanum pennellii HOM05D000003 ORTHO05D000022 2.3e-14 84.0 88 36.4
Sopen09g016340 Solanum pennellii HOM05D000004 ORTHO05D000002 5.1e-14 82.8 88 37.5
PGSC0003DMG400043208 Solanum tuberosum HOM05D000003 ORTHO05D000022 5.1e-14 82.8 89 39.3
Sopen00g003540 Solanum pennellii HOM05D000003 ORTHO05D000004 1.1e-13 81.6 89 33.7
Sopen07g013710 Solanum pennellii HOM05D000003 ORTHO05D000004 1.5e-13 81.3 88 36.4
Sopen00g003390 Solanum pennellii HOM05D000003 ORTHO05D000004 2.0e-13 80.9 88 34.1
PGSC0003DMG400035792 Solanum tuberosum HOM05D000155 ORTHO05D000022 3.3e-13 80.1 67 47.8
Sopen04g007290 Solanum pennellii HOM05D000003 ORTHO05D000006 4.3e-13 79.7 86 37.2
Sopen08g015180 Solanum pennellii HOM05D000003 ORTHO05D000004 4.3e-13 79.7 88 34.1
Sopen05g017710 Solanum pennellii HOM05D000003 ORTHO05D000004 9.7e-13 78.6 88 31.8
Sopen04g014310 Solanum pennellii HOM05D000155 ORTHO05D000022 4.8e-12 76.3 72 37.5
Sopen02g039300 Solanum pennellii HOM05D000003 ORTHO05D000004 8.2e-12 75.5 88 33.0
Sopen06g007150 Solanum pennellii HOM05D000003 ORTHO05D000004 8.2e-12 75.5 88 33.0
Cc00_g20180 Coffea canephora HOM05D000155 ORTHO05D000022 1.1e-11 75.1 87 31.0
Sopen08g015270 Solanum pennellii HOM05D000003 ORTHO05D009932 1.1e-11 75.1 72 40.3
Sopen09g012310 Solanum pennellii HOM05D000003 ORTHO05D000004 1.4e-11 74.7 79 38.0
Sopen08g024310 Solanum pennellii HOM05D000003 ORTHO05D000006 1.8e-11 74.3 88 31.8
Sopen00g001090 Solanum pennellii HOM05D000003 ORTHO05D000004 2.4e-11 73.9 88 34.1
Nitab4.5_0000335g0260 Nicotiana tabacum HOM05D000003 ORTHO05D000004 5.3e-11 72.8 83 34.9
Sopen11g015660 Solanum pennellii HOM05D000003 ORTHO05D023159 9.1e-11 72.0 62 45.2
Sopen02g008700 Solanum pennellii HOM05D000003 ORTHO05D000022 1.2e-10 71.6 83 37.3
Sopen00g003380 Solanum pennellii HOM05D000155 ORTHO05D000022 2.6e-10 70.5 65 38.5
Sopen11g008050 Solanum pennellii HOM05D000155 ORTHO05D000022 5.9e-10 69.3 68 42.6
Nitab4.5_0000102g0370 Nicotiana tabacum HOM05D000024 ORTHO05D000007 7.7e-10 68.9 35 85.7
Nitab4.5_0005029g0020 Nicotiana tabacum HOM05D011511 ORTHO05D000022 1.0e-09 68.6 67 41.8
Sopen08g015250 Solanum pennellii HOM05D000003 ORTHO05D000006 1.3e-09 68.2 88 34.1
PGSC0003DMG400045895 Solanum tuberosum HOM05D000155 ORTHO05D000022 1.7e-09 67.8 64 39.1
Cc00_g21050 Coffea canephora HOM05D000155 ORTHO05D000022 3.8e-09 66.6 68 35.3
Sopen01g023890 Solanum pennellii HOM05D000003 ORTHO05D015569 3.8e-09 66.6 72 37.5
Sopen09g009790 Solanum pennellii HOM05D000155 ORTHO05D000022 3.8e-09 66.6 59 44.1
Sopen11g008090 Solanum pennellii HOM05D000024 ORTHO05D000006 3.8e-09 66.6 65 41.5
Nitab4.5_0001783g0100 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.5e-08 63.9 36 72.2
CAN.G2306.1 Capsicum annuum HOM05D000003 ORTHO05D000004 3.2e-08 63.5 56 44.6
Nitab4.5_0000090g0290 Nicotiana tabacum HOM05D000024 ORTHO05D000007 7.2e-08 62.4 36 69.4
Nitab4.5_0005934g0070 Nicotiana tabacum HOM05D011511 ORTHO05D000022 7.2e-08 62.4 62 45.2
Nitab4.5_0005210g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 9.4e-08 62.0 44 61.4
Sopen11g024980 Solanum pennellii HOM05D011511 ORTHO05D000022 9.4e-08 62.0 67 38.8
Nitab4.5_0000087g0060 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.1e-07 60.8 36 66.7
Nitab4.5_0000149g0090 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.1e-07 60.8 36 66.7
Nitab4.5_0005065g0050 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.1e-07 60.8 36 66.7
Cc11_g02100 Coffea canephora HOM05D000003 ORTHO05D000022 2.7e-07 60.5 72 38.9
