Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc02g082030.3 Solanum lycopersicum HOM05D002112 ORTHO05D005830 3.5e-214 748.0 390 100.0
Sopen02g026670 Solanum pennellii HOM05D002112 ORTHO05D005830 3.5e-214 748.0 390 100.0
PGSC0003DMG400007324 Solanum tuberosum HOM05D002112 ORTHO05D005830 4.5e-209 731.1 389 97.4
Nitab4.5_0000632g0010 Nicotiana tabacum HOM05D002112 ORTHO05D005830 1.2e-198 696.4 390 90.8
CAN.G809.29 Capsicum annuum HOM05D002112 ORTHO05D005830 9.4e-191 670.2 399 87.7
Peaxi162Scf00036g02120 Petunia axillaris HOM05D002112 ORTHO05D005830 6.1e-190 667.5 390 88.5
Peaxi162Scf00276g01115 Petunia axillaris HOM05D002112 ORTHO05D005830 4.5e-177 624.8 432 77.8
Lj2A342T117 Lonicera japonica HOM05D002112 ORTHO05D005830 3.4e-164 582.0 392 76.5
Nitab4.5_0003902g0080 Nicotiana tabacum HOM05D002112 ORTHO05D005830 7.7e-161 570.9 341 86.8
CiPaw.01G095700 Carya illinoinensis HOM05D002112 ORTHO05D005830 5.0e-160 568.2 390 76.2
Atru.chr4.1269 Acer truncatum HOM05D002112 ORTHO05D005830 1.1e-159 567.0 390 73.8
Haze_01451 Corylus avellana HOM05D002112 ORTHO05D005830 1.5e-159 566.6 390 75.1
Dinv17874 Davidia involucrata HOM05D002112 ORTHO05D005830 3.6e-158 562.0 389 74.8
Lj6g0007258 Lotus japonicus HOM05D002112 ORTHO05D005830 5.7e-156 554.7 390 72.3
GSVIVG01010853001 Vitis vinifera HOM05D002112 ORTHO05D005830 1.4e-154 550.1 393 72.0
QL10p051275 Quercus lobata HOM05D002112 ORTHO05D005830 4.1e-154 548.5 393 72.8
Cc09_g04780 Coffea canephora HOM05D002112 ORTHO05D005830 1.6e-153 546.6 394 73.6
Sc19g0002800 Simmondsia chinensis HOM05D002112 ORTHO05D005830 2.7e-153 545.8 394 72.3
Ciclev10020598m.g Citrus clementina HOM05D002112 ORTHO05D005830 3.5e-153 545.4 389 71.0
Lalb_Chr17g0347631 Lupinus albus HOM05D002112 ORTHO05D005830 1.3e-152 543.5 391 70.3
Duzib151G0469 Durio zibethinus HOM05D002112 ORTHO05D005830 2.9e-152 542.3 394 71.6
Sabra17G0015800 Salix brachista HOM05D002112 ORTHO05D005830 3.9e-152 542.0 392 72.4
Ca_04336_v3 Cicer arietinum L. HOM05D002112 ORTHO05D005830 1.1e-151 540.4 391 71.4
Sabra17G0000800 Salix brachista HOM05D002112 ORTHO05D005830 1.9e-151 539.7 392 72.2
Actinidia22156 Actinidia chinensis HOM05D002112 ORTHO05D005830 2.3e-149 532.7 388 71.9
Thecc.04G174100 Theobroma cacao HOM05D002112 ORTHO05D005830 2.3e-149 532.7 391 69.8
HanXRQChr12g0380031 Helianthus annuus HOM05D002112 ORTHO05D005830 3.1e-149 532.3 390 71.0
RcHm_v2.0_Chr2g0118821 Rosa chinensis HOM05D002112 ORTHO05D005830 3.1e-149 532.3 391 70.8
TWI38G0996 Tripterygium wilfordii HOM05D002112 ORTHO05D005830 3.1e-149 532.3 391 71.1
Thhalv10020922m.g Eutrema salsugineum HOM05D002112 ORTHO05D005830 6.8e-149 531.2 355 75.8
Lalb_Chr04g0249531 Lupinus albus HOM05D002112 ORTHO05D005830 9.8e-148 527.3 392 68.1
Manes.04G047300 Manihot esculenta HOM05D002112 ORTHO05D005830 9.8e-148 527.3 392 69.1