Nitab4.5_0000173g0080 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.7e-07 60.5 38 60.5
Nitab4.5_0002053g0110 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.7e-07 60.5 30 80.0
Nitab4.5_0005049g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.7e-07 60.5 36 63.9
PGSC0003DMG400043370 Solanum tuberosum HOM05D000003 ORTHO05D006296 3.6e-07 60.1 83 30.1
Cc00_g24940 Coffea canephora HOM05D000155 ORTHO05D000022 4.7e-07 59.7 57 38.6
Cc06_g22510 Coffea canephora HOM05D000155 ORTHO05D000022 4.7e-07 59.7 57 38.6
Nitab4.5_0003185g0110 Nicotiana tabacum HOM05D000024 ORTHO05D000007 4.7e-07 59.7 29 79.3
Nitab4.5_0007582g0050 Nicotiana tabacum HOM05D000024 ORTHO05D000007 4.7e-07 59.7 36 66.7
Nitab4.5_0008753g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 6.1e-07 59.3 36 61.1
Nitab4.5_0000679g0120 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.0e-06 58.5 34 73.5
Nitab4.5_0002289g0140 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.0e-06 58.5 36 58.3
Nitab4.5_0002977g0050 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.0e-06 58.5 30 80.0
Nitab4.5_0007450g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.4e-06 58.2 36 61.1
Nitab4.5_0000188g0040 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.8e-06 57.8 36 69.4
Nitab4.5_0000261g0100 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.8e-06 57.8 36 66.7
Nitab4.5_0000465g0050 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.3e-06 57.4 40 62.5
Nitab4.5_0000654g0140 Nicotiana tabacum HOM05D000155 ORTHO05D000022 2.3e-06 57.4 71 35.2
Nitab4.5_0001667g0040 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.3e-06 57.4 36 58.3
Nitab4.5_0006350g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.3e-06 57.4 30 73.3
Nitab4.5_0009190g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.3e-06 57.4 29 79.3
Nitab4.5_0000175g0280 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.0e-06 57.0 28 78.6
Nitab4.5_0001146g0240 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.0e-06 57.0 36 63.9
Nitab4.5_0003374g0090 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.0e-06 57.0 36 63.9
PGSC0003DMG402018748 Solanum tuberosum HOM05D000003 ORTHO05D000004 3.0e-06 57.0 74 31.1
Nitab4.5_0000171g0130 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.9e-06 56.6 105 35.2
Nitab4.5_0001286g0100 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.9e-06 56.6 34 61.8
Nitab4.5_0001987g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.9e-06 56.6 29 75.9
Nitab4.5_0005517g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.9e-06 56.6 40 62.5
Nitab4.5_0008745g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.9e-06 56.6 36 61.1
Nitab4.5_0000410g0260 Nicotiana tabacum HOM05D000024 ORTHO05D000007 5.1e-06 56.2 36 63.9
Nitab4.5_0000947g0050 Nicotiana tabacum HOM05D000024 ORTHO05D000007 5.1e-06 56.2 30 76.7
Nitab4.5_0002157g0090 Nicotiana tabacum HOM05D000024 ORTHO05D000007 5.1e-06 56.2 36 58.3
Nitab4.5_0002586g0140 Nicotiana tabacum HOM05D000024 ORTHO05D000007 5.1e-06 56.2 30 73.3
Nitab4.5_0003255g0040 Nicotiana tabacum HOM05D000024 ORTHO05D000007 5.1e-06 56.2 36 63.9
Nitab4.5_0000026g0080 Nicotiana tabacum HOM05D000024 ORTHO05D000007 6.7e-06 55.8 35 65.7
Nitab4.5_0000468g0080 Nicotiana tabacum HOM05D000024 ORTHO05D000007 6.7e-06 55.8 99 35.4
Sopen09g027800 Solanum pennellii HOM05D000006 ORTHO05D000001 8.8e-06 55.5 75 28.0


User provided reference genes

Program Settings