Prupe.1G198700 Prunus persica HOM05D002112 ORTHO05D005830 9.8e-148 527.3 354 74.6
DCAR_007772 Daucus carota HOM05D002112 ORTHO05D005830 2.2e-147 526.2 388 70.1
ECA246G0582 Erigeron canadensis HOM05D002112 ORTHO05D005830 2.2e-147 526.2 326 80.4
HanXRQChr02g0033051 Helianthus annuus HOM05D002112 ORTHO05D005830 2.9e-147 525.8 367 73.0
TAR369G0031 Trochodendron aralioides HOM05D002112 ORTHO05D005830 2.9e-147 525.8 354 74.9
COL.COLO4_08219 Corchorus olitorius HOM05D002112 ORTHO05D005830 4.9e-147 525.0 390 71.0
Potri.007G131700 Populus trichocarpa HOM05D002112 ORTHO05D005830 6.4e-147 524.6 390 70.0
Gohir.D10G126900 Gossypium hirsutum HOM05D002112 ORTHO05D005830 1.1e-146 523.9 394 68.8
Potri.017G026100 Populus trichocarpa HOM05D002112 ORTHO05D005830 1.1e-146 523.9 390 69.7
MD04G1045800 Malus domestica HOM05D002112 ORTHO05D005830 3.2e-146 522.3 389 69.4
Migut.M02025 Erythranthe guttata HOM05D002112 ORTHO05D005830 4.1e-146 521.9 389 68.9
VMungo0540G0891 Vigna mungo HOM05D002112 ORTHO05D005830 4.1e-146 521.9 354 72.9
Gohir.A10G139900 Gossypium hirsutum HOM05D002112 ORTHO05D005830 5.4e-146 521.5 394 68.5
Gorai.011G139800 Gossypium raimondii HOM05D002112 ORTHO05D005830 5.4e-146 521.5 394 68.8
AUR62031652 Chenopodium quinoa HOM05D002112 ORTHO05D005830 1.2e-145 520.4 390 69.5
Sabra07G0106900 Salix brachista HOM05D002112 ORTHO05D005830 1.2e-145 520.4 389 69.7
Sabra07G0118800 Salix brachista HOM05D002112 ORTHO05D005830 1.2e-145 520.4 389 69.7
Sp3g18350 Schrenkiella parvula HOM05D002112 ORTHO05D005830 3.5e-145 518.8 354 74.6
CANSAT78G1637 Cannabis sativa HOM05D002112 ORTHO05D005830 4.6e-145 518.5 354 72.9
CARHR095970 Cardamine hirsuta HOM05D002112 ORTHO05D005830 4.6e-145 518.5 393 69.0
THA.LOC104817851 Tarenaya hassleriana HOM05D002112 ORTHO05D005830 4.6e-145 518.5 393 68.4
Carub.0003s2027 Capsella rubella HOM05D002112 ORTHO05D005830 6.0e-145 518.1 393 70.0
BcaC05g28317 Brassica carinata HOM05D002112 ORTHO05D005377 1.3e-144 516.9 386 68.7
C05p44010 Brassica napus HOM05D002112 ORTHO05D005377 2.3e-144 516.2 350 74.0
BolC5t33124H Brassica oleracea HOM05D002112 ORTHO05D005830 3.0e-144 515.8 386 68.7
Actinidia04201 Actinidia chinensis HOM05D002112 ORTHO05D005830 3.9e-144 515.4 420 66.7
arahy.Tifrunner.gnm1.ann1.PNXW1P Arachis hypogaea HOM05D002112 ORTHO05D005830 5.0e-144 515.0 388 67.8
A05p28600 Brassica napus HOM05D002112 ORTHO05D005377 8.6e-144 514.2 386 68.4
BraA05t21737Z Brassica rapa HOM05D002112 ORTHO05D005377 8.6e-144 514.2 386 68.4
arahy.Tifrunner.gnm1.ann1.9N9T88 Arachis hypogaea HOM05D002112 ORTHO05D005830 1.1e-143 513.8 388 67.8
vmacro13897 Vaccinium macrocarpon HOM05D002112 ORTHO05D005830 1.1e-143 513.8 391 69.3
Glyma.13G074600 Glycine max HOM05D002112 ORTHO05D005830 1.5e-143 513.5 354 71.5
Rhsim07G0082300 Rhododendron simsii HOM05D002112 ORTHO05D005830 2.5e-143 512.7 392 69.6
Glyma.20G048400 Glycine max HOM05D002112 ORTHO05D005830 4.3e-143 511.9 354 71.8
AL3G34040 Arabidopsis lyrata HOM05D002112 ORTHO05D005830 5.6e-143 511.5 393 69.2
Nn2g10363 Nelumbo nucifera HOM05D002112 ORTHO05D005830 7.3e-143 511.1 354 72.3
Medtr3g040090 Medicago truncatula HOM05D002112 ORTHO05D005830 1.2e-142 510.4 391 67.0
Phvul.006G021000 Phaseolus vulgaris HOM05D002112 ORTHO05D005830 1.2e-142 510.4 387 66.7
TPR.G11324 Trifolium pratense HOM05D002112 ORTHO05D005830 2.1e-142 509.6 389 65.8
Medtr5g088340 Medicago truncatula HOM05D002112 ORTHO05D005830 8.1e-142 507.7 389 65.3
FAN26G0200 Fragaria x ananassa HOM05D002112 ORTHO05D005830 1.1e-141 507.3 391 68.3
FvH4_1g23450 Fragaria vesca HOM05D002112 ORTHO05D005830 1.4e-141 506.9 391 68.0
FAN19G2557 Fragaria x ananassa HOM05D002112 ORTHO05D005830 1.4e-141 506.9 391 68.0
FAN23G2661 Fragaria x ananassa HOM05D002112 ORTHO05D005830 1.8e-141 506.5 391 68.0
Aa31LG8G7130 Aethionema arabicum HOM05D002112 ORTHO05D005830 6.8e-141 504.6 395 67.3
Aqoxy7G04120 Aquilegia oxysepala HOM05D002112 ORTHO05D005830 6.8e-141 504.6 379 69.1
Ca_06168_v3 Cicer arietinum L. HOM05D002112 ORTHO05D005830 6.8e-141 504.6 386 65.0
Ca_06185_v3 Cicer arietinum L. HOM05D002112 ORTHO05D005830 6.8e-141 504.6 386 65.0
MBI14_g20102_MAGBIO Magnolia biondii HOM05D002112 ORTHO05D005830 3.4e-140 502.3 394 64.7
Eucgr.I00215 Eucalyptus grandis HOM05D002112 ORTHO05D005830 1.4e-138 496.9 394 66.5
SalBow5G0693 Salvia bowleyana HOM05D002112 ORTHO05D005830 1.9e-138 496.5 359 69.9
BolC1t04335H Brassica oleracea HOM05D002112 ORTHO05D005377 4.1e-138 495.4 354 70.1
QL11p031638 Quercus lobata HOM05D002112 ORTHO05D005830 7.1e-138 494.6 393 63.4
MELO3C015704.2 Cucumis melo HOM05D002112 ORTHO05D005830 1.2e-137 493.8 393 66.2
PSO339G3553 Papaver somniferum HOM05D002112 ORTHO05D005830 1.2e-137 493.8 354 69.8
BcaB04g20660 Brassica carinata HOM05D002112 ORTHO05D005830 3.5e-137 492.3 347 71.5
Dinv21066 Davidia involucrata HOM05D002112 ORTHO05D005830 1.0e-136 490.7 390 66.9
BcaC09g48987 Brassica carinata HOM05D002112 ORTHO05D005377 3.0e-136 489.2 350 69.4
unitig_748.g7486 Utricularia gibba HOM05D002112 ORTHO05D005830 5.1e-136 488.4 354 69.5
Psat2g021160 Pisum sativum HOM05D002112 ORTHO05D005830 7.3e-135 484.6 394 61.7
C01p43770 Brassica napus HOM05D002112 ORTHO05D005830 9.5e-135 484.2 350 69.1
SGA_v2.0_scaffold16G07839 Striga asiatica HOM05D002112 ORTHO05D005830 8.9e-133 477.6 500 53.6
Phvul.008G205800 Phaseolus vulgaris HOM05D002112 ORTHO05D005830 2.0e-132 476.5 388 63.4
ATR0559G336 Amborella trichopoda HOM05D002112 ORTHO05D005830 9.9e-132 474.2 393 62.1
CiPaw.06G167000 Carya illinoinensis HOM05D002112 ORTHO05D005830 1.7e-131 473.4 390 63.1
Glyma.14G040300 Glycine max HOM05D002112 ORTHO05D005830 2.2e-131 473.0 391 61.9
EL10Ac2g03438 Beta vulgaris HOM05D002112 ORTHO05D005830 1.9e-130 469.9 354 69.5
VMungo0647G1998 Vigna mungo HOM05D002112 ORTHO05D005830 6.6e-128 461.5 391 61.6
DCAR_003742 Daucus carota HOM05D002112 ORTHO05D005830 8.1e-126 454.5 360 64.7
Lsat_1_v5_gn_3_102740 Lactuca sativa HOM05D002112 ORTHO05D005830 1.4e-125 453.8 343 70.3
Duzib212G0454 Durio zibethinus HOM05D002112 ORTHO05D005830 2.6e-124 449.5 389 62.0
Haze_10243 Corylus avellana HOM05D002112 ORTHO05D005830 4.4e-124 448.7 308 72.7
ClCG09G018870 Citrullus lanatus HOM05D002112 ORTHO05D005830 5.8e-124 448.4 473 55.2
Zm00001eb362140 Zea mays HOM05D002112 ORTHO05D005830 2.2e-123 446.4 356 62.9
BraA01t03533Z Brassica rapa HOM05D002112 ORTHO05D005830 2.9e-123 446.0 354 66.1
Ah.14g085620 Amaranthus hybridus HOM05D002112 ORTHO05D005830 6.4e-123 444.9 393 62.1
Hma1.2p1_2907F.1_g330140 Hydrangea macrophylla HOM05D002112 ORTHO05D005830 6.4e-123 444.9 293 75.1
Os01g0974000 Oryza sativa ssp. japonica HOM05D002112 ORTHO05D005830 1.3e-120 437.2 307 68.4
SEGI_07155 Sequoiadendron giganteum HOM05D002112 ORTHO05D005830 1.4e-117 427.2 339 62.2
CDE08G1601 Ceratophyllum demersum HOM05D002112 ORTHO05D005830 2.4e-117 426.4 390 58.7
vmacro12410 Vaccinium macrocarpon HOM05D002112 ORTHO05D005830 1.3e-115 420.6 271 80.1
Gohir.A02G114100 Gossypium hirsutum HOM05D002112 ORTHO05D005830 1.9e-114 416.8 333 65.2
BcaB06g26098 Brassica carinata HOM05D002112 ORTHO05D005377 3.6e-110 402.5 329 63.5
Oeu010462.1 Olea europaea HOM05D002112 ORTHO05D005830 3.1e-109 399.4 291 69.4
Lj1A1151T82 Lonicera japonica HOM05D002112 ORTHO05D005830 5.8e-108 395.2 290 67.9
Gohir.A08G075500 Gossypium hirsutum HOM05D002112 ORTHO05D005830 9.3e-106 387.9 294 68.0
CsaV3_7G002030 Cucumis sativus L. HOM05D002112 ORTHO05D005830 1.6e-105 387.1 254 75.2
Peaxi162Scf00580g00069 Petunia axillaris HOM05D002112 ORTHO05D005830 1.6e-105 387.1 243 81.5
ClCG02G003310 Citrullus lanatus HOM05D002112 ORTHO05D005830 2.1e-105 386.7 274 71.5
HPP92_018143 Vanilla planifolia HOM05D002112 ORTHO05D005830 4.6e-105 385.6 359 56.3
MSTRG.24953 Avicennia marina HOM05D002112 ORTHO05D005830 7.9e-105 384.8 260 73.8
Mapoly0038s0049 Marchantia polymorpha HOM05D002112 ORTHO05D005830 1.1e-103 380.9 342 54.4
Sed0017575 Sechium edule HOM05D002112 ORTHO05D005830 7.4e-103 378.3 293 66.2
PSO151G0006 Papaver somniferum HOM05D002112 ORTHO05D005830 2.8e-102 376.3 398 53.5
Pp3c12_4060 Physcomitrium patens HOM05D002112 ORTHO05D005830 4.0e-101 372.5 345 54.8
Pp3c3_12480 Physcomitrium patens HOM05D002112 ORTHO05D005830 6.5e-99 365.2 348 51.7
AT3G20320 Arabidopsis thaliana HOM05D002112 ORTHO05D005830 1.9e-98 363.6 254 72.4
SMO356G0377 Selaginella moellendorffii HOM05D002112 ORTHO05D005830 5.5e-98 362.1 306 56.9
A01p34360 Brassica napus HOM05D002112 ORTHO05D005830 5.1e-96 355.5 255 68.6
CBR_g24153 Chara braunii HOM05D002112 ORTHO05D005830 2.1e-94 350.1 309 53.7
Cfa004646 Carpinus fangiana HOM05D002112 ORTHO05D005830 6.3e-94 348.6 251 67.3
AagrBONN_evm.TU.Sc2ySwM_362.2463 Anthoceros agrestis HOM05D002112 ORTHO05D005830 1.1e-93 347.8 311 55.3
MD13G1257900 Malus domestica HOM05D002112 ORTHO05D005830 2.4e-93 346.7 299 61.5
Psat5g187680 Pisum sativum HOM05D002112 ORTHO05D005830 4.5e-92 342.4 289 63.0
Hund03181 Selenicereus undatus HOM05D002112 ORTHO05D005830 7.6e-92 341.7 279 65.6
SHI29120 Sapria himalayana HOM05D002112 ORTHO05D005830 4.2e-90 335.9 376 48.9
Zm00001eb139760 Zea mays HOM05D002112 ORTHO05D005830 5.5e-90 335.5 208 73.6
TAR623G0168 Trochodendron aralioides HOM05D002112 ORTHO05D005830 2.7e-81 306.6 246 63.8
MCO07G431 Micromonas commoda HOM05D002112 ORTHO05D005830 3.1e-77 293.1 316 48.4
QL02p069440 Quercus lobata HOM05D002112 ORTHO05D005830 5.0e-75 285.8 217 63.6
Cre16.g694400 Chlamydomonas reinhardtii HOM05D002112 ORTHO05D005830 1.1e-69 268.1 300 47.3
PRCOL_00002736 Prasinoderma coloniale HOM05D002112 ORTHO05D005830 5.0e-67 259.2 302 45.7
Sc07g0004100 Simmondsia chinensis HOM05D002112 ORTHO05D005830 1.2e-52 211.5 185 62.7
Glyma.02G275800 Glycine max HOM05D002112 ORTHO05D005830 4.0e-48 196.4 175 57.7
TAR623G1172 Trochodendron aralioides HOM05D002112 ORTHO05D005830 3.1e-45 186.8 128 75.8
Cpa.g.c39485 Carica papaya HOM05D002112 ORTHO05D005830 4.1e-45 186.4 127 71.7
Oeu010464.1 Olea europaea HOM05D002112 ORTHO05D005830 6.4e-38 162.5 104 79.8
Lj1A1151T83 Lonicera japonica HOM05D002112 ORTHO05D005830 5.4e-37 159.5 97 83.5
AUR62038882 Chenopodium quinoa HOM05D002112 ORTHO05D005830 1.2e-36 158.3 97 82.5
Oeu037772.1 Olea europaea HOM05D002112 ORTHO05D005830 1.6e-36 157.9 103 78.6
FAN28G2322 Fragaria x ananassa HOM05D002112 ORTHO05D005830 1.0e-35 155.2 103 74.8
Gohir.A08G072300 Gossypium hirsutum HOM05D002112 ORTHO05D010805 3.0e-27 127.1 102 62.7
MD13G1258100 Malus domestica HOM05D002112 ORTHO05D005830 2.1e-25 120.9 77 79.2
Peaxi162Scf00036g02121 Petunia axillaris HOM05D002112 ORTHO05D005830 1.1e-21 108.6 61 93.4
A01p34370 Brassica napus HOM05D000233 ORTHO05D000020 1.3e-19 101.7 59 83.1
Cre09.g395028 Chlamydomonas reinhardtii HOM05D002112 ORTHO05D143200 1.4e-13 81.6 105 43.8
Sc09g0004030 Simmondsia chinensis HOM05D005136 ORTHO05D006619 7.1e-13 79.3 69 59.4
Sc07g0004110 Simmondsia chinensis HOM05D002112 ORTHO05D010805 1.2e-12 78.6 51 76.5
SEGI_04192 Sequoiadendron giganteum HOM05D002112 ORTHO05D384887 3.4e-07 60.5 60 51.7
Hma1.2p1_1220F.1_g268110 Hydrangea macrophylla HOM05D002112 ORTHO05D005830 5.8e-07 59.7 42 69.0
Hma1.2p1_1220F.1_g268115 Hydrangea macrophylla HOM05D002112 ORTHO05D005830 5.8e-07 59.7 42 69.0
Hma1.2p1_2907F.1_g330145 Hydrangea macrophylla HOM05D002112 ORTHO05D005830 5.8e-07 59.7 42 69.0


User provided reference genes

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